MGE detailed information
MGE type: Conjugative plasmid MGE length: 149680 bp
Accession: NZ_CP030770 Location: 1..149680 Organism: Escherichia coli strain 2017C-4173W12 Replicon: plasmid p2017C-4173W12
Accession: NZ_CP030770 Location: 1..149680 Organism: Escherichia coli strain 2017C-4173W12 Replicon: plasmid p2017C-4173W12
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB71_RS27985 () | 772..1476 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS27995 () | 1646..1927 | - | 282 | Protein_2 | transposase zinc-binding domain-containing protein | - |
| DSB71_RS28000 () | 2074..2934 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| DSB71_RS28005 () | 3117..3350 | - | 234 | Protein_4 | helix-turn-helix domain-containing protein | - |
| DSB71_RS28010 () | 3415..4119 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS28020 () | 4266..4934 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| DSB71_RS28030 () | 5009..6259 | + | 1251 | Protein_7 | DDE-type integrase/transposase/recombinase | - |
| DSB71_RS28035 () | 6324..7028 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS28040 () | 7089..7925 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| DSB71_RS28045 () | 7925..8728 | - | 804 | WP_113621824.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DSB71_RS28050 () | 8789..9604 | - | 816 | WP_113621825.1 | Dihydropteroate synthase | ARG |
| DSB71_RS28060 () | 9912..10763 | - | 852 | WP_000240536.1 | replication protein | - |
| DSB71_RS28065 () | 10750..11469 | - | 720 | Protein_13 | AAA family ATPase | - |
| DSB71_RS28075 () | 11519..12223 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS28080 () | 12260..12472 | - | 213 | WP_113621826.1 | broad-spectrum mercury transporter MerE | - |
| DSB71_RS28085 () | 12469..12831 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| DSB71_RS28090 () | 12849..14543 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| DSB71_RS28095 () | 14595..15017 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| DSB71_RS28100 () | 15053..15328 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| DSB71_RS28105 () | 15342..15692 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| DSB71_RS28110 () | 15764..16198 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| DSB71_RS28115 () | 16305..17002 | - | 698 | Protein_22 | IS1 family transposase IS1R | Transposase |
| DSB71_RS28130 () | 17251..17652 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| DSB71_RS29315 () | 17585..17842 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| DSB71_RS28135 () | 17935..18588 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| DSB71_RS29445 () | 18686..18826 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| DSB71_RS28145 () | 19526..20383 | - | 858 | WP_000131001.1 | incFII family plasmid replication initiator RepA | - |
| DSB71_RS28150 () | 20376..20450 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| DSB71_RS28160 () | 20683..20943 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| DSB71_RS28165 () | 21183..21773 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| DSB71_RS28170 () | 21811..22020 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| DSB71_RS28175 () | 22066..22527 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| DSB71_RS28180 () | 22772..22984 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| DSB71_RS28185 () | 23113..23673 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| DSB71_RS28190 () | 23776..24636 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| DSB71_RS28195 () | 24695..25441 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| DSB71_RS28200 () | 25461..30731 | - | 5271 | WP_000948348.1 | Multifunctional conjugation protein TraI | Relaxase |
| DSB71_RS28205 () | 30731..33037 | - | 2307 | WP_021532614.1 | Coupling protein TraD | VF |
| DSB71_RS28210 () | 33088..33825 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| DSB71_RS28215 () | 34028..34759 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| DSB71_RS28220 () | 34808..35293 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| DSB71_RS28225 () | 35309..38131 | - | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DSB71_RS28230 () | 38128..39501 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| DSB71_RS28235 () | 39488..39913 | - | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| DSB71_RS28240 () | 39861..40208 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| DSB71_RS28245 () | 40138..40683 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DSB71_RS28250 () | 40670..40954 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DSB71_RS28255 () | 41035..41370 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| DSB71_RS28260 () | 41351..41692 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| DSB71_RS28265 () | 41706..42449 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DSB71_RS28270 () | 42442..42699 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| DSB71_RS28275 () | 42726..44576 | - | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DSB71_RS28280 () | 44573..45211 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DSB71_RS28285 () | 45220..45525 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| DSB71_RS28290 () | 45555..46547 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| DSB71_RS28295 () | 46544..47176 | - | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| DSB71_RS28300 () | 47173..47559 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| DSB71_RS28305 () | 47556..50186 | - | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| DSB71_RS28315 () | 50553..50771 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| DSB71_RS28320 () | 50851..51324 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| DSB71_RS28325 () | 51317..51538 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| DSB71_RS28330 () | 51673..52188 | - | 516 | WP_000809888.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DSB71_RS28335 () | 52185..52418 | - | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| DSB71_RS28340 () | 52430..52783 | - | 354 | WP_012602151.1 | DUF2689 domain-containing protein | - |
| DSB71_RS28345 () | 52737..53327 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| DSB71_RS28350 () | 53317..54744 | - | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| DSB71_RS28355 () | 54744..55448 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| DSB71_RS28360 () | 55459..56025 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| DSB71_RS28365 () | 56047..56358 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| DSB71_RS28370 () | 56373..56732 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| DSB71_RS28375 () | 56766..56993 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| DSB71_RS28380 () | 57087..57773 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| DSB71_RS28385 () | 57967..58350 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| DSB71_RS28390 () | 58681..59283 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| DSB71_RS28395 () | 59579..60400 | - | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| DSB71_RS28400 () | 60519..60806 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| DSB71_RS28405 () | 61057..62061 | + | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| DSB71_RS28425 () | 63100..63258 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 63323..63522 | - | 200 | NuclAT_0 | - | - |
| - () | 63323..63522 | - | 200 | NuclAT_0 | - | - |
| - () | 63323..63522 | - | 200 | NuclAT_0 | - | - |
| - () | 63323..63522 | - | 200 | NuclAT_0 | - | - |
| DSB71_RS28430 () | 63534..64253 | - | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| DSB71_RS28435 () | 64250..64684 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| DSB71_RS28440 () | 64739..66697 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| DSB71_RS28445 () | 66756..66989 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| DSB71_RS28450 () | 67046..67573 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| DSB71_RS28455 () | 67825..68829 | + | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| DSB71_RS28465 () | 69253..69705 | + | 453 | WP_024185774.1 | hypothetical protein | - |
| DSB71_RS28475 () | 69791..70354 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| DSB71_RS28480 () | 70401..71762 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| DSB71_RS28485 () | 71814..72044 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| DSB71_RS29540 () | 72557..73037 | + | 481 | Protein_89 | hypothetical protein | - |
| DSB71_RS29450 () | 73007..73198 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| DSB71_RS28505 () | 73195..73617 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| DSB71_RS28510 () | 73664..73966 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| DSB71_RS29545 () | 74505..75275 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| DSB71_RS28520 () | 75320..75754 | - | 435 | WP_000274508.1 | DUF1380 family protein | - |
| DSB71_RS28525 () | 75768..75989 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| DSB71_RS28530 () | 75990..76673 | - | 684 | WP_000086169.1 | DNA methylase | - |
| DSB71_RS28535 () | 76749..77060 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| DSB71_RS28540 () | 77057..77959 | - | 903 | WP_001310012.1 | DUF1281 domain-containing protein | - |
| DSB71_RS28550 () | 78378..79598 | - | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| DSB71_RS28555 () | 79617..80135 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| DSB71_RS28565 () | 80270..80518 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| DSB71_RS28570 () | 80515..80952 | + | 438 | WP_113621827.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DSB71_RS28575 () | 80952..81973 | + | 1022 | Protein_103 | translesion error-prone DNA polymerase V subunit UmuC | - |
| DSB71_RS28580 () | 82075..83247 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| DSB71_RS28585 () | 83247..84044 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| DSB71_RS28590 () | 84106..84357 | + | 252 | Protein_106 | DUF4113 domain-containing protein | - |
| DSB71_RS28595 () | 84362..84754 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| DSB71_RS28600 () | 84759..85730 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| DSB71_RS28605 () | 85959..86603 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| DSB71_RS28610 () | 86597..86872 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| DSB71_RS28615 () | 87010..87819 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| DSB71_RS28620 () | 87820..88125 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DSB71_RS28625 () | 88127..88345 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DSB71_RS28635 () | 90667..91308 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| DSB71_RS28650 () | 92483..93460 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| DSB71_RS28655 () | 93703..94443 | - | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| DSB71_RS28660 () | 94564..94752 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| DSB71_RS28665 () | 95119..96288 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| DSB71_RS28670 () | 96514..96689 | - | 176 | Protein_119 | IS3 family transposase | - |
| DSB71_RS28675 () | 97135..97407 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| DSB71_RS28680 () | 97932..98368 | - | 437 | Protein_121 | IS3 family transposase IS2 | Transposase |
| DSB71_RS28685 () | 98650..100620 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| DSB71_RS28690 () | 100627..101418 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| DSB71_RS28695 () | 101481..102089 | - | 609 | Protein_124 | IS66 family transposase ISEc22 | Transposase |
| DSB71_RS28700 () | 102157..102939 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| DSB71_RS28705 () | 102936..103958 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| DSB71_RS28710 () | 104044..104989 | - | 946 | Protein_127 | IS66 family transposase ISEc8 | Transposase |
| DSB71_RS28715 () | 105038..105385 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| DSB71_RS28720 () | 105382..105786 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| DSB71_RS28725 () | 105815..106198 | - | 384 | Protein_130 | IS3 family transposase IS629 | Transposase |
| DSB71_RS28730 () | 106288..107796 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| DSB71_RS28740 () | 108469..109208 | - | 740 | Protein_132 | IS3 family transposase IS629 | Transposase |
| DSB71_RS28745 () | 109234..109539 | + | 306 | Protein_133 | IS91 family transposase ISSbo1 | Transposase |
| DSB71_RS28755 () | 110062..111237 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| DSB71_RS28760 () | 111306..113567 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| DSB71_RS28765 () | 113736..114512 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| DSB71_RS28770 () | 114520..115395 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| DSB71_RS28775 () | 115727..116413 | - | 687 | Protein_138 | primase alpha helix C-terminal domain-containing protein | - |
| DSB71_RS28795 () | 117865..118200 | - | 336 | WP_001080732.1 | colicin transporter | - |
| DSB71_RS28805 () | 118329..118676 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| DSB71_RS28810 () | 118696..119205 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| DSB71_RS28815 () | 119202..119462 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| DSB71_RS28820 () | 119564..120303 | + | 740 | Protein_143 | IS3 family transposase IS629 | Transposase |
| DSB71_RS29550 () | 120976..121290 | + | 315 | Protein_144 | IS5 family transposase ISKpn26 | Transposase |
| DSB71_RS29555 () | 121291..121464 | + | 174 | Protein_145 | IS5 family transposase ISKpn26 | Transposase |
| DSB71_RS28835 () | 121614..122247 | - | 634 | Protein_146 | histidine-type phosphatase | - |
| DSB71_RS28840 () | 122369..122854 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| DSB71_RS28845 () | 122879..123364 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| DSB71_RS28850 () | 123351..124046 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DSB71_RS28855 () | 124051..125181 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| DSB71_RS28860 () | 125171..126454 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| DSB71_RS28865 () | 126457..127836 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| DSB71_RS28870 () | 127940..128467 | - | 528 | WP_000178050.1 | iron transporter | - |
| DSB71_RS28875 () | 128508..130394 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| DSB71_RS28885 () | 130741..131556 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| DSB71_RS28890 () | 131739..132245 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| DSB71_RS28895 () | 132235..132393 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| DSB71_RS29560 () | 132543..132656 | - | 114 | Protein_158 | IS6 family transposase IS15DI | Transposase |
| DSB71_RS29465 () | 132856..133128 | + | 273 | Protein_159 | IS1 family transposase | - |
| DSB71_RS29470 () | 133205..133468 | - | 264 | Protein_160 | IS6 family transposase IS6100 | Transposase |
| DSB71_RS28920 () | 133533..134237 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS29475 () | 134291..134359 | - | 69 | Protein_162 | PadR family transcriptional regulator | - |
| DSB71_RS28925 () | 134370..135575 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| DSB71_RS28930 () | 135731..135934 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| DSB71_RS28940 () | 136062..136901 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| DSB71_RS28945 () | 136895..137242 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| DSB71_RS28950 () | 137448..138236 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DSB71_RS28955 () | 138367..138840 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| DSB71_RS28960 () | 138998..140011 | + | 1014 | WP_000845046.1 | IS91 family transposase ISAzo26 | Transposase |
| DSB71_RS29340 () | 140214..140564 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| DSB71_RS29345 () | 140690..140837 | + | 148 | Protein_171 | recombinase family protein | - |
| DSB71_RS28975 () | 140831..141535 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS28980 () | 141560..142078 | + | 519 | WP_113621828.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| DSB71_RS28985 () | 142081..145047 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| DSB71_RS28990 () | 145114..145491 | + | 378 | WP_000656305.1 | GNAT family N-acetyltransferase | - |
| DSB71_RS28995 () | 145618..146028 | - | 411 | Protein_176 | IS1 family transposase IS1R | Transposase |
| DSB71_RS29000 () | 146081..146785 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DSB71_RS29005 () | 146850..147113 | + | 264 | Protein_178 | IS6 family transposase IS6100 | Transposase |
| DSB71_RS29020 () | 147606..148190 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| DSB71_RS29025 () | 148190..149428 | - | 1239 | WP_000004159.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|