MGE detailed information
MGE type: Mobilizable plasmid MGE length: 88747 bp
Accession: NZ_CP031354 Location: 1..88747 Organism: Escherichia coli O145 strain RM8995-C1 Replicon: plasmid pRM8995-C1
Accession: NZ_CP031354 Location: 1..88747 Organism: Escherichia coli O145 strain RM8995-C1 Replicon: plasmid pRM8995-C1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE49_RS00005 () | 518..1173 | - | 656 | Protein_0 | IS3 family transposase IS629 | Transposase |
| DXE49_RS00010 () | 2648..3469 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| DXE49_RS00015 () | 3469..4575 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| DXE49_RS00020 () | 4669..6390 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| DXE49_RS00025 () | 6464..7462 | + | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DXE49_RS00030 () | 7515..7703 | + | 189 | Protein_5 | hypothetical protein | - |
| DXE49_RS00035 () | 7766..9304 | - | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| DXE49_RS00040 () | 9354..9701 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| DXE49_RS00045 () | 9938..10303 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| DXE49_RS00050 () | 10303..11490 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| DXE49_RS00055 () | 11769..13321 | - | 1553 | Protein_10 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00060 () | 13341..13688 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00065 () | 13685..14371 | - | 687 | WP_001370221.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00070 () | 14334..14708 | + | 375 | WP_188310427.1 | DUF1449 family protein | - |
| DXE49_RS00075 () | 14756..14968 | - | 213 | Protein_14 | IS3 family transposase ISSfl10 | Transposase |
| DXE49_RS00080 () | 15030..15203 | + | 174 | Protein_15 | IS66 family transposase | - |
| DXE49_RS00085 () | 15646..19548 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| DXE49_RS00090 () | 20092..20220 | + | 129 | Protein_17 | IS3 family transposase ISSfl10 | Transposase |
| DXE49_RS00095 () | 20267..21480 | + | 1214 | WP_136952279.1 | IS3 family transposase IS629 | Transposase |
| DXE49_RS00100 () | 21665..22078 | - | 414 | WP_136138333.1 | DUF1449 family protein | - |
| DXE49_RS00105 () | 22077..23290 | + | 1214 | WP_162908515.1 | IS3 family transposase IS629 | Transposase |
| DXE49_RS00110 () | 23331..24019 | - | 689 | Protein_21 | IS3 family transposase IS600 | Transposase |
| DXE49_RS00115 () | 24058..24378 | + | 321 | WP_001341409.1 | hypothetical protein | - |
| DXE49_RS00120 () | 24599..27319 | - | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| DXE49_RS00125 () | 27331..27663 | - | 333 | WP_001291056.1 | hypothetical protein | - |
| DXE49_RS00130 () | 27895..28230 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DXE49_RS00135 () | 28316..29164 | - | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| DXE49_RS00140 () | 29514..29709 | + | 196 | Protein_27 | hypothetical protein | - |
| DXE49_RS00145 () | 29743..29994 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| DXE49_RS00150 () | 30025..30270 | - | 246 | WP_012605149.1 | hypothetical protein | - |
| DXE49_RS00155 () | 30270..31160 | - | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| DXE49_RS00160 () | 31225..31491 | - | 267 | WP_001247865.1 | hypothetical protein | - |
| DXE49_RS00165 () | 31584..32018 | - | 435 | WP_000218854.1 | hypothetical protein | - |
| DXE49_RS00170 () | 32124..32744 | + | 621 | WP_162137195.1 | hypothetical protein | - |
| DXE49_RS00175 () | 32746..33246 | - | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| DXE49_RS00180 () | 33708..34305 | - | 598 | Protein_35 | hypothetical protein | - |
| DXE49_RS00185 () | 34302..35021 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| DXE49_RS00190 () | 35018..35266 | - | 249 | Protein_37 | conjugation system SOS inhibitor PsiB | - |
| DXE49_RS00195 () | 35261..35500 | - | 240 | Protein_38 | hypothetical protein | - |
| DXE49_RS00200 () | 35545..35979 | - | 435 | WP_000274418.1 | DUF1380 family protein | - |
| DXE49_RS00205 () | 35991..36209 | - | 219 | WP_001443814.1 | hypothetical protein | - |
| DXE49_RS00210 () | 36209..36892 | - | 684 | WP_000086167.1 | DNA methylase | - |
| DXE49_RS00215 () | 36968..37279 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| DXE49_RS00220 () | 37305..37712 | - | 408 | Protein_43 | DUF1281 domain-containing protein | - |
| DXE49_RS00225 () | 37686..38201 | - | 516 | Protein_44 | DUF1281 domain-containing protein | - |
| DXE49_RS00230 () | 38450..39409 | + | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| DXE49_RS00235 () | 39409..39804 | + | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| DXE49_RS00240 () | 39884..40651 | - | 768 | Protein_47 | IS3 family transposase | - |
| DXE49_RS00245 () | 40765..41154 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| DXE49_RS00250 () | 41198..42571 | - | 1374 | Protein_49 | Catalase-peroxidase | VF |
| DXE49_RS00260 () | 44627..45604 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| DXE49_RS00265 () | 45767..45994 | + | 228 | WP_001341442.1 | transposase | - |
| DXE49_RS00270 () | 46048..46722 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00275 () | 46719..47066 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00280 () | 47086..48638 | + | 1553 | Protein_55 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00285 () | 48672..49061 | + | 390 | Protein_56 | IS91 family transposase ISMno23 | Transposase |
| DXE49_RS00290 () | 49462..49827 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| DXE49_RS00295 () | 49827..51014 | + | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| DXE49_RS00300 () | 51605..52620 | + | 1016 | Protein_59 | IS91 family transposase ISEc37 | Transposase |
| DXE49_RS00305 () | 53240..54749 | + | 1510 | Protein_60 | ISL3 family transposase | - |
| DXE49_RS00310 () | 54800..54914 | - | 115 | Protein_61 | IS3 family transposase | - |
| DXE49_RS00315 () | 55001..55387 | + | 387 | Protein_62 | IS66 family transposase ISEc23 | Transposase |
| DXE49_RS00320 () | 55458..56610 | + | 1153 | Protein_63 | IS3 family transposase | - |
| DXE49_RS00325 () | 56622..58122 | + | 1501 | Protein_64 | IS66 family transposase | - |
| DXE49_RS00330 () | 58189..58597 | - | 409 | Protein_65 | IS3 family transposase | - |
| DXE49_RS00335 () | 58604..58834 | + | 231 | WP_001443774.1 | transposase | - |
| DXE49_RS00340 () | 58949..68447 | + | 9499 | Protein_67 | Toxin B | VF |
| DXE49_RS00345 () | 69406..70437 | - | 1032 | WP_000907857.1 | replication initiation protein | - |
| DXE49_RS00350 () | 71146..71787 | + | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| DXE49_RS00355 () | 71928..72593 | + | 666 | WP_000154135.1 | hypothetical protein | - |
| DXE49_RS00360 () | 72860..73219 | + | 360 | Protein_71 | DUF1449 family protein | - |
| DXE49_RS00365 () | 73253..74805 | - | 1553 | Protein_72 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00370 () | 74825..75172 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00375 () | 75169..75843 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| DXE49_RS00380 () | 75897..76151 | - | 255 | WP_097455692.1 | tyrosine-type recombinase/integrase | - |
| DXE49_RS00390 () | 77573..78118 | + | 546 | WP_001165114.1 | hypothetical protein | - |
| DXE49_RS00395 () | 78280..78696 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DXE49_RS00400 () | 78693..78923 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DXE49_RS00405 () | 79483..79896 | + | 414 | WP_000465041.1 | hypothetical protein | - |
| DXE49_RS00410 () | 79898..80680 | + | 783 | WP_001164205.1 | site-specific integrase | - |
| DXE49_RS00415 () | 80853..81206 | + | 354 | WP_000864810.1 | colicin M immunity protein | - |
| DXE49_RS00420 () | 81214..81405 | - | 192 | Protein_83 | lipid II-degrading bacteriocin | - |
| DXE49_RS00425 () | 81409..81552 | - | 144 | Protein_84 | transcriptional regulator | - |
| DXE49_RS00430 () | 81619..83058 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| DXE49_RS00435 () | 83062..85182 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| DXE49_RS00440 () | 85232..88228 | - | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| DXE49_RS00445 () | 88230..88745 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|