MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 106503 bp
Accession: NZ_CP030910 Location: 1166409..1272911 Organism: Pseudomonas aeruginosa strain Y31 Replicon: chromosome
Accession: NZ_CP030910 Location: 1166409..1272911 Organism: Pseudomonas aeruginosa strain Y31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y31_RS05665 () | 1162070..1163368 | + | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
| Y31_RS05670 () | 1163421..1163927 | + | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| Y31_RS05675 () | 1163937..1164761 | + | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| Y31_RS05680 () | 1164981..1165628 | + | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| Y31_RS05685 () | 1165644..1166318 | + | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| Y31_RS05695 () | 1166823..1168106 | - | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| Y31_RS05700 () | 1168103..1170022 | - | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| Y31_RS32555 () | 1170021..1170173 | + | 153 | WP_153274499.1 | hypothetical protein | - |
| Y31_RS32560 () | 1170234..1170590 | - | 357 | WP_015060180.1 | hypothetical protein | - |
| Y31_RS05705 () | 1170978..1172171 | + | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| Y31_RS05710 () | 1172327..1174345 | - | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| Y31_RS05715 () | 1174454..1174948 | - | 495 | WP_003158140.1 | hypothetical protein | - |
| Y31_RS05720 () | 1175052..1175414 | - | 363 | WP_003125106.1 | hypothetical protein | - |
| Y31_RS05725 () | 1175485..1176213 | - | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| Y31_RS05730 () | 1176419..1176643 | - | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| Y31_RS05735 () | 1176657..1176920 | - | 264 | WP_003125104.1 | hypothetical protein | - |
| Y31_RS05740 () | 1177485..1185998 | + | 8514 | WP_115759860.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| Y31_RS05745 () | 1186376..1186726 | - | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Y31_RS05750 () | 1186730..1187002 | - | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| Y31_RS05755 () | 1187121..1187474 | + | 354 | WP_003158143.1 | hypothetical protein | - |
| Y31_RS05760 () | 1187504..1189039 | - | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Y31_RS05765 () | 1189036..1189383 | - | 348 | WP_009875851.1 | hypothetical protein | - |
| Y31_RS05770 () | 1189383..1190765 | - | 1383 | WP_023131541.1 | integrating conjugative element protein | - |
| Y31_RS05775 () | 1190783..1191721 | - | 939 | WP_009875853.1 | TIGR03756 family integrating conjugative element protein | - |
| Y31_RS05780 () | 1191721..1192152 | - | 432 | WP_025982308.1 | TIGR03757 family integrating conjugative element protein | - |
| Y31_RS32565 () | 1192691..1193938 | + | 1248 | WP_023131540.1 | hypothetical protein | - |
| Y31_RS05785 () | 1193939..1194799 | - | 861 | WP_071536658.1 | DNA adenine methylase | - |
| Y31_RS05790 () | 1194903..1195586 | - | 684 | WP_023129331.1 | DsbA family protein | - |
| Y31_RS05795 () | 1195583..1195867 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| Y31_RS05800 () | 1195864..1198806 | - | 2943 | WP_023131539.1 | conjugative transfer ATPase | - |
| Y31_RS05805 () | 1198806..1199249 | - | 444 | WP_023101461.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| Y31_RS05810 () | 1199227..1200732 | - | 1506 | WP_023129329.1 | TIGR03752 family integrating conjugative element protein | - |
| Y31_RS05815 () | 1200716..1201600 | - | 885 | WP_023129328.1 | TIGR03749 family integrating conjugative element protein | - |
| Y31_RS05820 () | 1201597..1202256 | - | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| Y31_RS05825 () | 1202253..1202639 | - | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| Y31_RS05830 () | 1202650..1203006 | - | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| Y31_RS05835 () | 1203024..1203263 | - | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| Y31_RS05840 () | 1203260..1203598 | - | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| Y31_RS05845 () | 1203692..1203991 | - | 300 | WP_003125328.1 | hypothetical protein | - |
| Y31_RS05850 () | 1204164..1204475 | + | 312 | WP_003109392.1 | DUF2845 domain-containing protein | - |
| Y31_RS32570 () | 1204520..1205629 | - | 1110 | WP_003125327.1 | hypothetical protein | - |
| Y31_RS05860 () | 1205761..1207242 | - | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| Y31_RS05865 () | 1207253..1207999 | - | 747 | WP_003159693.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| Y31_RS05870 () | 1207999..1210230 | - | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| Y31_RS05875 () | 1210234..1210440 | - | 207 | WP_073689213.1 | hypothetical protein | - |
| Y31_RS05880 () | 1210512..1211012 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| Y31_RS05885 () | 1211009..1211590 | - | 582 | WP_003123352.1 | hypothetical protein | VF |
| Y31_RS05890 () | 1211575..1212330 | - | 756 | WP_003125319.1 | TIGR03759 family integrating conjugative element protein | - |
| Y31_RS05895 () | 1212341..1213033 | - | 693 | WP_003123350.1 | hypothetical protein | - |
| Y31_RS05900 () | 1213251..1213523 | + | 273 | WP_003125312.1 | hypothetical protein | - |
| Y31_RS05905 () | 1214095..1214655 | + | 561 | WP_003125311.1 | hypothetical protein | - |
| Y31_RS05910 () | 1214648..1215061 | + | 414 | WP_015060171.1 | hypothetical protein | - |
| Y31_RS05915 () | 1215217..1216002 | + | 786 | WP_003125309.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| Y31_RS05920 () | 1216065..1216625 | + | 561 | WP_015060170.1 | HTH-type transcriptional regulator CymR | VF |
| Y31_RS05925 () | 1216720..1217061 | + | 342 | WP_003125308.1 | carboxymuconolactone decarboxylase family protein | - |
| Y31_RS05930 () | 1217114..1217785 | + | 672 | WP_016561615.1 | DsbA family oxidoreductase | - |
| Y31_RS05935 () | 1217853..1218407 | + | 555 | WP_003125306.1 | OsmC family protein | - |
| Y31_RS05940 () | 1218449..1219546 | + | 1098 | WP_003125305.1 | alkene reductase | - |
| Y31_RS05945 () | 1219596..1219811 | + | 216 | WP_003159697.1 | 4-oxalocrotonate tautomerase family protein | - |
| Y31_RS05950 () | 1220048..1221229 | + | 1182 | WP_025982309.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| Y31_RS05955 () | 1221377..1221811 | + | 435 | WP_169433239.1 | hypothetical protein | - |
| Y31_RS05960 () | 1221913..1224162 | - | 2250 | WP_003159705.1 | DEAD/DEAH box helicase | - |
| Y31_RS05965 () | 1224267..1225712 | - | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| Y31_RS05970 () | 1225742..1226347 | - | 606 | WP_003125296.1 | hypothetical protein | - |
| Y31_RS05975 () | 1226440..1226694 | - | 255 | WP_003117062.1 | hypothetical protein | - |
| Y31_RS05980 () | 1226762..1227124 | - | 363 | WP_003117061.1 | hypothetical protein | - |
| Y31_RS05985 () | 1227227..1228018 | - | 792 | WP_009875865.1 | DUF3275 family protein | - |
| Y31_RS05990 () | 1228075..1228425 | - | 351 | WP_004347949.1 | hypothetical protein | - |
| Y31_RS05995 () | 1228661..1229368 | - | 708 | WP_015503589.1 | hypothetical protein | - |
| Y31_RS06005 () | 1229853..1230050 | - | 198 | WP_009315817.1 | hypothetical protein | - |
| Y31_RS32705 () | 1230124..1230282 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| Y31_RS06010 () | 1230420..1230899 | - | 480 | WP_009875866.1 | DUF3577 domain-containing protein | - |
| Y31_RS32710 () | 1231360..1231536 | - | 177 | WP_015503587.1 | hypothetical protein | - |
| Y31_RS32715 () | 1231611..1231856 | - | 246 | WP_009875867.1 | hypothetical protein | - |
| Y31_RS06025 () | 1232922..1233359 | - | 438 | WP_009875868.1 | hypothetical protein | VF |
| Y31_RS06030 () | 1233388..1234716 | - | 1329 | WP_003109362.1 | hypothetical protein | VF |
| Y31_RS06035 () | 1234721..1235662 | - | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| Y31_RS06040 () | 1235659..1236189 | - | 531 | WP_003099765.1 | hypothetical protein | VF |
| Y31_RS06045 () | 1236211..1237290 | - | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| Y31_RS06050 () | 1237290..1238870 | - | 1581 | WP_015060168.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| Y31_RS06055 () | 1238879..1239412 | - | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| Y31_RS06060 () | 1239402..1240727 | - | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| Y31_RS06065 () | 1240731..1242440 | - | 1710 | WP_003099757.1 | Outer membrane lipoprotein BfpB | VF |
| Y31_RS06070 () | 1242440..1243564 | - | 1125 | WP_003099755.1 | hypothetical protein | VF |
| Y31_RS06075 () | 1243738..1244991 | - | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| Y31_RS06080 () | 1245024..1245806 | - | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| Y31_RS06085 () | 1245928..1247901 | - | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| Y31_RS06090 () | 1247898..1249787 | - | 1890 | WP_003105732.1 | hypothetical protein | - |
| Y31_RS06095 () | 1250008..1250217 | - | 210 | WP_003105733.1 | cold-shock protein | - |
| Y31_RS06100 () | 1250525..1252444 | - | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| Y31_RS06105 () | 1252700..1252930 | + | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| Y31_RS06110 () | 1252930..1253340 | + | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| Y31_RS06115 () | 1253362..1253622 | + | 261 | WP_003105742.1 | hypothetical protein | - |
| Y31_RS06125 () | 1253822..1254040 | + | 219 | WP_003105747.1 | hypothetical protein | - |
| Y31_RS06130 () | 1254106..1254351 | - | 246 | WP_023102333.1 | CrpP family protein | - |
| Y31_RS06135 () | 1254459..1254947 | - | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| Y31_RS06140 () | 1254977..1255816 | - | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| Y31_RS06145 () | 1255863..1256411 | - | 549 | WP_003105753.1 | DUF3158 family protein | - |
| Y31_RS06150 () | 1256417..1257145 | - | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| Y31_RS06155 () | 1257301..1257498 | - | 198 | WP_003105756.1 | hypothetical protein | - |
| Y31_RS06170 () | 1258468..1259793 | - | 1326 | WP_071534719.1 | hypothetical protein | - |
| Y31_RS06175 () | 1259796..1260551 | - | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| Y31_RS06180 () | 1260579..1262312 | - | 1734 | WP_003158178.1 | ParB family protein | - |
| Y31_RS06185 () | 1262309..1262557 | - | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| Y31_RS06190 () | 1262560..1263576 | - | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| Y31_RS06195 () | 1263576..1263809 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| Y31_RS32575 () | 1263802..1264299 | - | 498 | WP_003125258.1 | hypothetical protein | - |
| Y31_RS06200 () | 1264292..1264549 | - | 258 | WP_003103843.1 | hypothetical protein | - |
| Y31_RS06205 () | 1264546..1265073 | - | 528 | WP_003103844.1 | hypothetical protein | - |
| Y31_RS06210 () | 1265063..1265248 | - | 186 | WP_003103845.1 | hypothetical protein | - |
| Y31_RS32580 () | 1265426..1265872 | + | 447 | WP_016561619.1 | hypothetical protein | - |
| Y31_RS06220 () | 1266311..1267654 | - | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| Y31_RS06225 () | 1267651..1267869 | - | 219 | WP_003103847.1 | hypothetical protein | - |
| Y31_RS06230 () | 1267853..1268560 | - | 708 | WP_003103848.1 | HNH endonuclease | - |
| Y31_RS06235 () | 1268557..1269258 | - | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| Y31_RS06240 () | 1269258..1269944 | - | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| Y31_RS06245 () | 1269941..1270687 | - | 747 | WP_003159720.1 | hypothetical protein | - |
| Y31_RS06250 () | 1270693..1271190 | - | 498 | WP_003103852.1 | hypothetical protein | - |
| Y31_RS06255 () | 1271187..1271912 | - | 726 | WP_003103853.1 | hypothetical protein | - |
| Y31_RS06260 () | 1271914..1272774 | - | 861 | WP_003158180.1 | ParA family protein | - |
| Y31_RS06270 () | 1273140..1277339 | - | 4200 | WP_115759331.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|