MGE detailed information
MGE type: Genomic_island MGE length: 23783 bp
Accession: NZ_CP031514 Location: 4475143..4498925 Organism: Chromobacterium sp. Rain0013 Replicon: chromosome
Accession: NZ_CP031514 Location: 4475143..4498925 Organism: Chromobacterium sp. Rain0013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXT74_RS20325 () | 4471414..4471722 | - | 309 | WP_194426876.1 | RnfH family protein | - |
| DXT74_RS20330 () | 4471715..4472152 | - | 438 | WP_019103543.1 | type II toxin-antitoxin system RatA family toxin | - |
| DXT74_RS20335 () | 4472358..4472813 | + | 456 | WP_019103542.1 | SsrA-binding protein SmpB | - |
| DXT74_RS20340 () | 4472813..4473166 | + | 354 | WP_019103541.1 | hypothetical protein | - |
| DXT74_RS20345 () | 4473253..4474836 | + | 1584 | WP_114153825.1 | glutamine-hydrolyzing GMP synthase | - |
| DXT74_RS20350 () | 4475143..4476351 | + | 1209 | WP_194426877.1 | Prophage integrase IntA ; Integrase | Integrase |
| DXT74_RS20355 () | 4476326..4476565 | - | 240 | WP_194426878.1 | AlpA family phage regulatory protein | - |
| DXT74_RS20360 () | 4476707..4477681 | - | 975 | WP_196783794.1 | hypothetical protein | - |
| DXT74_RS20365 () | 4477678..4477746 | - | 69 | WP_194428137.1 | hypothetical protein | - |
| DXT74_RS20370 () | 4477772..4477993 | + | 222 | WP_194426880.1 | DNA-binding protein | - |
| DXT74_RS20375 () | 4478009..4478887 | + | 879 | WP_194426881.1 | helicase RepA family protein | - |
| DXT74_RS20380 () | 4478859..4479746 | + | 888 | WP_194426882.1 | replication protein C | - |
| DXT74_RS20385 () | 4480185..4480964 | - | 780 | WP_194426883.1 | hypothetical protein | - |
| DXT74_RS20390 () | 4481142..4481339 | + | 198 | WP_194426884.1 | hypothetical protein | - |
| DXT74_RS20395 () | 4481336..4481572 | + | 237 | WP_194426885.1 | hypothetical protein | - |
| DXT74_RS20400 () | 4481565..4481834 | + | 270 | WP_194426886.1 | TraK family protein | - |
| DXT74_RS20405 () | 4482138..4482509 | + | 372 | WP_194426887.1 | conjugal transfer transcriptional regulator TraJ | - |
| DXT74_RS20410 () | 4482546..4483325 | + | 780 | WP_194426888.1 | P-type conjugative transfer protein TrbJ | - |
| DXT74_RS20415 () | 4483339..4483545 | + | 207 | WP_194426889.1 | hypothetical protein | - |
| DXT74_RS20420 () | 4483550..4485106 | + | 1557 | WP_194426890.1 | P-type conjugative transfer protein TrbL | - |
| DXT74_RS20425 () | 4485125..4485379 | + | 255 | WP_194426891.1 | hypothetical protein | - |
| DXT74_RS20430 () | 4485403..4485525 | + | 123 | Protein_3988 | conjugal transfer protein TraD | - |
| DXT74_RS20440 () | 4485729..4485902 | + | 174 | WP_194426892.1 | hypothetical protein | - |
| DXT74_RS20445 () | 4486010..4486972 | - | 963 | WP_194426893.1 | hypothetical protein | - |
| DXT74_RS20450 () | 4487137..4487514 | + | 378 | WP_194426894.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DXT74_RS20455 () | 4487495..4487830 | + | 336 | WP_194426895.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DXT74_RS20460 () | 4487853..4488530 | + | 678 | WP_194426896.1 | hypothetical protein | - |
| DXT74_RS20465 () | 4488527..4489966 | + | 1440 | WP_194426897.1 | hypothetical protein | - |
| DXT74_RS20470 () | 4490302..4491609 | + | 1308 | WP_019103539.1 | MFS transporter | - |
| DXT74_RS20475 () | 4491746..4492063 | + | 318 | WP_019103538.1 | DUF883 family protein | - |
| DXT74_RS20480 () | 4492067..4492456 | + | 390 | WP_081554271.1 | phage holin family protein | - |
| DXT74_RS20485 () | 4492453..4492734 | + | 282 | WP_019103536.1 | hypothetical protein | - |
| DXT74_RS20490 () | 4492735..4493712 | - | 978 | WP_194426898.1 | hypothetical protein | VF |
| DXT74_RS20495 () | 4493784..4494551 | + | 768 | WP_194426899.1 | tRNA adenosine(34) deaminase TadA | - |
| DXT74_RS20500 () | 4494610..4495212 | + | 603 | WP_114154708.1 | L,D-transpeptidase | - |
| DXT74_RS20505 () | 4495212..4495625 | + | 414 | WP_194426900.1 | DUF2721 domain-containing protein | - |
| DXT74_RS20510 () | 4495767..4496519 | - | 753 | WP_081554275.1 | class I SAM-dependent methyltransferase | - |
| DXT74_RS20530 () | 4497416..4498396 | + | 981 | WP_043632609.1 | recombination-associated protein RdgC | - |
| DXT74_RS20535 () | 4499064..4499843 | + | 780 | WP_194426901.1 | dioxygenase | - |
| DXT74_RS20540 () | 4499840..4500028 | - | 189 | WP_194426902.1 | hypothetical protein | - |
| DXT74_RS20545 () | 4500090..4501094 | - | 1005 | WP_194426903.1 | porphobilinogen synthase | - |
| DXT74_RS20550 () | 4501259..4502764 | - | 1506 | WP_194426904.1 | alanine:cation symporter family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|