MGE detailed information
MGE type: Genomic_island MGE length: 20028 bp
Accession: NZ_CP031214 Location: 3980896..4000923 Organism: Escherichia coli strain C600 Replicon: chromosome
Accession: NZ_CP031214 Location: 3980896..4000923 Organism: Escherichia coli strain C600 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK885_RS20645 () | 3976375..3976878 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| DK885_RS20650 () | 3976891..3977421 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| DK885_RS20655 () | 3977431..3980067 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| DK885_RS20660 () | 3980134..3980859 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| DK885_RS20665 () | 3980896..3981435 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| DK885_RS20670 () | 3981500..3982048 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| DK885_RS20680 () | 3982529..3983143 | - | 615 | WP_038404959.1 | Tyrosine recombinase XerD | VF |
| DK885_RS20685 () | 3983136..3983833 | - | 698 | Protein_3784 | IS1 family transposase IS1A | Transposase |
| DK885_RS20695 () | 3984379..3984981 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| DK885_RS20710 () | 3986437..3987153 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DK885_RS20715 () | 3987173..3988279 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| DK885_RS20720 () | 3988344..3989324 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DK885_RS20725 () | 3989907..3991147 | - | 1241 | Protein_3789 | helicase YjhR | - |
| DK885_RS20735 () | 3991263..3991508 | + | 246 | Protein_3790 | GNAT family N-acetyltransferase | - |
| DK885_RS20745 () | 3991885..3992142 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| DK885_RS20750 () | 3992154..3992699 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| DK885_RS20755 () | 3992755..3993501 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| DK885_RS20760 () | 3993670..3993888 | + | 219 | Protein_3794 | hypothetical protein | - |
| DK885_RS24165 () | 3993926..3994042 | + | 117 | Protein_3795 | VOC family protein | - |
| DK885_RS20765 () | 3994287..3995408 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| DK885_RS20770 () | 3995405..3995683 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| DK885_RS20775 () | 3995695..3997008 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| DK885_RS20780 () | 3997021..3997827 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| DK885_RS20785 () | 3997958..3998389 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| DK885_RS20790 () | 3998401..3999033 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| DK885_RS20795 () | 3999050..3999832 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DK885_RS20800 () | 4000135..4000923 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| DK885_RS20805 () | 4000928..4001833 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| DK885_RS20810 () | 4001844..4003811 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| DK885_RS20815 () | 4003918..4005267 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|