MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP031345 Location: 5105938..5115289 Organism: Escherichia coli O145 strain RM12367-C1 Replicon: chromosome
Accession: NZ_CP031345 Location: 5105938..5115289 Organism: Escherichia coli O145 strain RM12367-C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXE53_RS25675 () | 5102669..5103388 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| DXE53_RS25680 () | 5103385..5105016 | - | 1632 | WP_022581427.1 | sensor histidine kinase | - |
| DXE53_RS25685 () | 5105197..5105427 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| DXE53_RS25690 () | 5105439..5105711 | + | 273 | WP_000405653.1 | N-acetyltransferase | - |
| DXE53_RS25695 () | 5105938..5106234 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DXE53_RS25700 () | 5106262..5106435 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DXE53_RS25705 () | 5106554..5108071 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| DXE53_RS25710 () | 5108308..5109765 | - | 1458 | WP_000856822.1 | dipeptide/tripeptide permease DtpC | - |
| DXE53_RS25715 () | 5109824..5111971 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| DXE53_RS25720 () | 5112051..5113385 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DXE53_RS25725 () | 5113751..5115289 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DXE53_RS25735 () | 5117559..5120075 | - | 2517 | WP_001378240.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |