MGE detailed information
MGE type: Prophage MGE length: 43696 bp
Accession: NZ_CP030919 Location: 1405513..1449208 Organism: Escherichia coli strain KL53 Replicon: chromosome
Accession: NZ_CP030919 Location: 1405513..1449208 Organism: Escherichia coli strain KL53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPT07_RS07520 () | 1401412..1402632 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| CPT07_RS07525 () | 1402757..1403452 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| CPT07_RS07530 () | 1403405..1404697 | - | 1293 | WP_072048910.1 | voltage-gated ClC-type chloride channel ClcB | - |
| CPT07_RS07535 () | 1404856..1405470 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| CPT07_RS07540 () | 1405513..1406367 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CPT07_RS07545 () | 1406369..1406986 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| CPT07_RS07550 () | 1406997..1409420 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| CPT07_RS07555 () | 1409481..1411907 | - | 2427 | WP_097360006.1 | dimethyl sulfoxide reductase subunit A | - |
| CPT07_RS07560 () | 1412106..1412411 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| CPT07_RS07575 () | 1413885..1414565 | + | 681 | WP_071586746.1 | YnfC family lipoprotein | - |
| CPT07_RS07580 () | 1414568..1415128 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CPT07_RS07585 () | 1415163..1415504 | - | 342 | WP_044864500.1 | DUF1283 family protein | - |
| CPT07_RS07590 () | 1415639..1415965 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| CPT07_RS07600 () | 1416171..1417385 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CPT07_RS07605 () | 1417397..1418416 | + | 1020 | WP_000836064.1 | Zn-dependent oxidoreductase | - |
| CPT07_RS07615 () | 1418604..1419884 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CPT07_RS07620 () | 1419919..1420170 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CPT07_RS07625 () | 1420243..1422714 | - | 2472 | WP_000048342.1 | exonuclease | - |
| CPT07_RS07630 () | 1422807..1422998 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| CPT07_RS07635 () | 1422995..1423183 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CPT07_RS07640 () | 1423267..1423620 | + | 354 | Protein_1385 | hypothetical protein | - |
| CPT07_RS07645 () | 1423661..1424083 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| CPT07_RS07650 () | 1424080..1424436 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| CPT07_RS28020 () | 1425047..1425334 | + | 288 | Protein_1388 | hypothetical protein | - |
| CPT07_RS07665 () | 1426103..1427416 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CPT07_RS07675 () | 1427853..1428185 | - | 333 | WP_001301033.1 | protein FlxA | - |
| CPT07_RS07680 () | 1428388..1428693 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| CPT07_RS07685 () | 1428718..1428957 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CPT07_RS07690 () | 1428957..1429244 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CPT07_RS07695 () | 1429316..1429471 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CPT07_RS07700 () | 1429688..1429939 | + | 252 | WP_097360105.1 | hypothetical protein | - |
| CPT07_RS07705 () | 1430006..1430284 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| CPT07_RS07710 () | 1430286..1430897 | + | 612 | Protein_1397 | DUF968 domain-containing protein | - |
| CPT07_RS07720 () | 1432208..1432648 | + | 441 | Protein_1399 | DUF968 domain-containing protein | - |
| CPT07_RS07725 () | 1432662..1433414 | + | 753 | WP_001047135.1 | antitermination protein | - |
| CPT07_RS27790 () | 1433692..1433781 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| CPT07_RS07730 () | 1433836..1434048 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CPT07_RS07735 () | 1434349..1434564 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CPT07_RS28155 () | 1434928..1435098 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CPT07_RS07740 () | 1435318..1435533 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CPT07_RS07745 () | 1435538..1435849 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| CPT07_RS07750 () | 1435846..1436379 | + | 534 | WP_001092971.1 | lysozyme | - |
| CPT07_RS07755 () | 1436376..1436873 | + | 498 | WP_028985485.1 | DUF2514 domain-containing protein | - |
| CPT07_RS07760 () | 1437236..1437448 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CPT07_RS07765 () | 1437459..1437647 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| CPT07_RS27795 () | 1437650..1437715 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| CPT07_RS27800 () | 1437795..1437950 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| CPT07_RS07775 () | 1438122..1438295 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CPT07_RS07780 () | 1438447..1438857 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CPT07_RS07785 () | 1438915..1439148 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CPT07_RS07795 () | 1439537..1439773 | + | 237 | Protein_1416 | DNA-packaging protein | - |
| CPT07_RS07800 () | 1439773..1441479 | + | 1707 | Protein_1417 | phage terminase large subunit family protein | - |
| CPT07_RS28025 () | 1441474..1441797 | + | 324 | Protein_1418 | DUF1983 domain-containing protein | - |
| CPT07_RS07805 () | 1441833..1442678 | + | 846 | WP_064761842.1 | phage tail protein | - |
| CPT07_RS07810 () | 1442678..1443253 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| CPT07_RS07815 () | 1443351..1443941 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CPT07_RS07820 () | 1444258..1444491 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CPT07_RS27805 () | 1444560..1444673 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CPT07_RS07830 () | 1445275..1446558 | + | 1284 | Protein_1424 | MHS family MFS transporter YdfJ | - |
| CPT07_RS07835 () | 1446647..1448107 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| CPT07_RS07840 () | 1448143..1448346 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CPT07_RS07845 () | 1448522..1449208 | - | 687 | WP_024240468.1 | DNA-binding transcriptional regulator YdfH | - |
| CPT07_RS07850 () | 1449297..1450043 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CPT07_RS07860 () | 1450180..1452225 | + | 2046 | WP_044066441.1 | peptidyl-dipeptidase Dcp | - |
| CPT07_RS07870 () | 1452270..1452788 | - | 519 | WP_044066442.1 | 2-oxo-tetronate isomerase | - |
| CPT07_RS07875 () | 1453064..1453456 | + | 393 | WP_085381403.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|