MGE detailed information
MGE type: Prophage MGE length: 19868 bp
Accession: NZ_CP031505 Location: 460706..480573 Organism: Dickeya fangzhongdai strain LN1 Replicon: chromosome
Accession: NZ_CP031505 Location: 460706..480573 Organism: Dickeya fangzhongdai strain LN1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYD82_RS02145 () | 456229..457737 | - | 1509 | WP_013316104.1 | leucyl aminopeptidase | - |
| DYD82_RS02150 () | 458021..459139 | + | 1119 | WP_049855261.1 | LPS export ABC transporter permease LptF | - |
| DYD82_RS02155 () | 459141..460211 | + | 1071 | WP_100848766.1 | LPS export ABC transporter permease LptG | - |
| DYD82_RS02165 () | 460706..461956 | + | 1251 | WP_100848767.1 | hypothetical protein ; Integrase | Integrase |
| DYD82_RS02170 () | 462019..464415 | - | 2397 | WP_100848768.1 | SIR2 family protein | - |
| DYD82_RS02175 () | 465615..466496 | + | 882 | WP_100848770.1 | Fructose-1,6-bisphosphatase class 1 ; Integrase | Integrase |
| DYD82_RS02180 () | 466499..466699 | + | 201 | WP_188726100.1 | AlpA family transcriptional regulator | - |
| DYD82_RS02185 () | 466696..467235 | + | 540 | WP_100848772.1 | ash family protein | - |
| DYD82_RS02190 () | 467228..469270 | + | 2043 | WP_100848773.1 | AAA family ATPase | - |
| DYD82_RS02195 () | 469493..469759 | - | 267 | WP_013316114.1 | helix-turn-helix domain-containing protein | - |
| DYD82_RS02200 () | 469865..470077 | + | 213 | Protein_418 | transcriptional regulator | - |
| DYD82_RS02205 () | 470222..470623 | - | 402 | WP_100848774.1 | hypothetical protein | - |
| DYD82_RS02210 () | 470652..471131 | - | 480 | WP_015855199.1 | GNAT family N-acetyltransferase | Toxin Detail |
| DYD82_RS02215 () | 471122..471394 | - | 273 | WP_019843650.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| DYD82_RS02220 () | 471660..472778 | + | 1119 | Protein_422 | IS3 family transposase | - |
| DYD82_RS02225 () | 473041..473763 | - | 723 | WP_100848775.1 | methyltransferase domain-containing protein | - |
| DYD82_RS02230 () | 473771..474028 | - | 258 | WP_049855262.1 | YjhX family toxin | - |
| DYD82_RS02235 () | 474481..474819 | - | 339 | WP_100848776.1 | hypothetical protein | - |
| DYD82_RS02240 () | 475207..475905 | - | 699 | WP_145958393.1 | hypothetical protein | - |
| DYD82_RS02245 () | 475924..476918 | - | 995 | Protein_427 | IS3 family transposase IS1400 | Transposase |
| DYD82_RS02250 () | 476985..478007 | + | 1023 | WP_100848778.1 | IS110 family transposase ISSaen1 | Transposase |
| DYD82_RS02255 () | 478226..478342 | - | 117 | Protein_429 | IS3 family transposase IS1351 | Transposase |
| DYD82_RS02260 () | 478568..479173 | - | 606 | WP_145958394.1 | hypothetical protein | - |
| DYD82_RS02265 () | 479454..480257 | + | 804 | WP_100848781.1 | hypothetical protein | - |
| DYD82_RS02270 () | 480620..481465 | + | 846 | WP_100848782.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DYD82_RS02275 () | 481465..482445 | + | 981 | WP_042858441.1 | substrate-binding domain-containing protein | - |
| DYD82_RS02280 () | 482449..483954 | + | 1506 | WP_100848783.1 | sugar ABC transporter ATP-binding protein | - |
| DYD82_RS02285 () | 483947..484936 | + | 990 | WP_038662887.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|