MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP031349 Location: 5019432..5028783 Organism: Escherichia coli O145 strain RM9467-C1 Replicon: chromosome
Accession: NZ_CP031349 Location: 5019432..5028783 Organism: Escherichia coli O145 strain RM9467-C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE51_RS25040 () | 5016163..5016882 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| DXE51_RS25045 () | 5016879..5018510 | - | 1632 | WP_022581427.1 | sensor histidine kinase | - |
| DXE51_RS25050 () | 5018691..5018921 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| DXE51_RS25055 () | 5018933..5019205 | + | 273 | WP_000405653.1 | N-acetyltransferase | - |
| DXE51_RS25060 () | 5019432..5019728 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DXE51_RS25065 () | 5019756..5019929 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DXE51_RS25070 () | 5020048..5021565 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| DXE51_RS25075 () | 5021802..5023259 | - | 1458 | WP_000856822.1 | dipeptide/tripeptide permease DtpC | - |
| DXE51_RS25080 () | 5023318..5025465 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| DXE51_RS25085 () | 5025545..5026879 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DXE51_RS25090 () | 5027245..5028783 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DXE51_RS25100 () | 5031053..5033569 | - | 2517 | WP_001378240.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |