MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 98524 bp
Accession: NZ_CP031247 Location: 337246..435769 Organism: Streptococcus pneumoniae strain M23734 Replicon: chromosome
Accession: NZ_CP031247 Location: 337246..435769 Organism: Streptococcus pneumoniae strain M23734 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV129_RS01850 () | 332364..333200 | + | 837 | WP_000285727.1 | transcription antiterminator | - |
| DV129_RS01855 () | 333236..333553 | + | 318 | WP_001078331.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| DV129_RS01860 () | 333553..335244 | + | 1692 | WP_001037347.1 | lactose-specific PTS transporter subunit EIIC | - |
| DV129_RS01865 () | 335459..336865 | + | 1407 | WP_000169287.1 | 6-phospho-beta-galactosidase | - |
| DV129_RS01870 () | 336955..337167 | + | 213 | WP_075270861.1 | DUF3884 family protein | - |
| DV129_RS01875 () | 337446..338207 | - | 762 | WP_000917601.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DV129_RS01880 () | 338389..339351 | - | 963 | WP_000451369.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| DV129_RS01885 () | 339539..341698 | - | 2160 | WP_000523249.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| DV129_RS01890 () | 341779..341997 | - | 219 | WP_000259249.1 | glutaredoxin-like protein NrdH | - |
| DV129_RS01895 () | 342348..342611 | + | 264 | WP_000146947.1 | phosphocarrier protein HPr | - |
| DV129_RS01900 () | 342617..344350 | + | 1734 | WP_000138135.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| DV129_RS01905 () | 344605..347055 | + | 2451 | WP_114865961.1 | pneumococcal histidine triad protein PhtA | - |
| DV129_RS01910 () | 347213..349747 | + | 2535 | WP_000700264.1 | pneumococcal-type histidine triad protein | - |
| DV129_RS01915 () | 350169..350549 | + | 381 | Protein_367 | PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM | - |
| DV129_RS01920 () | 351116..352462 | + | 1347 | WP_012677075.1 | IS1380 family transposase ISSpn5 | Transposase |
| DV129_RS01925 () | 352715..353428 | + | 714 | WP_000499437.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| DV129_RS01930 () | 353442..354089 | + | 648 | WP_001809355.1 | hypothetical protein | - |
| DV129_RS01935 () | 354227..354880 | + | 654 | WP_000401329.1 | uracil-DNA glycosylase | - |
| DV129_RS01940 () | 354890..355354 | + | 465 | WP_001135768.1 | 8-oxo-dGTP diphosphatase | - |
| DV129_RS01945 () | 355367..356635 | + | 1269 | WP_000924489.1 | dihydroorotase | - |
| DV129_RS01950 () | 356649..356909 | + | 261 | WP_001105925.1 | hypothetical protein | - |
| DV129_RS01955 () | 356920..358281 | + | 1362 | WP_000278534.1 | sodium-coupled multidrug efflux MATE transporter PdrM | - |
| DV129_RS01960 () | 358435..359403 | + | 969 | WP_000105360.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| DV129_RS01965 () | 359419..360411 | + | 993 | WP_000448709.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| DV129_RS01970 () | 360629..361672 | + | 1044 | WP_000752697.1 | dihydrolipoamide acetyltransferase | - |
| DV129_RS01975 () | 361736..363421 | + | 1686 | WP_162489867.1 | dihydrolipoyl dehydrogenase | - |
| DV129_RS01980 () | 363485..364474 | + | 990 | WP_000873993.1 | Lipoate-protein ligase LplJ | VF |
| DV129_RS01985 () | 364547..365617 | - | 1071 | WP_000817878.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| DV129_RS01990 () | 366111..367661 | - | 1551 | WP_000392544.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| DV129_RS01995 () | 367677..368456 | - | 780 | WP_000201135.1 | ribonuclease HII | - |
| DV129_RS02000 () | 368443..369294 | - | 852 | WP_000201315.1 | Ribosome biogenesis GTPase A | VF |
| DV129_RS02005 () | 369376..370884 | - | 1509 | WP_000291919.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| DV129_RS02010 () | 370969..371202 | - | 234 | WP_001022845.1 | hypothetical protein | - |
| DV129_RS02015 () | 371472..371696 | - | 225 | WP_000919629.1 | helix-turn-helix domain-containing protein | - |
| DV129_RS02020 () | 371800..373629 | - | 1830 | WP_000237133.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DV129_RS02025 () | 373616..373981 | - | 366 | WP_000401235.1 | plasmid mobilization relaxosome protein MobC | - |
| DV129_RS02030 () | 373986..374342 | - | 357 | WP_000817506.1 | hypothetical protein | - |
| DV129_RS02035 () | 374638..374928 | - | 291 | WP_001080184.1 | hypothetical protein | - |
| DV129_RS02040 () | 374918..375283 | - | 366 | WP_000981955.1 | hypothetical protein | - |
| DV129_RS02045 () | 375280..376695 | - | 1416 | WP_000118334.1 | Y-family DNA polymerase | - |
| DV129_RS02050 () | 376698..377381 | - | 684 | WP_000492697.1 | LexA family transcriptional regulator | - |
| DV129_RS02055 () | 377609..378379 | - | 771 | WP_000405380.1 | zeta toxin family protein | Toxin Detail |
| DV129_RS02060 () | 378379..378855 | - | 477 | WP_000579600.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DV129_RS02065 () | 378925..379197 | - | 273 | WP_000494368.1 | hypothetical protein | - |
| DV129_RS02070 () | 379235..379618 | - | 384 | WP_000159221.1 | hypothetical protein | - |
| DV129_RS02075 () | 379615..379848 | - | 234 | WP_000152419.1 | hypothetical protein | - |
| DV129_RS02080 () | 379899..380984 | - | 1086 | WP_000401896.1 | toprim domain-containing protein | - |
| DV129_RS02085 () | 380994..381635 | - | 642 | WP_000933085.1 | hypothetical protein | - |
| DV129_RS02090 () | 381795..381992 | + | 198 | WP_001847545.1 | hypothetical protein | - |
| DV129_RS02095 () | 382006..382302 | - | 297 | WP_000998899.1 | hypothetical protein | - |
| DV129_RS02100 () | 382316..382600 | - | 285 | WP_000969643.1 | hypothetical protein | - |
| DV129_RS02105 () | 382675..388905 | - | 6231 | WP_205407062.1 | DEAD/DEAH box helicase family protein | - |
| DV129_RS02110 () | 388953..389363 | - | 411 | WP_000398567.1 | thrombospondin type 3 repeat-containing protein | - |
| DV129_RS02115 () | 389515..390081 | - | 567 | WP_000013899.1 | hypothetical protein | - |
| DV129_RS11855 () | 390100..390288 | + | 189 | WP_001860875.1 | hypothetical protein | - |
| DV129_RS02125 () | 390319..393132 | - | 2814 | WP_000653476.1 | CHAP domain-containing protein | - |
| DV129_RS02130 () | 393144..395501 | - | 2358 | WP_000824169.1 | hypothetical protein | - |
| DV129_RS02135 () | 395452..395811 | - | 360 | WP_001097589.1 | PrgI family protein | - |
| DV129_RS02140 () | 395865..396719 | - | 855 | WP_001054259.1 | conjugal transfer protein TrbL | - |
| DV129_RS02145 () | 396736..396978 | - | 243 | WP_000627865.1 | hypothetical protein | - |
| DV129_RS02150 () | 396999..398876 | - | 1878 | WP_012677090.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DV129_RS02155 () | 398876..399364 | - | 489 | WP_000093672.1 | hypothetical protein | - |
| DV129_RS02160 () | 399354..399653 | - | 300 | WP_000869760.1 | hypothetical protein | - |
| DV129_RS02170 () | 400326..400640 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| DV129_RS02175 () | 400656..401042 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| DV129_RS02180 () | 401071..402456 | + | 1386 | WP_000813485.1 | DNA translocase FtsK | - |
| DV129_RS02185 () | 402459..402611 | + | 153 | WP_000879507.1 | hypothetical protein | - |
| DV129_RS02190 () | 402634..403839 | + | 1206 | WP_000398284.1 | replication initiation factor domain-containing protein | - |
| DV129_RS02195 () | 403882..404103 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| DV129_RS02200 () | 404220..404717 | + | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| DV129_RS02205 () | 404692..405198 | + | 507 | WP_000506269.1 | conjugal transfer protein | - |
| DV129_RS02210 () | 405182..407629 | + | 2448 | WP_000331160.1 | ATP-binding protein | - |
| DV129_RS02215 () | 407632..409809 | + | 2178 | WP_000804748.1 | membrane protein | - |
| DV129_RS02220 () | 409806..410807 | + | 1002 | WP_000769868.1 | putative endopeptidase p60 | VF |
| DV129_RS02225 () | 410804..411739 | + | 936 | WP_001224320.1 | conjugal transfer protein | - |
| DV129_RS02230 () | 411984..412100 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| DV129_RS02235 () | 412116..414035 | + | 1920 | WP_000691751.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| DV129_RS02240 () | 414154..414321 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| DV129_RS02245 () | 414381..414734 | - | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| DV129_RS02255 () | 415239..415661 | + | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| DV129_RS02260 () | 415658..415888 | + | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| DV129_RS02270 () | 416349..416552 | + | 204 | WP_000814511.1 | excisionase | - |
| DV129_RS02275 () | 416634..417851 | + | 1218 | WP_114865963.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| DV129_RS02280 () | 418013..418615 | - | 603 | WP_000821271.1 | CPBP family intramembrane metalloprotease | - |
| DV129_RS02285 () | 418618..418851 | - | 234 | WP_000840776.1 | hypothetical protein | - |
| DV129_RS02290 () | 418864..419244 | - | 381 | WP_000566528.1 | hypothetical protein | - |
| DV129_RS02295 () | 419237..419686 | - | 450 | WP_000645900.1 | hypothetical protein | - |
| DV129_RS02300 () | 419670..421028 | - | 1359 | WP_001210976.1 | DNA (cytosine-5-)-methyltransferase | - |
| DV129_RS02305 () | 421127..421906 | - | 780 | WP_000822768.1 | replication initiator protein A | - |
| DV129_RS11860 () | 421903..422076 | - | 174 | WP_000159602.1 | hypothetical protein | - |
| DV129_RS02320 () | 422606..427819 | - | 5214 | WP_000054793.1 | G5 domain-containing protein | - |
| DV129_RS02325 () | 427863..434342 | - | 6480 | WP_000417184.1 | Immunoglobulin A1 protease | VF |
| DV129_RS02330 () | 434551..435729 | - | 1179 | WP_000174775.1 | hypothetical protein | - |
| DV129_RS02340 () | 435944..439594 | - | 3651 | WP_000767228.1 | helicase-exonuclease AddAB subunit AddA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|