MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 50124 bp
Accession: NZ_CP031110 Location: 1..50124 Organism: Escherichia coli strain AMSCJX02 Replicon: plasmid pAMSC5
Accession: NZ_CP031110 Location: 1..50124 Organism: Escherichia coli strain AMSCJX02 Replicon: plasmid pAMSC5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DUT84_RS28870 () | 368..779 | + | 412 | Protein_1 | pyridine nucleotide-disulfide oxidoreductase | - |
| DUT84_RS27330 () | 797..1159 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| DUT84_RS27335 () | 1156..1382 | + | 227 | Protein_3 | broad-spectrum mercury transporter MerE | - |
| DUT84_RS27340 () | 1407..1559 | - | 153 | Protein_4 | dihydropteroate synthase | - |
| DUT84_RS27345 () | 1553..1899 | - | 347 | Protein_5 | Multidrug resistance protein EbrA | ARG |
| DUT84_RS27350 () | 2053..2892 | - | 840 | Protein_6 | hypothetical protein | ARG |
| DUT84_RS27355 () | 3022..3552 | - | 531 | WP_114455244.1 | Dihydrofolate reductase type 1 | ARG |
| DUT84_RS27360 () | 3654..4667 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| DUT84_RS28645 () | 4870..5220 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| DUT84_RS27370 () | 5346..5906 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| DUT84_RS27375 () | 5909..8875 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| DUT84_RS27380 () | 9344..10204 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| DUT84_RS27385 () | 10387..10944 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DUT84_RS27390 () | 11108..14113 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DUT84_RS27395 () | 14536..14715 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| DUT84_RS27400 () | 14795..15616 | - | 822 | WP_001576903.1 | hypothetical protein | - |
| DUT84_RS27405 () | 15866..16390 | - | 525 | WP_001576904.1 | hypothetical protein | - |
| DUT84_RS27410 () | 16578..17216 | - | 639 | WP_001576905.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DUT84_RS27415 () | 17597..18259 | + | 663 | WP_000516402.1 | peptidyl-arginine deiminase | - |
| DUT84_RS27420 () | 18359..18640 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| DUT84_RS27425 () | 18665..19642 | + | 978 | WP_001579336.1 | hypothetical protein | - |
| DUT84_RS27430 () | 19639..20064 | - | 426 | WP_015058974.1 | TaxD | - |
| DUT84_RS27435 () | 20132..20578 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| DUT84_RS27440 () | 20603..21457 | - | 855 | WP_001239324.1 | replication initiation protein | - |
| DUT84_RS27450 () | 22519..22770 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| DUT84_RS27455 () | 22760..23041 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DUT84_RS27460 () | 23187..23510 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| DUT84_RS27465 () | 23555..23800 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| DUT84_RS27470 () | 23790..24005 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| DUT84_RS27475 () | 24098..24427 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| DUT84_RS27480 () | 24470..24649 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| DUT84_RS28875 () | 24719..24868 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| DUT84_RS27490 () | 24881..25153 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| DUT84_RS28880 () | 25410..25484 | + | 75 | Protein_34 | DNA distortion polypeptide 3 | - |
| DUT84_RS27500 () | 25479..26024 | + | 546 | WP_000757693.1 | hypothetical protein | - |
| DUT84_RS27505 () | 26027..27193 | + | 1167 | WP_001576909.1 | hypothetical protein | Relaxase |
| DUT84_RS27510 () | 27546..28064 | + | 519 | WP_001446885.1 | transcription termination factor NusG | - |
| DUT84_RS27515 () | 27994..28206 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| DUT84_RS27520 () | 28239..28886 | + | 648 | WP_001579339.1 | Type IV secretion system protein virB1 | VF |
| DUT84_RS27525 () | 28864..29160 | + | 297 | WP_000040716.1 | TrbC/VirB2 family protein | - |
| DUT84_RS27530 () | 29179..31932 | + | 2754 | WP_001363160.1 | Type IV secretion system protein virB4 | VF |
| DUT84_RS27535 () | 31943..32701 | + | 759 | WP_000744201.1 | pilus assembly protein | - |
| DUT84_RS27540 () | 32702..32929 | + | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| DUT84_RS27545 () | 32939..34072 | + | 1134 | WP_001576910.1 | type IV secretion system protein | - |
| DUT84_RS27550 () | 34317..35030 | + | 714 | WP_001579343.1 | type IV secretion system protein | - |
| DUT84_RS27555 () | 35035..35964 | + | 930 | WP_000783381.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| DUT84_RS27560 () | 35961..37166 | + | 1206 | WP_001579345.1 | Type IV secretion system protein virB10 | VF |
| DUT84_RS27565 () | 37168..38199 | + | 1032 | WP_001058476.1 | Type IV secretion system protein VirB11 | VF |
| DUT84_RS27570 () | 38202..40037 | + | 1836 | WP_001579346.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DUT84_RS27575 () | 40034..40447 | + | 414 | WP_001579347.1 | hypothetical protein | - |
| DUT84_RS27580 () | 40444..40746 | + | 303 | WP_001576896.1 | hypothetical protein | - |
| DUT84_RS27585 () | 40752..41009 | + | 258 | WP_001547185.1 | hypothetical protein | - |
| DUT84_RS28885 () | 41091..41525 | + | 435 | WP_001579348.1 | hypothetical protein | - |
| DUT84_RS27595 () | 41522..42058 | + | 537 | WP_001576898.1 | thermonuclease family protein | - |
| DUT84_RS27600 () | 42074..42478 | + | 405 | WP_001576899.1 | hypothetical protein | - |
| DUT84_RS27605 () | 42538..42858 | + | 321 | WP_001020837.1 | hypothetical protein | - |
| DUT84_RS27610 () | 42885..43472 | + | 588 | WP_001579352.1 | hypothetical protein | - |
| DUT84_RS27615 () | 43497..44072 | + | 576 | WP_001576901.1 | hypothetical protein | - |
| DUT84_RS27620 () | 44077..46230 | + | 2154 | WP_001576902.1 | type IA DNA topoisomerase | - |
| DUT84_RS27625 () | 46227..46433 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| DUT84_RS27630 () | 46449..46910 | + | 462 | WP_001293131.1 | H-NS histone family protein | - |
| DUT84_RS27635 () | 46961..47224 | + | 264 | WP_000072657.1 | hypothetical protein | - |
| DUT84_RS27640 () | 47557..47991 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| DUT84_RS27645 () | 48063..48413 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| DUT84_RS27650 () | 48427..48702 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| DUT84_RS27655 () | 48738..49160 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|