MGE detailed information
MGE type: Prophage MGE length: 40610 bp
Accession: NZ_CP030768 Location: 4846415..4887024 Organism: Escherichia coli strain 2017C-4173W12 Replicon: chromosome
Accession: NZ_CP030768 Location: 4846415..4887024 Organism: Escherichia coli strain 2017C-4173W12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB71_RS25340 () | 4842271..4843071 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| DSB71_RS25345 () | 4843084..4843935 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| DSB71_RS25350 () | 4843990..4844448 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| DSB71_RS25360 () | 4844877..4845443 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| DSB71_RS25365 () | 4845440..4846249 | - | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| DSB71_RS25370 () | 4846415..4846624 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| DSB71_RS25375 () | 4846637..4846780 | - | 144 | WP_001295496.1 | YobF family protein | - |
| DSB71_RS25385 () | 4847450..4847737 | - | 288 | WP_001006866.1 | YebO family protein | - |
| DSB71_RS25390 () | 4847812..4847955 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| DSB71_RS25395 () | 4848114..4848352 | + | 239 | Protein_4624 | hypothetical protein | - |
| DSB71_RS25400 () | 4848496..4849287 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| DSB71_RS25405 () | 4849464..4850837 | + | 1374 | WP_113621771.1 | MFS transporter | - |
| DSB71_RS25410 () | 4850946..4851404 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| DSB71_RS25420 () | 4851595..4852476 | - | 882 | WP_000984517.1 | protease HtpX | - |
| DSB71_RS25425 () | 4852668..4854716 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| DSB71_RS25430 () | 4854736..4855434 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| DSB71_RS25435 () | 4855531..4856028 | - | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| DSB71_RS25440 () | 4856158..4857441 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| DSB71_RS25445 () | 4857410..4860043 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| DSB71_RS25450 () | 4860123..4861562 | + | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| DSB71_RS25455 () | 4861680..4861916 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| DSB71_RS25460 () | 4862021..4862212 | + | 192 | WP_001296140.1 | YebW family protein | - |
| DSB71_RS25465 () | 4862213..4862869 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - () | 4862966..4863237 | + | 272 | - | - | Antitoxin Detail |
| - () | 4863004..4863107 | - | 104 | - | - | Toxin Detail |
| DSB71_RS25470 () | 4863265..4863606 | - | 342 | WP_000976481.1 | YebY family protein | - |
| DSB71_RS25475 () | 4863619..4864491 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| DSB71_RS25480 () | 4864495..4864869 | - | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| DSB71_RS25485 () | 4865008..4865238 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| DSB71_RS25490 () | 4865340..4865996 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| DSB71_RS25495 () | 4866020..4866682 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| DSB71_RS25500 () | 4866679..4868739 | - | 2061 | WP_000936971.1 | oligopeptidase B | - |
| DSB71_RS25510 () | 4868896..4869321 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| DSB71_RS25515 () | 4869378..4870547 | + | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| DSB71_RS25520 () | 4870711..4871370 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| DSB71_RS25525 () | 4871697..4872053 | - | 357 | WP_001295500.1 | protein YebF | - |
| DSB71_RS25530 () | 4872120..4872410 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| DSB71_RS25535 () | 4872544..4873722 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| DSB71_RS25540 () | 4873777..4874418 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| DSB71_RS25545 () | 4874455..4876266 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| DSB71_RS25550 () | 4876501..4877976 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| DSB71_RS25555 () | 4878314..4879183 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| DSB71_RS25560 () | 4879311..4880753 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| DSB71_RS25565 () | 4880885..4881856 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DSB71_RS25570 () | 4881976..4883298 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| DSB71_RS25575 () | 4883314..4884246 | - | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| DSB71_RS25580 () | 4884325..4885080 | + | 756 | WP_000202988.1 | Zinc import ATP-binding protein ZnuC | VF |
| DSB71_RS25585 () | 4885077..4885862 | + | 786 | WP_000571478.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| DSB71_RS25590 () | 4886014..4887024 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DSB71_RS25595 () | 4887033..4887644 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| DSB71_RS25600 () | 4887783..4887848 | - | 66 | WP_072123646.1 | stress response small protein YobI | - |
| DSB71_RS25605 () | 4887919..4888521 | + | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| DSB71_RS25610 () | 4888523..4889044 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| DSB71_RS25615 () | 4889079..4889819 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DSB71_RS25620 () | 4889848..4890300 | - | 453 | WP_076611058.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|