MGE detailed information
MGE type: Conjugative plasmid MGE length: 131411 bp
Accession: NZ_CP031106 Location: 1..131411 Organism: Escherichia coli strain AMSCJX02 Replicon: plasmid pAMSC1
Accession: NZ_CP031106 Location: 1..131411 Organism: Escherichia coli strain AMSCJX02 Replicon: plasmid pAMSC1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DUT84_RS24740 () | 4030..4756 | - | 727 | Protein_1 | hypothetical protein | - |
| DUT84_RS24745 () | 4870..5244 | - | 375 | WP_000868821.1 | hypothetical protein | - |
| DUT84_RS28540 () | 5365..5481 | - | 117 | WP_000338626.1 | hypothetical protein | - |
| DUT84_RS24750 () | 5491..5730 | - | 240 | WP_000714162.1 | permease | - |
| DUT84_RS24755 () | 5803..6081 | - | 279 | WP_000268337.1 | hypothetical protein | - |
| DUT84_RS24760 () | 6068..7795 | - | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| DUT84_RS24765 () | 7973..8359 | - | 387 | WP_001077335.1 | hypothetical protein | - |
| DUT84_RS24770 () | 8817..9668 | - | 852 | WP_000595210.1 | hypothetical protein | - |
| DUT84_RS24775 () | 9743..10300 | - | 558 | WP_000064431.1 | pyruvate dehydrogenase | - |
| DUT84_RS24780 () | 10374..10592 | - | 219 | WP_000260293.1 | hypothetical protein | - |
| DUT84_RS24785 () | 10606..10875 | - | 270 | WP_000184110.1 | hypothetical protein | - |
| DUT84_RS24790 () | 10868..11473 | - | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| DUT84_RS24795 () | 11545..11748 | - | 204 | WP_000050848.1 | hypothetical protein | - |
| DUT84_RS24800 () | 11950..14403 | - | 2454 | WP_001187970.1 | phosphoadenosine phosphosulfate reductase | - |
| DUT84_RS24805 () | 14491..14877 | - | 387 | WP_000042274.1 | hypothetical protein | - |
| DUT84_RS24810 () | 15110..15664 | - | 555 | WP_001093868.1 | hypothetical protein | - |
| DUT84_RS24815 () | 15738..16169 | - | 432 | WP_000687894.1 | hypothetical protein | - |
| DUT84_RS24820 () | 16230..17855 | - | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| DUT84_RS24825 () | 17933..18235 | - | 303 | WP_000410925.1 | hypothetical protein | - |
| DUT84_RS24830 () | 18313..18657 | - | 345 | WP_000209093.1 | hypothetical protein | - |
| DUT84_RS24835 () | 18849..19226 | - | 378 | WP_001337696.1 | hypothetical protein | - |
| DUT84_RS24840 () | 19271..19462 | - | 192 | WP_000651508.1 | hypothetical protein | - |
| DUT84_RS28550 () | 19480..19722 | + | 243 | WP_002210529.1 | hypothetical protein | - |
| DUT84_RS24850 () | 19800..20252 | - | 453 | WP_001176699.1 | hypothetical protein | - |
| DUT84_RS24855 () | 20242..20631 | - | 390 | WP_000026577.1 | hypothetical protein | - |
| DUT84_RS24860 () | 20693..20917 | - | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| DUT84_RS24865 () | 20983..21867 | - | 885 | WP_000477209.1 | hypothetical protein | - |
| DUT84_RS24870 () | 21941..22441 | - | 501 | WP_000793769.1 | hypothetical protein | - |
| DUT84_RS24875 () | 22532..23071 | - | 540 | WP_000018872.1 | hypothetical protein | - |
| DUT84_RS24880 () | 23336..23671 | - | 336 | WP_001071288.1 | hypothetical protein | - |
| DUT84_RS24885 () | 23733..25529 | - | 1797 | WP_000039318.1 | VWA domain-containing protein | - |
| DUT84_RS24890 () | 25614..26891 | - | 1278 | WP_000170086.1 | DUF3150 domain-containing protein | - |
| DUT84_RS24900 () | 27091..28101 | - | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| DUT84_RS24905 () | 28164..29153 | - | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| DUT84_RS24910 () | 29248..29778 | - | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| DUT84_RS24915 () | 29839..30747 | - | 909 | WP_000739139.1 | hypothetical protein | - |
| DUT84_RS24920 () | 30758..31726 | - | 969 | WP_000085162.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| DUT84_RS24925 () | 31946..32131 | - | 186 | WP_001186917.1 | hypothetical protein | - |
| DUT84_RS24930 () | 32435..32755 | - | 321 | WP_000547566.1 | hypothetical protein | - |
| DUT84_RS24935 () | 33049..33690 | + | 642 | WP_000796664.1 | hypothetical protein | - |
| DUT84_RS24940 () | 33813..34673 | + | 861 | WP_000709517.1 | hypothetical protein | - |
| DUT84_RS24945 () | 34712..37522 | - | 2811 | WP_001909286.1 | conjugal transfer mating pair stabilization protein TraN | - |
| DUT84_RS24950 () | 37626..38633 | - | 1008 | WP_000983283.1 | TraU family protein | - |
| DUT84_RS24955 () | 38630..39301 | - | 672 | WP_001337754.1 | EAL domain-containing protein | - |
| DUT84_RS24960 () | 39298..40563 | - | 1266 | WP_000621288.1 | conjugal transfer protein TraW | - |
| DUT84_RS24965 () | 40526..41056 | - | 531 | WP_001010738.1 | S26 family signal peptidase | - |
| DUT84_RS24970 () | 41053..41370 | - | 318 | WP_000351984.1 | hypothetical protein | - |
| DUT84_RS24975 () | 41385..43832 | - | 2448 | WP_000637386.1 | type IV secretion system protein TraC | - |
| DUT84_RS24980 () | 43829..44536 | - | 708 | WP_001259347.1 | DsbC family protein | - |
| DUT84_RS24985 () | 44685..50216 | - | 5532 | WP_000606833.1 | DUF4165 domain-containing protein | - |
| DUT84_RS24990 () | 50417..50809 | - | 393 | WP_000479535.1 | hypothetical protein | - |
| DUT84_RS24995 () | 50813..51391 | - | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DUT84_RS25000 () | 51388..52701 | - | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| DUT84_RS25005 () | 52701..53618 | - | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| DUT84_RS25010 () | 53602..54228 | - | 627 | WP_001049716.1 | hypothetical protein | - |
| DUT84_RS25015 () | 54225..54506 | - | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| DUT84_RS25020 () | 54651..55028 | - | 378 | WP_000509509.1 | hypothetical protein | - |
| DUT84_RS28785 () | 55028..55171 | - | 144 | WP_001275801.1 | hypothetical protein | - |
| DUT84_RS25025 () | 55352..56014 | - | 663 | WP_001231463.1 | hypothetical protein | - |
| DUT84_RS25030 () | 56014..56391 | - | 378 | WP_000869261.1 | hypothetical protein | - |
| DUT84_RS25035 () | 56401..56847 | - | 447 | WP_000122506.1 | hypothetical protein | - |
| DUT84_RS25040 () | 56857..57486 | - | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| DUT84_RS25045 () | 57443..58027 | - | 585 | WP_000332866.1 | hypothetical protein | - |
| DUT84_RS25050 () | 58038..59903 | - | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| DUT84_RS25055 () | 59900..62878 | - | 2979 | WP_001337757.1 | hypothetical protein | Relaxase |
| DUT84_RS25060 () | 63046..63663 | + | 618 | WP_001249396.1 | hypothetical protein | - |
| DUT84_RS25065 () | 63645..63878 | + | 234 | WP_001191892.1 | hypothetical protein | - |
| DUT84_RS25070 () | 63878..66070 | + | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| DUT84_RS25075 () | 66085..66573 | + | 489 | WP_000468105.1 | hypothetical protein | - |
| DUT84_RS25080 () | 66665..66964 | - | 300 | WP_000542259.1 | hypothetical protein | - |
| DUT84_RS25090 () | 67176..67793 | - | 618 | WP_000464631.1 | hypothetical protein | - |
| DUT84_RS25095 () | 67887..68105 | - | 219 | WP_000362482.1 | hypothetical protein | - |
| DUT84_RS25100 () | 68311..68967 | - | 657 | WP_000268551.1 | hypothetical protein | - |
| DUT84_RS25105 () | 68967..70394 | - | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| DUT84_RS25110 () | 70398..70898 | - | 501 | WP_000647189.1 | hypothetical protein | - |
| DUT84_RS25115 () | 70907..71218 | - | 312 | WP_002210541.1 | hypothetical protein | - |
| DUT84_RS25120 () | 71224..71655 | - | 432 | WP_005507681.1 | hypothetical protein | - |
| DUT84_RS25125 () | 71723..72397 | - | 675 | WP_000344151.1 | thymidylate kinase | - |
| DUT84_RS28790 () | 72372..72653 | - | 282 | WP_000044824.1 | hypothetical protein | - |
| DUT84_RS25135 () | 72646..73023 | - | 378 | WP_001125905.1 | hypothetical protein | - |
| DUT84_RS28565 () | 73342..73485 | + | 144 | WP_000939033.1 | hypothetical protein | - |
| DUT84_RS25140 () | 73577..74212 | + | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| DUT84_RS25145 () | 74265..74537 | - | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| DUT84_RS25150 () | 74586..75767 | - | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| DUT84_RS25155 () | 75771..76556 | - | 786 | WP_001151304.1 | Sporulation initiation inhibitor protein Soj | VF |
| DUT84_RS25160 () | 76730..77041 | - | 312 | WP_000338945.1 | hypothetical protein | - |
| DUT84_RS25170 () | 77348..78163 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| DUT84_RS25175 () | 78224..79027 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DUT84_RS25180 () | 79027..79863 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| DUT84_RS25190 () | 80169..80411 | + | 243 | WP_000844627.1 | transposase | - |
| DUT84_RS25195 () | 80443..81093 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DUT84_RS25200 () | 81199..82398 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| DUT84_RS25205 () | 82365..82553 | - | 189 | Protein_93 | IS91 family transposase | - |
| DUT84_RS25210 () | 82665..82970 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| DUT84_RS25215 () | 82998..84212 | - | 1215 | WP_000214122.1 | Bicyclomycin resistance protein | ARG |
| DUT84_RS28795 () | 84429..84875 | - | 447 | Protein_96 | DUF3363 domain-containing protein | - |
| DUT84_RS25225 () | 85344..86837 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| DUT84_RS25230 () | 87048..87272 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| DUT84_RS25235 () | 87269..88006 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DUT84_RS25240 () | 88113..88605 | + | 493 | Protein_100 | hypothetical protein | - |
| DUT84_RS25245 () | 88639..89343 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DUT84_RS25250 () | 89650..89829 | + | 180 | Protein_102 | winged helix-turn-helix domain-containing protein | - |
| DUT84_RS25255 () | 89894..90598 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DUT84_RS25260 () | 90813..91310 | - | 498 | WP_000062185.1 | hypothetical protein | - |
| DUT84_RS25265 () | 91313..91801 | - | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| DUT84_RS25270 () | 91898..92233 | + | 336 | WP_000683476.1 | hypothetical protein | - |
| DUT84_RS25275 () | 92248..92718 | - | 471 | WP_001281821.1 | hypothetical protein | - |
| DUT84_RS25280 () | 92711..93082 | - | 372 | WP_000516916.1 | hypothetical protein | - |
| DUT84_RS25285 () | 93093..93287 | - | 195 | WP_000343597.1 | hypothetical protein | - |
| DUT84_RS25295 () | 93628..94176 | - | 549 | WP_001061574.1 | transcriptional regulator | - |
| DUT84_RS25300 () | 94339..94689 | + | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DUT84_RS25305 () | 94694..94996 | + | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| DUT84_RS25310 () | 95023..95316 | - | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| DUT84_RS25315 () | 95404..95676 | - | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| DUT84_RS25320 () | 95734..96261 | - | 528 | WP_001236377.1 | thermonuclease family protein | - |
| DUT84_RS25325 () | 96278..96466 | - | 189 | WP_001270411.1 | hypothetical protein | - |
| DUT84_RS25330 () | 96492..97349 | - | 858 | WP_001167032.1 | hypothetical protein | - |
| DUT84_RS25335 () | 97336..97566 | - | 231 | WP_000972663.1 | hypothetical protein | - |
| DUT84_RS25340 () | 97566..98084 | - | 519 | WP_000210756.1 | nitrite reductase | - |
| DUT84_RS25345 () | 98081..98527 | - | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| DUT84_RS25350 () | 98527..98886 | - | 360 | WP_000422768.1 | hypothetical protein | - |
| DUT84_RS25355 () | 98943..99371 | - | 429 | WP_000591074.1 | hypothetical protein | - |
| DUT84_RS25360 () | 99405..100265 | - | 861 | WP_000139698.1 | DsbA family protein | - |
| DUT84_RS25365 () | 100281..101240 | - | 960 | WP_000829616.1 | S49 family peptidase | - |
| DUT84_RS25370 () | 101240..102094 | - | 855 | WP_000539392.1 | hypothetical protein | - |
| DUT84_RS25375 () | 102099..102392 | - | 294 | WP_001370730.1 | hypothetical protein | - |
| DUT84_RS25380 () | 102403..102876 | - | 474 | WP_000057877.1 | hypothetical protein | - |
| DUT84_RS25385 () | 102973..103494 | - | 522 | WP_000805800.1 | hypothetical protein | - |
| DUT84_RS25390 () | 103497..104018 | - | 522 | WP_000393785.1 | hypothetical protein | - |
| DUT84_RS25395 () | 104023..104631 | - | 609 | WP_000849071.1 | hypothetical protein | - |
| DUT84_RS25400 () | 104900..106015 | + | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| DUT84_RS25405 () | 106033..106467 | + | 435 | WP_000883925.1 | hypothetical protein | - |
| DUT84_RS25420 () | 107504..108604 | - | 1101 | WP_000350011.1 | plasmid replication protein | - |
| DUT84_RS25425 () | 108589..108876 | - | 288 | WP_000127321.1 | hypothetical protein | - |
| DUT84_RS25430 () | 108881..109420 | - | 540 | WP_001447712.1 | hypothetical protein | - |
| DUT84_RS25435 () | 109919..110902 | + | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| DUT84_RS25440 () | 110919..111212 | + | 294 | WP_000919078.1 | hypothetical protein | - |
| DUT84_RS25445 () | 111214..111633 | + | 420 | WP_000651490.1 | H-NS histone family protein | - |
| DUT84_RS25450 () | 111693..112244 | - | 552 | WP_001020646.1 | hypothetical protein | - |
| DUT84_RS25455 () | 112241..112849 | - | 609 | WP_000891157.1 | hypothetical protein | - |
| DUT84_RS25460 () | 112860..113393 | - | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| DUT84_RS25465 () | 113393..113665 | - | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| DUT84_RS25470 () | 114381..114743 | + | 363 | WP_000683483.1 | hypothetical protein | - |
| DUT84_RS25475 () | 114781..118395 | - | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DUT84_RS25480 () | 118408..119841 | - | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| DUT84_RS25485 () | 119843..120883 | - | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| DUT84_RS25490 () | 120994..122505 | - | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| DUT84_RS25500 () | 122792..123832 | - | 1041 | WP_000101568.1 | DNA-binding protein | - |
| DUT84_RS25505 () | 123994..124869 | - | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| DUT84_RS25510 () | 125196..125687 | - | 492 | WP_000139717.1 | hypothetical protein | - |
| DUT84_RS25515 () | 125684..126553 | - | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| DUT84_RS25520 () | 126558..127568 | - | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| DUT84_RS25525 () | 127571..128107 | - | 537 | WP_000949433.1 | hypothetical protein | - |
| DUT84_RS25535 () | 128406..128687 | - | 282 | WP_000575657.1 | hypothetical protein | - |
| DUT84_RS25540 () | 128949..129551 | + | 603 | WP_000278322.1 | hypothetical protein | - |
| DUT84_RS25545 () | 129567..130019 | - | 453 | WP_000791469.1 | hypothetical protein | - |
| DUT84_RS25550 () | 130186..130485 | - | 300 | WP_011872911.1 | hypothetical protein | - |
| DUT84_RS25555 () | 130781..131053 | - | 273 | WP_000787563.1 | MafI family immunity protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|