MGE detailed information
MGE type: Prophage MGE length: 50852 bp
Accession: NZ_CP030778 Location: 893636..944487 Organism: Escherichia albertii strain 05-3106 Replicon: chromosome
Accession: NZ_CP030778 Location: 893636..944487 Organism: Escherichia albertii strain 05-3106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYM74_RS04440 () | 888986..890092 | + | 1107 | WP_001516209.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| CYM74_RS04445 () | 890128..890769 | + | 642 | WP_024164967.1 | high frequency lysogenization protein HflD | - |
| CYM74_RS04450 () | 890773..892143 | + | 1371 | WP_000423734.1 | adenylosuccinate lyase | - |
| CYM74_RS04455 () | 892311..892982 | + | 672 | WP_001265484.1 | two-component system response regulator PhoP | - |
| CYM74_RS04460 () | 892982..893623 | + | 642 | Protein_867 | two-component system sensor histidine kinase PhoQ | - |
| CYM74_RS04465 () | 893636..897109 | - | 3474 | WP_113622785.1 | host specificity protein J | - |
| CYM74_RS04475 () | 897453..898085 | - | 633 | WP_032300536.1 | tail assembly protein | - |
| CYM74_RS04480 () | 898031..898774 | - | 744 | WP_113622787.1 | C40 family peptidase | - |
| CYM74_RS04485 () | 898785..899483 | - | 699 | WP_001335877.1 | phage minor tail protein L | - |
| CYM74_RS04490 () | 899483..899812 | - | 330 | WP_000847298.1 | phage tail protein | - |
| CYM74_RS04495 () | 899809..902382 | - | 2574 | WP_113622788.1 | phage tail tape measure protein | - |
| CYM74_RS04500 () | 902363..902776 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| CYM74_RS04505 () | 902803..903234 | - | 432 | WP_001542190.1 | phage minor tail protein G | - |
| CYM74_RS04510 () | 903248..904000 | - | 753 | WP_000235110.1 | phage tail protein | - |
| CYM74_RS04515 () | 904008..904403 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| CYM74_RS04520 () | 904400..904975 | - | 576 | WP_000975010.1 | phage tail protein | - |
| CYM74_RS04525 () | 904991..905344 | - | 354 | WP_000752997.1 | head-tail joining protein | - |
| CYM74_RS04530 () | 905356..905742 | - | 387 | WP_113622789.1 | DNA-packaging protein FI | - |
| CYM74_RS04535 () | 905784..906809 | - | 1026 | WP_000063261.1 | major capsid protein | - |
| CYM74_RS04540 () | 906866..907198 | - | 333 | WP_001299443.1 | head decoration protein | - |
| CYM74_RS04545 () | 907208..908527 | - | 1320 | WP_016248240.1 | S49 family peptidase | - |
| CYM74_RS04550 () | 908508..910109 | - | 1602 | WP_016248239.1 | phage portal protein | - |
| CYM74_RS04555 () | 910106..910312 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CYM74_RS04560 () | 910309..912234 | - | 1926 | WP_016248238.1 | phage terminase large subunit family protein | - |
| CYM74_RS04565 () | 912209..912754 | - | 546 | WP_000867489.1 | terminase small subunit | - |
| CYM74_RS24140 () | 913196..913663 | - | 468 | WP_001082562.1 | lysis protein | - |
| CYM74_RS04575 () | 913962..914495 | - | 534 | WP_024239084.1 | lysozyme | - |
| CYM74_RS04580 () | 914546..914890 | - | 345 | WP_000731267.1 | YdfR family protein | - |
| CYM74_RS04585 () | 914895..915110 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| CYM74_RS04590 () | 915261..917117 | - | 1857 | WP_042020311.1 | SASA family carbohydrate esterase | - |
| CYM74_RS04595 () | 917378..917713 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| CYM74_RS04615 () | 918304..919353 | - | 1050 | WP_032304845.1 | site-specific DNA-methyltransferase | - |
| CYM74_RS04620 () | 919504..919701 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| CYM74_RS04625 () | 919928..920749 | - | 822 | WP_020233847.1 | antitermination protein | - |
| CYM74_RS04630 () | 920746..921120 | - | 375 | WP_001356201.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CYM74_RS04635 () | 921133..922179 | - | 1047 | WP_032304852.1 | DUF968 domain-containing protein | - |
| CYM74_RS04640 () | 922181..922453 | - | 273 | WP_032156820.1 | hypothetical protein | - |
| CYM74_RS04650 () | 922621..922776 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CYM74_RS04660 () | 923068..923970 | - | 903 | WP_000207977.1 | DUF551 domain-containing protein | - |
| CYM74_RS04665 () | 923981..924244 | - | 264 | WP_000224221.1 | hypothetical protein | - |
| CYM74_RS04670 () | 924246..924737 | - | 492 | WP_001167293.1 | hypothetical protein | - |
| CYM74_RS04675 () | 924740..925099 | - | 360 | WP_001289987.1 | hypothetical protein | - |
| CYM74_RS24145 () | 925096..925272 | - | 177 | WP_000753053.1 | hypothetical protein | - |
| CYM74_RS04680 () | 925265..925447 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| CYM74_RS04685 () | 925576..925887 | - | 312 | WP_113622790.1 | hypothetical protein | - |
| CYM74_RS04690 () | 925880..926134 | - | 255 | WP_000004324.1 | hypothetical protein | - |
| CYM74_RS04695 () | 926131..926553 | - | 423 | WP_001151132.1 | DUF977 family protein | - |
| CYM74_RS04700 () | 926594..927556 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| CYM74_RS04705 () | 927579..928004 | - | 426 | WP_000693845.1 | Rha family transcriptional regulator | - |
| CYM74_RS04710 () | 927988..928263 | - | 276 | WP_001048458.1 | helix-turn-helix domain-containing protein | - |
| CYM74_RS04715 () | 928371..928871 | + | 501 | WP_000824162.1 | helix-turn-helix transcriptional regulator | - |
| CYM74_RS04720 () | 928889..929080 | + | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| CYM74_RS04725 () | 929080..929370 | + | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CYM74_RS04730 () | 929640..929792 | + | 153 | WP_021538048.1 | DUF1391 family protein | - |
| CYM74_RS04735 () | 929804..930205 | + | 402 | WP_001339605.1 | hypothetical protein | - |
| CYM74_RS04740 () | 930165..930443 | - | 279 | WP_000358771.1 | hypothetical protein | - |
| CYM74_RS04750 () | 930991..932013 | + | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| CYM74_RS04755 () | 932010..932792 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| CYM74_RS04760 () | 932962..933150 | + | 189 | WP_000449172.1 | cell division inhibitor | - |
| CYM74_RS04765 () | 933147..933335 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| CYM74_RS04770 () | 933431..935902 | + | 2472 | WP_113622792.1 | exonuclease | - |
| CYM74_RS04775 () | 935964..936233 | + | 270 | WP_000003742.1 | excisionase | - |
| CYM74_RS04780 () | 936202..937320 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| CYM74_RS04785 () | 937487..938281 | + | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CYM74_RS04790 () | 938278..939324 | + | 1047 | WP_113622793.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CYM74_RS04795 () | 939382..939843 | + | 462 | WP_113622794.1 | DUF3592 domain-containing protein | - |
| CYM74_RS04800 () | 939840..940628 | + | 789 | WP_059225391.1 | TPM domain-containing protein | - |
| CYM74_RS04805 () | 940766..941587 | - | 822 | WP_000952753.1 | NAD-dependent protein deacylase | - |
| CYM74_RS04810 () | 941603..942514 | - | 912 | WP_025237155.1 | N-acetylglucosamine kinase | - |
| CYM74_RS04815 () | 942542..943786 | - | 1245 | WP_001251383.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CYM74_RS04820 () | 943786..944487 | - | 702 | WP_044713646.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| CYM74_RS04825 () | 944480..945679 | - | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| CYM74_RS04830 () | 946002..949448 | + | 3447 | WP_054410795.1 | transcription-repair coupling factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|