MGE detailed information
MGE type: Prophage MGE length: 28699 bp
Accession: NZ_CP031105 Location: 4488563..4517261 Organism: Escherichia coli strain AMSCJX02 Replicon: chromosome
Accession: NZ_CP031105 Location: 4488563..4517261 Organism: Escherichia coli strain AMSCJX02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DUT84_RS29010 () | 4484552..4484599 | + | 48 | WP_211180494.1 | protein YnaN | - |
| DUT84_RS23120 () | 4484613..4485596 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| DUT84_RS23130 () | 4486074..4487447 | + | 1374 | WP_000123719.1 | ATP-dependent RNA helicase DbpA | - |
| DUT84_RS23135 () | 4487576..4488511 | - | 936 | WP_001157408.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| DUT84_RS23140 () | 4488563..4489798 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| DUT84_RS23145 () | 4489800..4490015 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| DUT84_RS23150 () | 4490094..4490303 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 4490119..4490297 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4490119..4490297 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4490119..4490297 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 4490119..4490297 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| DUT84_RS23155 () | 4490296..4490490 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| DUT84_RS23160 () | 4490547..4491356 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| DUT84_RS23165 () | 4491349..4493949 | - | 2601 | WP_000105139.1 | exodeoxyribonuclease VIII | - |
| DUT84_RS23170 () | 4494051..4494326 | - | 276 | WP_000632297.1 | protein RacC | - |
| DUT84_RS23175 () | 4494401..4494571 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| DUT84_RS23180 () | 4494571..4494792 | - | 222 | WP_112021577.1 | killing protein KilR | - |
| DUT84_RS23190 () | 4495234..4495722 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| DUT84_RS23195 () | 4495719..4495874 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| DUT84_RS23200 () | 4495885..4496064 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| DUT84_RS23210 () | 4496307..4496726 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| DUT84_RS23215 () | 4496806..4497060 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| DUT84_RS23220 () | 4497057..4497479 | + | 423 | WP_000693800.1 | hypothetical protein | - |
| DUT84_RS23225 () | 4497557..4498345 | + | 789 | WP_001326319.1 | hypothetical protein | - |
| DUT84_RS23230 () | 4498352..4499098 | + | 747 | WP_000788982.1 | ATP-binding protein | - |
| DUT84_RS23235 () | 4499121..4499846 | + | 726 | WP_000450652.1 | DUF1627 domain-containing protein | - |
| DUT84_RS23240 () | 4499863..4500285 | + | 423 | WP_001151415.1 | DUF977 family protein | - |
| DUT84_RS23245 () | 4500422..4500694 | - | 273 | WP_000686865.1 | hypothetical protein | - |
| DUT84_RS23250 () | 4500965..4501633 | + | 669 | WP_000214879.1 | epoxyqueuosine reductase QueH | - |
| DUT84_RS23255 () | 4502245..4502583 | - | 339 | WP_001326322.1 | DUF1971 domain-containing protein | - |
| DUT84_RS23260 () | 4503454..4504053 | + | 600 | WP_000940312.1 | DUF1367 family protein | - |
| DUT84_RS23265 () | 4504053..4504343 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| DUT84_RS23270 () | 4504340..4504882 | + | 543 | WP_000640107.1 | DUF1133 family protein | - |
| DUT84_RS23285 () | 4506168..4506383 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| DUT84_RS23290 () | 4506383..4506880 | + | 498 | WP_001135296.1 | lysozyme RrrD | - |
| DUT84_RS23300 () | 4507097..4507282 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| DUT84_RS23305 () | 4507479..4508936 | + | 1458 | WP_001697073.1 | Trk system potassium transporter TrkG | - |
| DUT84_RS23315 () | 4509074..4509862 | + | 789 | WP_001291108.1 | ParB/Srx family N-terminal domain-containing protein | - |
| DUT84_RS23320 () | 4509855..4510556 | + | 702 | Protein_4236 | hypothetical protein | - |
| DUT84_RS23325 () | 4510540..4511487 | + | 948 | WP_170940253.1 | DUF1983 domain-containing protein | - |
| DUT84_RS23330 () | 4511555..4512154 | + | 600 | WP_001228247.1 | Outer membrane protein X | VF |
| DUT84_RS23335 () | 4512219..4514594 | + | 2376 | WP_000741769.1 | prophage tail fiber N-terminal domain-containing protein | - |
| DUT84_RS23340 () | 4514594..4514899 | + | 306 | WP_114455226.1 | hypothetical protein | - |
| DUT84_RS23345 () | 4514941..4516169 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| DUT84_RS23350 () | 4516221..4517261 | + | 1041 | WP_001326214.1 | tail fiber domain-containing protein | - |
| DUT84_RS23355 () | 4517304..4517597 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| DUT84_RS23360 () | 4517617..4517736 | + | 120 | Protein_4244 | tail fiber assembly protein | - |
| DUT84_RS23370 () | 4517949..4518806 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| DUT84_RS23375 () | 4518803..4519660 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| DUT84_RS23380 () | 4519657..4520484 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| DUT84_RS23385 () | 4520484..4521398 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|