MGE detailed information
MGE type: IScluster/Tn MGE length: 21975 bp
Accession: NZ_CP030773 Location: 165231..187205 Organism: Shigella flexneri 1c strain Y394 Replicon: plasmid pINV-Y394
Accession: NZ_CP030773 Location: 165231..187205 Organism: Shigella flexneri 1c strain Y394 Replicon: plasmid pINV-Y394
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7485_RS24435 (B7485_26470) | 161452..162354 | + | 903 | WP_128567749.1 | DUF1281 domain-containing protein | - |
| B7485_RS24440 (B7485_26475) | 162351..162662 | + | 312 | WP_031942478.1 | hypothetical protein | - |
| B7485_RS24445 (B7485_26480) | 162726..163409 | + | 684 | WP_000086135.1 | DNA methylase | - |
| B7485_RS24450 (B7485_26485) | 163410..163631 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| B7485_RS24455 (B7485_26490) | 163591..164077 | + | 487 | Protein_194 | DUF1380 family protein | - |
| B7485_RS24460 (B7485_26495) | 164122..164892 | + | 771 | WP_001006196.1 | hypothetical protein | - |
| B7485_RS24470 (B7485_26505) | 165231..165950 | - | 720 | Protein_196 | IS110 family transposase | - |
| B7485_RS24475 (B7485_26510) | 165959..167560 | - | 1602 | WP_149528156.1 | IS66-like element ISSfl3 family transposase | - |
| B7485_RS24480 (B7485_26515) | 167557..167907 | - | 351 | WP_005048975.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| B7485_RS24485 (B7485_26520) | 167904..168578 | - | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| B7485_RS24490 (B7485_26525) | 168658..169700 | - | 1043 | Protein_200 | IS3-like element IS2 family transposase | - |
| B7485_RS24495 (B7485_26530) | 169788..170057 | - | 270 | Protein_201 | transposase | - |
| B7485_RS25335 | 170172..170810 | - | 639 | WP_000607008.1 | type III secretion system effector OspI | - |
| B7485_RS24505 (B7485_26540) | 170969..171439 | - | 471 | Protein_203 | IS1 family transposase | - |
| B7485_RS24515 (B7485_26550) | 171638..172312 | + | 675 | WP_004967157.1 | IS66-like element accessory protein TnpA | - |
| B7485_RS24520 (B7485_26555) | 172309..172659 | + | 351 | WP_005048975.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| B7485_RS24525 (B7485_26560) | 172656..173207 | + | 552 | Protein_206 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| B7485_RS24530 (B7485_26565) | 173265..174421 | + | 1157 | WP_134796986.1 | IS3 family transposase | - |
| B7485_RS24535 (B7485_26570) | 174465..175394 | + | 930 | Protein_208 | IS66-like element ISSfl3 family transposase | - |
| B7485_RS24540 (B7485_26575) | 175583..175768 | + | 186 | Protein_209 | ATP-binding protein | - |
| B7485_RS25890 (B7485_26580) | 175868..176073 | - | 206 | Protein_210 | peptidoglycan-binding protein | - |
| B7485_RS24550 (B7485_26585) | 176126..176377 | - | 252 | WP_001381727.1 | transporter | - |
| B7485_RS24560 (B7485_26595) | 176829..177113 | + | 285 | WP_024260696.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| B7485_RS24565 (B7485_26600) | 177113..177388 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B7485_RS24580 (B7485_26615) | 178367..179320 | + | 954 | Protein_215 | IS66 family transposase | - |
| B7485_RS24585 (B7485_26620) | 179856..180074 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| B7485_RS24590 (B7485_26625) | 180076..180381 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| B7485_RS24595 (B7485_26630) | 180405..180512 | + | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| B7485_RS24600 (B7485_26635) | 180774..182411 | + | 1638 | WP_000936806.1 | T3SS effector E3 ubiquitin-protein ligase IpaH9.8 | - |
| B7485_RS24605 (B7485_26640) | 182619..182888 | + | 270 | Protein_220 | type II toxin-antitoxin system antitoxin YacA | - |
| B7485_RS25895 | 182888..183057 | + | 170 | Protein_221 | type II toxin-antitoxin system toxin YacB | - |
| B7485_RS24615 (B7485_26650) | 183140..183730 | + | 591 | WP_000705601.1 | type III secretion system effector protein kinase OspG | - |
| B7485_RS25340 (B7485_26655) | 184087..184353 | + | 267 | Protein_223 | IS66 family insertion sequence element accessory protein TnpB | - |
| B7485_RS24625 (B7485_26660) | 184416..185684 | + | 1269 | Protein_224 | IS4-like element IS4 family transposase | - |
| B7485_RS24630 (B7485_26665) | 185741..186951 | + | 1211 | Protein_225 | IS3 family transposase | - |
| B7485_RS25900 | 186992..187072 | + | 81 | Protein_226 | hypothetical protein | - |
| B7485_RS25345 (B7485_26670) | 187086..187277 | - | 192 | Protein_227 | IS66 family insertion sequence element accessory protein TnpB | - |
| B7485_RS24640 (B7485_26675) | 187275..187599 | + | 325 | Protein_228 | IS3 family transposase | - |
| B7485_RS24645 (B7485_26680) | 187629..190541 | - | 2913 | WP_167697595.1 | ankyrin repeat domain-containing protein | - |
| B7485_RS24655 (B7485_26690) | 191024..191866 | + | 843 | WP_075332618.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|