MGE detailed information
MGE type: Prophage MGE length: 116126 bp
Accession: NZ_CP031256 Location: 3371172..3487297 Organism: Escherichia coli strain M16807 Replicon: chromosome
Accession: NZ_CP031256 Location: 3371172..3487297 Organism: Escherichia coli strain M16807 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV447_RS17005 () | 3366174..3366932 | - | 759 | WP_001304451.1 | hypothetical protein | - |
| DV447_RS17015 () | 3367631..3368545 | + | 915 | WP_000555630.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| DV447_RS17020 () | 3368545..3369372 | + | 828 | WP_000983716.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| DV447_RS17025 () | 3369369..3370226 | + | 858 | WP_001101730.1 | iron/manganese ABC transporter permease subunit SitC | - |
| DV447_RS17030 () | 3370223..3371080 | + | 858 | WP_000968127.1 | iron/manganese ABC transporter permease subunit SitD | - |
| DV447_RS17035 () | 3371172..3371465 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| DV447_RS17040 () | 3371478..3371756 | - | 279 | WP_000654167.1 | hypothetical protein | - |
| DV447_RS17045 () | 3371753..3373813 | - | 2061 | WP_000290543.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DV447_RS17050 () | 3373872..3377348 | - | 3477 | WP_001546181.1 | host specificity protein J | - |
| DV447_RS17055 () | 3377409..3378041 | - | 633 | WP_000090917.1 | tail assembly protein | - |
| DV447_RS17060 () | 3377978..3378721 | - | 744 | WP_000140699.1 | C40 family peptidase | - |
| DV447_RS17065 () | 3378727..3379425 | - | 699 | WP_001152660.1 | phage minor tail protein L | - |
| DV447_RS17070 () | 3379425..3379754 | - | 330 | WP_000847405.1 | phage tail protein | - |
| DV447_RS17075 () | 3379751..3382312 | - | 2562 | WP_000840269.1 | phage tail tape measure protein | - |
| DV447_RS17080 () | 3382305..3382739 | - | 435 | WP_000459474.1 | phage tail assembly protein T | - |
| DV447_RS17085 () | 3382721..3383143 | - | 423 | WP_000479129.1 | phage minor tail protein G | - |
| DV447_RS17090 () | 3383159..3383899 | - | 741 | WP_001351266.1 | phage tail protein | - |
| DV447_RS17095 () | 3383907..3384302 | - | 396 | WP_000683101.1 | phage minor tail U family protein | - |
| DV447_RS17100 () | 3384299..3384877 | - | 579 | WP_000975062.1 | phage tail protein | - |
| DV447_RS17105 () | 3384889..3385242 | - | 354 | WP_001204540.1 | tail attachment protein | - |
| DV447_RS17110 () | 3385235..3385609 | - | 375 | WP_000201530.1 | hypothetical protein | - |
| DV447_RS17115 () | 3385661..3386689 | - | 1029 | WP_000522648.1 | minor capsid protein E | - |
| DV447_RS17120 () | 3386747..3387094 | - | 348 | WP_000256840.1 | head decoration protein | - |
| DV447_RS17125 () | 3387131..3388636 | - | 1506 | WP_001546180.1 | S49 family peptidase | - |
| DV447_RS17130 () | 3388626..3390218 | - | 1593 | WP_001537684.1 | phage portal protein | - |
| DV447_RS17135 () | 3390215..3390421 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| DV447_RS17140 () | 3390405..3392333 | - | 1929 | WP_001335577.1 | phage terminase large subunit family protein | - |
| DV447_RS17145 () | 3392305..3392853 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| DV447_RS26595 () | 3393416..3393598 | - | 183 | WP_000881610.1 | hypothetical protein | - |
| DV447_RS17165 () | 3393805..3394131 | - | 327 | WP_000830178.1 | TonB family protein | - |
| DV447_RS17170 () | 3394612..3394905 | + | 294 | WP_001298464.1 | increased serum survival lipoprotein Iss | - |
| DV447_RS26600 () | 3394996..3395178 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| DV447_RS17180 () | 3395395..3395892 | - | 498 | WP_001135277.1 | lysozyme RrrD | - |
| DV447_RS17185 () | 3395892..3396107 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| DV447_RS17190 () | 3396696..3397778 | + | 1083 | WP_000737271.1 | porin OmpC | - |
| DV447_RS17195 () | 3397967..3398350 | - | 384 | WP_001204776.1 | antitermination protein QuuD | - |
| DV447_RS17200 () | 3398436..3398576 | - | 141 | WP_000971053.1 | YlcG family protein | - |
| DV447_RS17205 () | 3398573..3398935 | - | 363 | WP_001099712.1 | crossover junction endodeoxyribonuclease RusA | - |
| DV447_RS17210 () | 3398932..3399021 | - | 90 | Protein_3143 | DUF1364 domain-containing protein | - |
| DV447_RS17220 () | 3399142..3399483 | - | 342 | WP_000386643.1 | DUF2591 family protein | - |
| DV447_RS17225 () | 3399486..3399662 | - | 177 | WP_001254243.1 | NinE family protein | - |
| DV447_RS17230 () | 3399659..3400186 | - | 528 | WP_000153286.1 | phage N-6-adenine-methyltransferase | - |
| DV447_RS17235 () | 3400183..3400623 | - | 441 | WP_000736913.1 | recombination protein NinB | - |
| DV447_RS17240 () | 3400697..3400987 | - | 291 | WP_000145927.1 | protein ren | - |
| DV447_RS17245 () | 3400984..3401685 | - | 702 | WP_000788872.1 | Replication protein 14 | - |
| DV447_RS17250 () | 3401682..3402581 | - | 900 | WP_000185431.1 | replication protein | - |
| DV447_RS17255 () | 3402614..3402910 | - | 297 | WP_000442609.1 | hypothetical protein | - |
| DV447_RS17260 () | 3403052..3403267 | - | 216 | WP_000067727.1 | helix-turn-helix transcriptional regulator | - |
| DV447_RS17265 () | 3403343..3404038 | + | 696 | WP_001302016.1 | LexA family transcriptional regulator | - |
| DV447_RS17270 () | 3404078..3404635 | + | 558 | WP_001062368.1 | hypothetical protein | - |
| DV447_RS17275 () | 3404632..3405384 | + | 753 | WP_000968518.1 | DUF1828 domain-containing protein | - |
| DV447_RS17280 () | 3405661..3405843 | + | 183 | WP_000438342.1 | hypothetical protein | - |
| DV447_RS17285 () | 3405821..3406093 | + | 273 | WP_000088199.1 | hypothetical protein | - |
| DV447_RS17290 () | 3406110..3406691 | - | 582 | WP_001066176.1 | superinfection exclusion B family protein | - |
| DV447_RS17295 () | 3406798..3407945 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| DV447_RS17300 () | 3408158..3408358 | + | 201 | WP_000213979.1 | antirestriction Ral family protein | - |
| DV447_RS17305 () | 3408541..3408909 | + | 369 | WP_000065374.1 | DUF2528 family protein | - |
| DV447_RS26605 () | 3408982..3409146 | + | 165 | WP_001198860.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| DV447_RS26610 () | 3409115..3409258 | + | 144 | WP_000372923.1 | host cell division inhibitory peptide Kil | - |
| DV447_RS17325 () | 3409334..3409630 | + | 297 | WP_000995434.1 | host-nuclease inhibitor protein Gam | - |
| DV447_RS17330 () | 3409636..3410421 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| DV447_RS17335 () | 3410418..3411098 | + | 681 | WP_000186790.1 | YqaJ viral recombinase family protein | - |
| DV447_RS17340 () | 3411095..3411277 | + | 183 | WP_000149544.1 | DUF1317 domain-containing protein | - |
| DV447_RS17345 () | 3411250..3411423 | + | 174 | Protein_3168 | DUF1382 family protein | - |
| DV447_RS17355 () | 3412771..3412986 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| DV447_RS17360 () | 3413085..3413306 | + | 222 | WP_000763378.1 | TraR/DksA family transcriptional regulator | - |
| DV447_RS17365 () | 3413303..3414067 | + | 765 | WP_001289890.1 | ead/Ea22-like family protein | - |
| DV447_RS17370 () | 3414069..3414323 | + | 255 | WP_001518554.1 | hypothetical protein | - |
| DV447_RS17375 () | 3414341..3414874 | + | 534 | WP_001327280.1 | hypothetical protein | - |
| DV447_RS17380 () | 3414876..3415085 | + | 210 | WP_000951713.1 | hypothetical protein | - |
| DV447_RS17385 () | 3415082..3415822 | + | 741 | WP_000208010.1 | DUF550 domain-containing protein | - |
| DV447_RS17390 () | 3415815..3416099 | + | 285 | WP_001304460.1 | ASCH domain-containing protein | - |
| DV447_RS17395 () | 3416125..3416364 | + | 240 | WP_000490215.1 | DUF4222 domain-containing protein | - |
| DV447_RS17400 () | 3416504..3416740 | + | 237 | WP_000088653.1 | excisionase | - |
| DV447_RS17405 () | 3416730..3417872 | + | 1143 | WP_000741334.1 | hypothetical protein ; Integrase | Integrase |
| DV447_RS17410 () | 3417986..3419236 | - | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| DV447_RS17415 () | 3419408..3420061 | + | 654 | WP_001248695.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| DV447_RS17420 () | 3420071..3420532 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| DV447_RS17425 () | 3420586..3421692 | + | 1107 | WP_001443105.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| DV447_RS17430 () | 3421728..3422369 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| DV447_RS17435 () | 3422373..3423743 | + | 1371 | WP_000423742.1 | adenylosuccinate lyase | - |
| DV447_RS17440 () | 3423913..3424584 | + | 672 | WP_001265481.1 | Transcriptional regulatory protein PhoP | VF |
| DV447_RS17445 () | 3424584..3426044 | + | 1461 | WP_000734671.1 | two-component system sensor histidine kinase PhoQ | - |
| DV447_RS17450 () | 3426120..3427241 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| DV447_RS17455 () | 3427290..3428516 | - | 1227 | WP_000359446.1 | peptidase T | - |
| DV447_RS17465 () | 3428766..3429902 | + | 1137 | WP_000531594.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| DV447_RS17470 () | 3429886..3430749 | + | 864 | WP_000799413.1 | spermidine/putrescine ABC transporter permease PotB | - |
| DV447_RS17475 () | 3430981..3431247 | - | 267 | WP_000937481.1 | tail fiber assembly protein | - |
| DV447_RS17480 () | 3431304..3431972 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| DV447_RS17490 () | 3432027..3432611 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| DV447_RS17495 () | 3432611..3435637 | - | 3027 | WP_000216487.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DV447_RS17500 () | 3435789..3436388 | - | 600 | WP_001233154.1 | Outer membrane protein X | VF |
| DV447_RS17505 () | 3436456..3440148 | - | 3693 | WP_016265923.1 | DUF1983 domain-containing protein | - |
| DV447_RS17515 () | 3440492..3441124 | - | 633 | WP_072037205.1 | tail assembly protein | - |
| DV447_RS17520 () | 3441070..3441813 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| DV447_RS17525 () | 3441824..3442522 | - | 699 | WP_001348269.1 | phage minor tail protein L | - |
| DV447_RS17530 () | 3442522..3442851 | - | 330 | WP_000847298.1 | phage tail protein | - |
| DV447_RS17535 () | 3442848..3445409 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| DV447_RS17540 () | 3445390..3445803 | - | 414 | WP_000533453.1 | phage tail assembly protein T | - |
| DV447_RS17545 () | 3445830..3446261 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| DV447_RS17550 () | 3446280..3447029 | - | 750 | WP_000235047.1 | phage tail protein | - |
| DV447_RS17555 () | 3447037..3447432 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| DV447_RS17560 () | 3447429..3447962 | - | 534 | WP_000974996.1 | phage tail protein | - |
| DV447_RS17565 () | 3447978..3448331 | - | 354 | WP_001204533.1 | tail attachment protein | - |
| DV447_RS17570 () | 3448324..3448698 | - | 375 | WP_000201530.1 | hypothetical protein | - |
| DV447_RS17575 () | 3448750..3449778 | - | 1029 | WP_000522603.1 | major capsid protein | - |
| DV447_RS17580 () | 3449836..3450183 | - | 348 | WP_000256814.1 | head decoration protein | - |
| DV447_RS17585 () | 3450220..3451725 | - | 1506 | WP_001556921.1 | S49 family peptidase | - |
| DV447_RS17590 () | 3451715..3453307 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| DV447_RS17595 () | 3453304..3453510 | - | 207 | WP_000258993.1 | head-tail joining protein | - |
| DV447_RS17600 () | 3453494..3455422 | - | 1929 | WP_001309424.1 | phage terminase large subunit family protein | - |
| DV447_RS17605 () | 3455394..3455903 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| DV447_RS26615 () | 3456518..3456655 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| DV447_RS17625 () | 3456862..3457188 | - | 327 | WP_000830178.1 | TonB family protein | - |
| DV447_RS17630 () | 3457499..3457966 | - | 468 | WP_032142285.1 | lysis protein | - |
| DV447_RS26620 () | 3457969..3458100 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| DV447_RS17635 () | 3458115..3458297 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| DV447_RS17640 () | 3458454..3458987 | - | 534 | WP_001092866.1 | lysozyme | - |
| DV447_RS17645 () | 3459024..3459914 | - | 891 | WP_001037012.1 | YdfR family protein | - |
| DV447_RS17650 () | 3459919..3460134 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| DV447_RS17655 () | 3460211..3460456 | - | 246 | WP_001556910.1 | DUF826 domain-containing protein | - |
| DV447_RS17660 () | 3460494..3460676 | - | 183 | WP_001304601.1 | DUF1378 family protein | - |
| DV447_RS17665 () | 3460813..3462775 | - | 1963 | Protein_3228 | DUF1737 domain-containing protein | - |
| DV447_RS17670 () | 3463036..3463371 | + | 336 | WP_001443236.1 | anti-adapter protein IraM | - |
| DV447_RS26625 () | 3463667..3463780 | - | 114 | WP_157835956.1 | DUF3927 family protein | - |
| DV447_RS17680 () | 3463756..3463953 | - | 198 | WP_000917765.1 | hypothetical protein | - |
| DV447_RS17685 () | 3464178..3464732 | - | 555 | WP_000640021.1 | DUF1133 family protein | - |
| DV447_RS17690 () | 3464741..3465100 | - | 360 | WP_000904110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| DV447_RS17695 () | 3465113..3466162 | - | 1050 | WP_001265310.1 | DUF968 domain-containing protein | - |
| DV447_RS17700 () | 3466164..3466442 | - | 279 | WP_032141837.1 | hypothetical protein | - |
| DV447_RS17705 () | 3466609..3466764 | - | 156 | WP_001443235.1 | type I toxin-antitoxin system toxin HokD | - |
| DV447_RS17720 () | 3467323..3467837 | - | 515 | Protein_3237 | hypothetical protein | - |
| DV447_RS26780 () | 3467834..3468010 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| DV447_RS17725 () | 3468003..3468185 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| DV447_RS17730 () | 3468279..3468635 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| DV447_RS26785 () | 3468613..3468756 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| DV447_RS17735 () | 3468767..3469030 | - | 264 | WP_000224233.1 | hypothetical protein | - |
| DV447_RS17740 () | 3469032..3469250 | - | 219 | WP_000209148.1 | DUF4014 family protein | - |
| DV447_RS17745 () | 3469283..3469495 | - | 213 | WP_000072553.1 | hypothetical protein | - |
| DV447_RS17750 () | 3469601..3470023 | - | 423 | Protein_3245 | DUF977 family protein | - |
| DV447_RS17755 () | 3470039..3470809 | - | 771 | WP_000450998.1 | DUF1627 domain-containing protein | - |
| DV447_RS17760 () | 3470831..3471577 | - | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| DV447_RS17765 () | 3471584..3472546 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| DV447_RS17770 () | 3472569..3472994 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| DV447_RS17775 () | 3472991..3473293 | - | 303 | WP_001556930.1 | transcriptional regulator | - |
| DV447_RS17780 () | 3473391..3473762 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| DV447_RS17785 () | 3473783..3473974 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| DV447_RS17790 () | 3473976..3474254 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DV447_RS17800 () | 3474546..3474698 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| DV447_RS17805 () | 3474710..3475048 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| DV447_RS17810 () | 3475037..3475303 | - | 267 | WP_012601410.1 | hypothetical protein | - |
| DV447_RS17825 () | 3475807..3475995 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| DV447_RS17830 () | 3475992..3476180 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| DV447_RS17835 () | 3476273..3478711 | + | 2439 | WP_000102132.1 | exonuclease | - |
| DV447_RS17840 () | 3478773..3479042 | + | 270 | WP_000003742.1 | excisionase | - |
| DV447_RS17845 () | 3479011..3480129 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| DV447_RS17850 () | 3480296..3481090 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| DV447_RS17855 () | 3481087..3482133 | + | 1047 | WP_000759310.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| DV447_RS17860 () | 3482191..3482652 | + | 462 | WP_001443234.1 | DUF3592 domain-containing protein | - |
| DV447_RS17865 () | 3482649..3483437 | + | 789 | WP_000723290.1 | TPM domain-containing protein | - |
| DV447_RS17870 () | 3483575..3484396 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| DV447_RS17875 () | 3484412..3485323 | - | 912 | WP_000291305.1 | N-acetylglucosamine kinase | - |
| DV447_RS17880 () | 3485352..3486596 | - | 1245 | WP_001251365.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| DV447_RS17885 () | 3486596..3487297 | - | 702 | WP_001033695.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DV447_RS17890 () | 3487290..3488489 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| DV447_RS17895 () | 3488750..3489823 | + | 1074 | WP_000810242.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|