MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 18372 bp
Accession: NZ_CP031507 Location: 1091376..1109747 Organism: Dickeya fangzhongdai strain QZH3 Replicon: chromosome
Accession: NZ_CP031507 Location: 1091376..1109747 Organism: Dickeya fangzhongdai strain QZH3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYD83_RS05000 () | 1087001..1087807 | + | 807 | WP_100849029.1 | oxidoreductase | - |
| DYD83_RS05005 () | 1088046..1088413 | + | 368 | Protein_969 | GNAT family N-acetyltransferase | - |
| DYD83_RS05010 () | 1088651..1089793 | + | 1143 | WP_100849030.1 | Fic family protein | - |
| DYD83_RS05015 () | 1089777..1089926 | - | 150 | WP_167389533.1 | hypothetical protein | - |
| DYD83_RS05020 () | 1090112..1090330 | - | 219 | WP_049854444.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| DYD83_RS05025 () | 1090345..1090593 | - | 249 | WP_039691666.1 | helix-turn-helix domain-containing protein | - |
| DYD83_RS05030 () | 1090678..1090932 | - | 255 | WP_100850409.1 | helix-turn-helix domain-containing protein | - |
| DYD83_RS05035 () | 1091038..1091280 | + | 243 | WP_100849031.1 | helix-turn-helix domain-containing protein | - |
| DYD83_RS05040 () | 1091627..1091851 | + | 225 | WP_038903497.1 | DUF1778 domain-containing protein | - |
| DYD83_RS05045 () | 1091969..1093093 | + | 1125 | WP_100849032.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DYD83_RS05050 () | 1093345..1095327 | + | 1983 | WP_100849033.1 | site-specific DNA-methyltransferase | - |
| DYD83_RS05055 () | 1095327..1098311 | + | 2985 | WP_100849034.1 | DEAD/DEAH box helicase family protein | - |
| DYD83_RS05060 () | 1098428..1098997 | - | 570 | WP_100849035.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| DYD83_RS05065 () | 1098963..1099175 | - | 213 | WP_023638430.1 | hypothetical protein | - |
| DYD83_RS05070 () | 1099253..1101874 | + | 2622 | WP_100849036.1 | class I SAM-dependent DNA methyltransferase | - |
| DYD83_RS05075 () | 1101867..1103876 | + | 2010 | WP_188726081.1 | ATP-dependent helicase | - |
| DYD83_RS05080 () | 1103878..1105137 | + | 1260 | WP_100849038.1 | GIY-YIG nuclease family protein | - |
| DYD83_RS05085 () | 1105264..1105569 | - | 306 | WP_015854715.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DYD83_RS05090 () | 1105572..1105790 | - | 219 | WP_100849039.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DYD83_RS05095 () | 1105849..1106592 | - | 744 | WP_100849040.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DYD83_RS05100 () | 1107494..1107844 | - | 351 | WP_100849042.1 | hypothetical protein | - |
| DYD83_RS05105 () | 1107967..1108155 | + | 189 | WP_033111580.1 | hypothetical protein | - |
| DYD83_RS05110 () | 1108308..1109570 | - | 1263 | WP_100849043.1 | hypothetical protein ; Integrase | Integrase |
| DYD83_RS05120 () | 1110473..1112626 | + | 2154 | WP_049854445.1 | ornithine decarboxylase | - |
| DYD83_RS05125 () | 1112700..1114157 | - | 1458 | WP_038918049.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|