MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34927 bp
Accession: NZ_CP030340 Location: 1..34927 Organism: Escherichia coli strain AR_451 Replicon: plasmid unnamed2
Accession: NZ_CP030340 Location: 1..34927 Organism: Escherichia coli strain AR_451 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC38_RS26870 () | 1..1244 | - | 1244 | WP_112032782.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| CSC38_RS26875 () | 1347..1982 | - | 636 | WP_000999379.1 | CPBP family intramembrane metalloprotease | - |
| CSC38_RS26885 () | 2767..5058 | - | 2292 | WP_001289267.1 | hypothetical protein | - |
| CSC38_RS26890 () | 5051..6121 | - | 1071 | WP_015059313.1 | IncI1-type conjugal transfer protein TrbB | - |
| CSC38_RS26895 () | 6140..7348 | - | 1209 | WP_024171190.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 7528..7590 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 7528..7590 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 7528..7590 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 7528..7590 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| CSC38_RS26900 () | 7640..7792 | + | 153 | WP_024179514.1 | Hok/Gef family protein | Toxin Detail |
| CSC38_RS26905 () | 7864..8115 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - () | 8509..8560 | - | 52 | NuclAT_1 | - | - |
| - () | 8509..8560 | - | 52 | NuclAT_1 | - | - |
| - () | 8509..8560 | - | 52 | NuclAT_1 | - | - |
| - () | 8509..8560 | - | 52 | NuclAT_1 | - | - |
| CSC38_RS27445 () | 9400..9576 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| CSC38_RS26915 () | 9785..9994 | - | 210 | WP_015059315.1 | hemolysin expression modulator Hha | - |
| CSC38_RS26920 () | 10092..10706 | - | 615 | WP_015059316.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CSC38_RS26925 () | 10782..12950 | - | 2169 | WP_000698355.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| CSC38_RS26930 () | 13047..13631 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| CSC38_RS26935 () | 13660..14862 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| CSC38_RS26940 () | 14829..15443 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| CSC38_RS26945 () | 15443..18487 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| CSC38_RS26950 () | 18577..19377 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CSC38_RS26955 () | 19361..19549 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CSC38_RS26960 () | 19613..20017 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| CSC38_RS26965 () | 20068..20595 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CSC38_RS26970 () | 20595..21299 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| CSC38_RS26975 () | 21299..22588 | - | 1290 | WP_015059318.1 | conjugal transfer protein TraO | - |
| CSC38_RS26980 () | 22591..23574 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| CSC38_RS26985 () | 23585..24277 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CSC38_RS26990 () | 24274..24621 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CSC38_RS26995 () | 24639..28406 | - | 3768 | WP_001141537.1 | DNA primase | - |
| CSC38_RS27000 () | 28496..29047 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| CSC38_RS27005 () | 29062..29352 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CSC38_RS27010 () | 29349..30497 | - | 1149 | WP_001024975.1 | putative protein YggR | VF |
| CSC38_RS27015 () | 30494..31312 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| CSC38_RS27020 () | 31309..31767 | - | 459 | WP_001079805.1 | hypothetical protein | VF |
| CSC38_RS27025 () | 32162..32746 | - | 585 | WP_000977523.1 | histidine phosphatase family protein | - |
| CSC38_RS27030 () | 32806..34008 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CSC38_RS27035 () | 34093..34917 | - | 825 | WP_001238935.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|