MGE detailed information
MGE type: Mobilizable plasmid MGE length: 35509 bp
Accession: NZ_CP030339 Location: 1..35509 Organism: Escherichia coli strain AR_451 Replicon: plasmid unnamed3
Accession: NZ_CP030339 Location: 1..35509 Organism: Escherichia coli strain AR_451 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC38_RS27245 () | 1..128 | - | 128 | Protein_0 | conjugal transfer protein TrbJ | - |
| CSC38_RS26605 () | 118..663 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CSC38_RS26610 () | 650..934 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CSC38_RS26615 () | 1061..1381 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| CSC38_RS26620 () | 1429..2126 | - | 698 | Protein_4 | IS1 family transposase | - |
| CSC38_RS26630 () | 2200..2511 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| CSC38_RS26635 () | 2516..2878 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| CSC38_RS26640 () | 2912..3139 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| CSC38_RS26645 () | 3227..3904 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| CSC38_RS26650 () | 4038..4421 | - | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| CSC38_RS26655 () | 4752..5354 | + | 603 | WP_000243712.1 | transglycosylase SLT domain-containing protein | - |
| CSC38_RS26660 () | 5651..6472 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| CSC38_RS26665 () | 6591..6878 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| CSC38_RS27425 () | 6903..7109 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| CSC38_RS27430 () | 7022..7357 | - | 336 | WP_013023876.1 | hypothetical protein | - |
| CSC38_RS26685 () | 7800..7958 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 8002..8042 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 8002..8042 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 8002..8042 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 8002..8042 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 9486..9672 | - | 187 | NuclAT_0 | - | - |
| - () | 9486..9672 | - | 187 | NuclAT_0 | - | - |
| - () | 9486..9672 | - | 187 | NuclAT_0 | - | - |
| - () | 9486..9672 | - | 187 | NuclAT_0 | - | - |
| CSC38_RS26695 () | 9684..10403 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| CSC38_RS26700 () | 10400..10834 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| CSC38_RS26705 () | 10889..12846 | - | 1958 | Protein_19 | ParB/RepB/Spo0J family partition protein | - |
| CSC38_RS26710 () | 12912..13145 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| CSC38_RS26715 () | 13207..13746 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| CSC38_RS27435 () | 13891..14226 | - | 336 | WP_013023883.1 | hypothetical protein | - |
| CSC38_RS27250 () | 14389..14631 | - | 243 | WP_001617878.1 | hypothetical protein | - |
| CSC38_RS26740 () | 14657..15220 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| CSC38_RS26745 () | 15268..16629 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| CSC38_RS26750 () | 16681..16911 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CSC38_RS27440 () | 17425..17975 | + | 551 | Protein_27 | hypothetical protein | - |
| CSC38_RS26760 () | 17945..18135 | - | 191 | Protein_28 | hypothetical protein | - |
| CSC38_RS26765 () | 18132..18554 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| CSC38_RS26770 () | 18601..18903 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| CSC38_RS27255 () | 19443..20219 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| CSC38_RS26785 () | 20270..20704 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| CSC38_RS26790 () | 20718..20939 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| CSC38_RS26795 () | 20940..21623 | - | 684 | WP_000086185.1 | DNA methylase | - |
| CSC38_RS26800 () | 21700..22004 | - | 305 | Protein_35 | hypothetical protein | - |
| CSC38_RS26805 () | 22008..22910 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| CSC38_RS26815 () | 23648..24619 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CSC38_RS26820 () | 24619..25785 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| CSC38_RS26825 () | 26373..27128 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| CSC38_RS26830 () | 27902..28708 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| CSC38_RS26835 () | 28709..29014 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CSC38_RS26840 () | 29016..29234 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CSC38_RS26845 () | 29942..30937 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| CSC38_RS26850 () | 30941..31873 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| CSC38_RS26855 () | 32010..32707 | - | 698 | Protein_45 | IS1 family transposase | - |
| CSC38_RS26865 () | 32921..35509 | - | 2589 | WP_112032781.1 | HsdR family type I site-specific deoxyribonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|