MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86128 bp
Accession: NZ_CP030911 Location: 5555242..5641369 Organism: Pseudomonas aeruginosa strain Y71 Replicon: chromosome
Accession: NZ_CP030911 Location: 5555242..5641369 Organism: Pseudomonas aeruginosa strain Y71 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ysp71_RS26755 () | 5550940..5555013 | + | 4074 | WP_023082028.1 | two-partner secretion system exoprotein TpsA4 | - |
| Ysp71_RS26760 () | 5555379..5556245 | + | 867 | WP_003111785.1 | ParA family protein | - |
| Ysp71_RS26765 () | 5556247..5556984 | + | 738 | WP_004347984.1 | hypothetical protein | - |
| Ysp71_RS26770 () | 5556981..5557478 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| Ysp71_RS26775 () | 5557531..5558202 | + | 672 | WP_071535208.1 | Lar family restriction alleviation protein | - |
| Ysp71_RS26780 () | 5558202..5558903 | + | 702 | WP_021205064.1 | DUF2786 domain-containing protein | - |
| Ysp71_RS26785 () | 5558900..5559607 | + | 708 | WP_003122069.1 | HNH endonuclease | - |
| Ysp71_RS26790 () | 5559591..5559809 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| Ysp71_RS26795 () | 5559806..5561152 | + | 1347 | WP_023911889.1 | replicative DNA helicase | - |
| Ysp71_RS26800 () | 5561149..5561334 | + | 186 | WP_023911888.1 | hypothetical protein | - |
| Ysp71_RS26805 () | 5561324..5561851 | + | 528 | WP_023911886.1 | hypothetical protein | - |
| Ysp71_RS26810 () | 5561848..5562105 | + | 258 | WP_004347980.1 | hypothetical protein | - |
| Ysp71_RS33750 () | 5562098..5562592 | + | 495 | WP_004347979.1 | hypothetical protein | - |
| Ysp71_RS26815 () | 5562585..5562818 | + | 234 | WP_004347978.1 | hypothetical protein | - |
| Ysp71_RS26820 () | 5562818..5563840 | + | 1023 | WP_023911882.1 | nucleoid-associated protein YejK | - |
| Ysp71_RS26825 () | 5563837..5564727 | + | 891 | WP_003117034.1 | DNA adenine methylase | - |
| Ysp71_RS26830 () | 5564748..5565017 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| Ysp71_RS26835 () | 5565014..5566750 | + | 1737 | WP_023657786.1 | ParB family protein | - |
| Ysp71_RS26840 () | 5566778..5567545 | + | 768 | WP_003134101.1 | DUF2857 domain-containing protein | - |
| Ysp71_RS26845 () | 5567542..5568867 | + | 1326 | WP_023132182.1 | hypothetical protein | - |
| Ysp71_RS26855 () | 5569407..5569604 | + | 198 | WP_023129302.1 | hypothetical protein | - |
| Ysp71_RS26860 () | 5569761..5570489 | + | 729 | WP_031275718.1 | TIGR03761 family integrating conjugative element protein | - |
| Ysp71_RS26865 () | 5570495..5571043 | + | 549 | WP_023911877.1 | DUF3158 family protein | - |
| Ysp71_RS26870 () | 5571091..5571921 | + | 831 | WP_023911875.1 | Rha family transcriptional regulator | - |
| Ysp71_RS26875 () | 5571951..5572439 | + | 489 | WP_023911873.1 | single-stranded DNA-binding protein | - |
| Ysp71_RS26880 () | 5572696..5572863 | + | 168 | WP_128729268.1 | CrpP family protein | - |
| Ysp71_RS26885 () | 5572979..5574898 | + | 1920 | WP_031275716.1 | type I DNA topoisomerase | - |
| Ysp71_RS26890 () | 5575141..5577018 | + | 1878 | WP_023911870.1 | hypothetical protein | - |
| Ysp71_RS26895 () | 5577015..5578991 | + | 1977 | WP_031275715.1 | DEAD/DEAH box helicase | - |
| Ysp71_RS26900 () | 5579132..5579476 | + | 345 | WP_003448665.1 | hypothetical protein | - |
| Ysp71_RS26905 () | 5579547..5579837 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| Ysp71_RS26910 () | 5579834..5580133 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Ysp71_RS26915 () | 5580334..5581458 | + | 1125 | WP_023435880.1 | Multidrug resistance protein MdtB | VF |
| Ysp71_RS26920 () | 5581458..5583167 | + | 1710 | WP_023435879.1 | Outer membrane lipoprotein BfpB | VF |
| Ysp71_RS26925 () | 5583171..5584496 | + | 1326 | WP_023435878.1 | type 4b pilus protein PilO2 | - |
| Ysp71_RS26930 () | 5584486..5585019 | + | 534 | WP_023435877.1 | type IV pilus biogenesis protein PilP | - |
| Ysp71_RS26935 () | 5585028..5586608 | + | 1581 | WP_174557987.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| Ysp71_RS26940 () | 5586608..5587687 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| Ysp71_RS26945 () | 5587709..5588239 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| Ysp71_RS26950 () | 5588236..5589192 | + | 957 | WP_115747677.1 | Flp pilus assembly complex ATPase component TadA | - |
| Ysp71_RS26955 () | 5589185..5590564 | + | 1380 | WP_022579630.1 | Serine/threonine transporter SstT | VF |
| Ysp71_RS26960 () | 5590582..5591019 | + | 438 | WP_023093677.1 | S-ribosylhomocysteine lyase | VF |
| Ysp71_RS26970 () | 5592020..5592994 | + | 975 | WP_003149531.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| Ysp71_RS26980 () | 5593304..5593870 | + | 567 | WP_003149536.1 | hypothetical protein | - |
| Ysp71_RS33755 () | 5593945..5594121 | + | 177 | WP_003149538.1 | hypothetical protein | - |
| Ysp71_RS26985 () | 5594583..5595071 | + | 489 | WP_023093679.1 | DUF3577 domain-containing protein | - |
| Ysp71_RS33760 () | 5595208..5595366 | + | 159 | WP_003134147.1 | hypothetical protein | - |
| Ysp71_RS26990 () | 5595441..5595638 | + | 198 | WP_003149542.1 | hypothetical protein | - |
| Ysp71_RS26995 () | 5595758..5596465 | + | 708 | WP_023093680.1 | hypothetical protein | - |
| Ysp71_RS27000 () | 5596701..5597051 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| Ysp71_RS27005 () | 5597108..5597740 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| Ysp71_RS27010 () | 5597737..5598012 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| Ysp71_RS27015 () | 5598082..5598444 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| Ysp71_RS27020 () | 5598512..5598772 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| Ysp71_RS27025 () | 5598865..5599470 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| Ysp71_RS27030 () | 5599500..5600945 | + | 1446 | WP_003099801.1 | class I SAM-dependent methyltransferase | - |
| Ysp71_RS27035 () | 5601050..5603299 | + | 2250 | WP_029771374.1 | DEAD/DEAH box helicase | - |
| Ysp71_RS33765 () | 5603458..5603769 | + | 312 | WP_124014672.1 | FxLYD domain-containing protein | - |
| Ysp71_RS27040 () | 5603884..5604417 | - | 534 | WP_124014673.1 | hypothetical protein | - |
| Ysp71_RS27045 () | 5604490..5605749 | - | 1260 | WP_023093866.1 | S1 family peptidase | - |
| Ysp71_RS27050 () | 5606191..5606829 | + | 639 | WP_063879068.1 | hypothetical protein | - |
| Ysp71_RS27055 () | 5606840..5607595 | + | 756 | WP_025297849.1 | TIGR03759 family integrating conjugative element protein | - |
| Ysp71_RS27060 () | 5607580..5608161 | + | 582 | WP_003121011.1 | hypothetical protein | VF |
| Ysp71_RS27065 () | 5608158..5608658 | + | 501 | WP_003121012.1 | integrating conjugative element protein | - |
| Ysp71_RS27070 () | 5608667..5608936 | + | 270 | WP_023082675.1 | hypothetical protein | - |
| Ysp71_RS27075 () | 5608940..5611171 | + | 2232 | WP_023082676.1 | type IV conjugative transfer system coupling protein TraD | - |
| Ysp71_RS27080 () | 5611171..5611917 | + | 747 | WP_009316301.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| Ysp71_RS27085 () | 5611935..5612426 | + | 492 | WP_115747659.1 | hypothetical protein | - |
| Ysp71_RS27090 () | 5612667..5614148 | + | 1482 | WP_012076865.1 | UvrD-helicase domain-containing protein | - |
| Ysp71_RS33770 () | 5614279..5615388 | + | 1110 | WP_012076866.1 | hypothetical protein | - |
| Ysp71_RS27100 () | 5615433..5615744 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| Ysp71_RS27105 () | 5615917..5616216 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| Ysp71_RS27110 () | 5616310..5616648 | + | 339 | WP_012076868.1 | RAQPRD family integrative conjugative element protein | - |
| Ysp71_RS27115 () | 5616645..5616884 | + | 240 | WP_012076869.1 | TIGR03758 family integrating conjugative element protein | - |
| Ysp71_RS27120 () | 5616902..5617258 | + | 357 | WP_012076870.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| Ysp71_RS27125 () | 5617269..5617655 | + | 387 | WP_012076871.1 | TIGR03750 family conjugal transfer protein | - |
| Ysp71_RS27130 () | 5617652..5618311 | + | 660 | WP_003156959.1 | TIGR03746 family integrating conjugative element protein | - |
| Ysp71_RS27135 () | 5618308..5619192 | + | 885 | WP_012076872.1 | TIGR03749 family integrating conjugative element protein | - |
| Ysp71_RS27140 () | 5619176..5620681 | + | 1506 | WP_012076873.1 | TIGR03752 family integrating conjugative element protein | - |
| Ysp71_RS27145 () | 5620659..5621102 | + | 444 | WP_012076874.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| Ysp71_RS27150 () | 5621249..5624053 | + | 2805 | WP_025297860.1 | conjugative transfer ATPase | - |
| Ysp71_RS27155 () | 5624050..5624334 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| Ysp71_RS27160 () | 5624331..5624993 | + | 663 | WP_023082678.1 | DsbA family protein | - |
| Ysp71_RS33775 () | 5625039..5625881 | - | 843 | WP_023082679.1 | hypothetical protein | - |
| Ysp71_RS27165 () | 5625966..5626335 | + | 370 | Protein_5247 | thioredoxin domain-containing protein | - |
| Ysp71_RS27170 () | 5626332..5626550 | - | 219 | WP_023082680.1 | hypothetical protein | - |
| Ysp71_RS27175 () | 5626759..5627190 | + | 432 | WP_025297859.1 | TIGR03757 family integrating conjugative element protein | - |
| Ysp71_RS27180 () | 5627190..5628128 | + | 939 | WP_012076879.1 | TIGR03756 family integrating conjugative element protein | - |
| Ysp71_RS27185 () | 5628146..5629528 | + | 1383 | WP_116560594.1 | integrating conjugative element protein | - |
| Ysp71_RS27190 () | 5629528..5629875 | + | 348 | WP_012076881.1 | hypothetical protein | - |
| Ysp71_RS27195 () | 5629872..5631386 | + | 1515 | WP_033896058.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Ysp71_RS27200 () | 5631553..5631780 | - | 228 | Protein_5254 | hypothetical protein | - |
| Ysp71_RS27205 () | 5631899..5632171 | + | 273 | WP_025297856.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| Ysp71_RS27210 () | 5632175..5632534 | + | 360 | WP_025297855.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Ysp71_RS27215 () | 5632544..5633461 | - | 918 | WP_023082681.1 | hypothetical protein | - |
| Ysp71_RS27220 () | 5633487..5633726 | - | 240 | WP_023082682.1 | hypothetical protein | - |
| Ysp71_RS27225 () | 5634219..5634554 | + | 336 | WP_023105889.1 | IS66 family transposase ISSal1 | Transposase |
| Ysp71_RS27230 () | 5634590..5634886 | + | 297 | WP_196612410.1 | IS66 family transposase ISPpu30 | Transposase |
| Ysp71_RS27235 () | 5634950..5636461 | + | 1512 | WP_023105887.1 | IS66 family transposase ISPsy43 | Transposase |
| Ysp71_RS27240 () | 5636479..5637608 | + | 1130 | Protein_5262 | IS256 family transposase ISRso7 | Transposase |
| Ysp71_RS27245 () | 5637768..5639690 | + | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| Ysp71_RS27250 () | 5639687..5640988 | + | 1302 | WP_003454526.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| Ysp71_RS27270 () | 5641807..5644371 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| Ysp71_RS27275 () | 5644527..5645255 | - | 729 | WP_003119426.1 | peptidoglycan editing factor PgeF | - |
| Ysp71_RS27280 () | 5645252..5646214 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|