MGE detailed information
MGE type: Genomic_island MGE length: 10681 bp
Accession: NZ_CP031507 Location: 2378986..2389666 Organism: Dickeya fangzhongdai strain QZH3 Replicon: chromosome
Accession: NZ_CP031507 Location: 2378986..2389666 Organism: Dickeya fangzhongdai strain QZH3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYD83_RS10580 () | 2374784..2375014 | - | 231 | WP_038658972.1 | DNA polymerase III subunit theta | - |
| DYD83_RS10585 () | 2375175..2375555 | + | 381 | WP_100849511.1 | copper homeostasis periplasmic binding protein CopC | - |
| DYD83_RS10590 () | 2375559..2376461 | + | 903 | WP_100849512.1 | copper homeostasis membrane protein CopD | - |
| DYD83_RS10595 () | 2376744..2377253 | + | 510 | WP_038658962.1 | non-heme ferritin | - |
| DYD83_RS10600 () | 2377756..2378457 | + | 702 | WP_100849513.1 | DNA/RNA non-specific endonuclease | - |
| DYD83_RS10605 () | 2378986..2380125 | - | 1140 | WP_038918967.1 | hypothetical protein | VF |
| DYD83_RS10610 () | 2380118..2381215 | - | 1098 | WP_100849514.1 | HDOD domain-containing protein | - |
| DYD83_RS10615 () | 2381206..2382321 | - | 1116 | WP_100850453.1 | ATP-binding protein | - |
| DYD83_RS10620 () | 2382314..2383438 | - | 1125 | WP_100849515.1 | FIST C-terminal domain-containing protein | - |
| DYD83_RS10625 () | 2383699..2385072 | - | 1374 | WP_167389549.1 | pectate lyase | - |
| DYD83_RS10630 () | 2385769..2386965 | + | 1197 | WP_100849517.1 | hypothetical protein | - |
| - () | 2387527..2387609 | + | 83 | - | - | Antitoxin Detail |
| - () | 2387529..2387609 | - | 81 | - | - | Toxin Detail |
| DYD83_RS10635 () | 2387779..2388117 | - | 339 | WP_038918972.1 | YebY family protein | - |
| DYD83_RS10640 () | 2388632..2389075 | + | 444 | WP_100849518.1 | hypothetical protein | - |
| DYD83_RS10645 () | 2389418..2389666 | + | 249 | WP_100849519.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| DYD83_RS10650 () | 2389781..2391523 | - | 1743 | WP_100849520.1 | ABC transporter permease subunit | - |
| DYD83_RS10655 () | 2391520..2393037 | - | 1518 | WP_100849521.1 | ABC transporter substrate-binding protein | - |
| DYD83_RS10660 () | 2393064..2393879 | - | 816 | WP_100849522.1 | dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|