MGE detailed information
MGE type: Mobilizable plasmid MGE length: 59808 bp
Accession: NZ_CP030766 Location: 1..59808 Organism: Escherichia coli strain 2017C-4109 Replicon: plasmid pMCR-1
Accession: NZ_CP030766 Location: 1..59808 Organism: Escherichia coli strain 2017C-4109 Replicon: plasmid pMCR-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB73_RS00580 () | 3916..4257 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| DSB73_RS00585 () | 4625..5026 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| DSB73_RS00590 () | 5044..5796 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| DSB73_RS00595 () | 5798..6505 | + | 708 | WP_000108794.1 | hypothetical protein | - |
| DSB73_RS00600 () | 6525..6965 | + | 441 | WP_104652140.1 | hypothetical protein | - |
| DSB73_RS00605 () | 6967..7293 | + | 327 | WP_032345720.1 | hypothetical protein | - |
| DSB73_RS00610 () | 7424..7861 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DSB73_RS00615 () | 7886..8068 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| DSB73_RS00620 () | 8626..8808 | + | 183 | WP_024135751.1 | hypothetical protein | - |
| DSB73_RS00625 () | 9225..9518 | - | 294 | WP_000673428.1 | hypothetical protein | - |
| DSB73_RS00635 () | 10089..10331 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| DSB73_RS00640 () | 10328..10582 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| DSB73_RS00645 () | 10579..11121 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| DSB73_RS00650 () | 11225..11740 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| DSB73_RS00655 () | 12144..12473 | - | 330 | WP_000855119.1 | hypothetical protein | - |
| DSB73_RS00665 () | 13061..13726 | + | 666 | WP_000532148.1 | P-loop NTPase | - |
| DSB73_RS29110 () | 13800..14084 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| DSB73_RS00675 () | 14102..14698 | - | 597 | WP_000125165.1 | hypothetical protein | - |
| DSB73_RS00680 () | 14848..15009 | - | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
| DSB73_RS00700 () | 16608..17636 | - | 1029 | WP_001175213.1 | replication initiation protein | - |
| DSB73_RS00705 () | 18722..19228 | + | 507 | WP_039022938.1 | CaiF/GrlA family transcriptional regulator | - |
| DSB73_RS00710 () | 19221..19436 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| DSB73_RS28650 () | 19429..19605 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| DSB73_RS00715 () | 19632..20585 | + | 954 | WP_072097371.1 | SPFH/Band 7/PHB domain protein | - |
| DSB73_RS00725 () | 20971..21414 | + | 444 | WP_000964333.1 | NfeD family protein | - |
| DSB73_RS28655 () | 21418..21588 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| DSB73_RS00730 () | 21599..22252 | + | 654 | WP_053899054.1 | hypothetical protein | - |
| DSB73_RS00740 () | 22524..22739 | + | 216 | WP_072185022.1 | hypothetical protein | - |
| DSB73_RS00745 () | 22755..23057 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| DSB73_RS00750 () | 23054..23311 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| DSB73_RS00755 () | 23315..24301 | + | 987 | WP_053899058.1 | type IV secretion system protein | - |
| DSB73_RS00760 () | 24307..24954 | + | 648 | WP_022645138.1 | hypothetical protein | VF |
| DSB73_RS00765 () | 24958..25194 | + | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| DSB73_RS00770 () | 25231..26063 | - | 833 | Protein_34 | DNA primase | - |
| DSB73_RS00775 () | 26111..26410 | + | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| DSB73_RS00780 () | 26413..27648 | + | 1236 | WP_053899060.1 | hypothetical protein | VF |
| DSB73_RS00785 () | 27654..28091 | + | 438 | WP_053899063.1 | type IV pilus biogenesis protein PilM | - |
| DSB73_RS00790 () | 28210..28608 | + | 399 | WP_053899065.1 | hypothetical protein | - |
| DSB73_RS00795 () | 28629..29213 | + | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| DSB73_RS00800 () | 29315..29503 | + | 189 | WP_050567133.1 | hypothetical protein | - |
| DSB73_RS00805 () | 29574..29894 | + | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| DSB73_RS00810 () | 29900..32257 | + | 2358 | WP_104652138.1 | VirB4 family type IV secretion system protein | - |
| DSB73_RS00820 () | 32423..33157 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| DSB73_RS00825 () | 33223..33924 | + | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| DSB73_RS00830 () | 33914..35053 | + | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| DSB73_RS00835 () | 35096..36151 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| DSB73_RS00840 () | 36167..38125 | + | 1959 | WP_120795305.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DSB73_RS00845 () | 38176..39819 | + | 1644 | WP_001035589.1 | Outer membrane lipoprotein BfpB | VF |
| DSB73_RS00850 () | 39858..41180 | + | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| DSB73_RS00855 () | 41164..41658 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| DSB73_RS00860 () | 41683..43221 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| DSB73_RS00865 () | 43212..44321 | + | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DSB73_RS00870 () | 44366..44923 | + | 558 | WP_000095048.1 | hypothetical protein | - |
| DSB73_RS00875 () | 44989..45471 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| DSB73_RS00880 () | 45475..46110 | + | 636 | WP_120795306.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| DSB73_RS00885 () | 46123..47166 | + | 1044 | Protein_56 | hypothetical protein | VF |
| DSB73_RS00900 () | 48666..49790 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| DSB73_RS00905 () | 49802..50455 | + | 654 | WP_192892882.1 | hypothetical protein | - |
| DSB73_RS00910 () | 50502..51017 | + | 516 | WP_000698398.1 | thermonuclease family protein | - |
| DSB73_RS00915 () | 51112..52788 | + | 1677 | WP_120795308.1 | PcfJ domain-containing protein | - |
| DSB73_RS00920 () | 52958..53533 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| DSB73_RS00925 () | 53538..55703 | + | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| DSB73_RS00930 () | 55772..55978 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| DSB73_RS28660 () | 56324..56764 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| DSB73_RS00940 () | 56723..57496 | - | 774 | WP_052234578.1 | PAP2 family protein | - |
| DSB73_RS00945 () | 57568..59193 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|