MGE detailed information
MGE type: Genomic_island MGE length: 66321 bp
Accession: NZ_CP030337 Location: 2928535..2994855 Organism: Escherichia coli strain AR_451 Replicon: chromosome
Accession: NZ_CP030337 Location: 2928535..2994855 Organism: Escherichia coli strain AR_451 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC38_RS27360 () | 2924208..2924351 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| CSC38_RS15945 () | 2924601..2928488 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| CSC38_RS15950 () | 2928760..2929020 | + | 261 | Protein_2805 | IS3 family transposase ISSfl10 | Transposase |
| CSC38_RS15955 () | 2929085..2930236 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| CSC38_RS15960 () | 2930249..2931139 | + | 891 | Protein_2807 | IS3 family transposase ISSd1 | Transposase |
| CSC38_RS15965 () | 2931184..2931606 | + | 423 | Protein_2808 | hypothetical protein | - |
| CSC38_RS15975 () | 2932022..2933056 | + | 1035 | Protein_2809 | IS3 family transposase ISKpn38 | Transposase |
| CSC38_RS15980 () | 2933155..2933580 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CSC38_RS15985 () | 2933577..2933927 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| CSC38_RS15990 () | 2933958..2935570 | + | 1613 | Protein_2812 | IS66 family transposase ISEc23 | Transposase |
| CSC38_RS15995 () | 2935602..2936093 | + | 492 | Protein_2813 | IS3 family transposase | - |
| CSC38_RS16000 () | 2936127..2936636 | - | 510 | Protein_2814 | L-lactate permease | - |
| CSC38_RS16005 () | 2936656..2936978 | + | 323 | Protein_2815 | transposase | - |
| CSC38_RS16015 () | 2937556..2937771 | - | 216 | WP_000266542.1 | hypothetical protein | - |
| CSC38_RS16020 () | 2937775..2938134 | - | 360 | WP_001296382.1 | hypothetical protein | - |
| CSC38_RS16030 () | 2938425..2938667 | - | 243 | WP_001296383.1 | hypothetical protein | - |
| CSC38_RS16035 () | 2939152..2939311 | + | 160 | Protein_2819 | transposase domain-containing protein | - |
| CSC38_RS16040 () | 2939529..2941619 | - | 2091 | WP_001223344.1 | bifunctional siderophore receptor/adhesin Iha | - |
| CSC38_RS16060 () | 2943499..2944485 | - | 987 | WP_000274668.1 | hypothetical protein | - |
| CSC38_RS16065 () | 2944585..2945319 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| CSC38_RS16070 () | 2945355..2946290 | - | 936 | WP_001305022.1 | alpha/beta hydrolase | - |
| CSC38_RS16075 () | 2946340..2947449 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| CSC38_RS16080 () | 2947462..2948172 | - | 711 | WP_001296386.1 | N-acetylneuraminic acid channel protein | - |
| CSC38_RS16085 () | 2948218..2949048 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| CSC38_RS16090 () | 2949052..2950524 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| CSC38_RS16095 () | 2950573..2951448 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| CSC38_RS16100 () | 2951482..2952399 | - | 918 | WP_001149834.1 | N-acetylneuraminate lyase | - |
| CSC38_RS16105 () | 2952551..2952688 | + | 138 | WP_085949591.1 | transposase domain-containing protein | - |
| CSC38_RS16115 () | 2953060..2953485 | + | 426 | WP_000435655.1 | IS66 family transposase IS682 | Transposase |
| CSC38_RS16120 () | 2953482..2953832 | + | 351 | WP_000624646.1 | IS66 family transposase IS682 | Transposase |
| CSC38_RS16125 () | 2953863..2954960 | + | 1098 | Protein_2834 | IS66 family transposase IS682 | Transposase |
| CSC38_RS16130 () | 2954960..2956498 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| CSC38_RS16135 () | 2956537..2956722 | - | 186 | Protein_2836 | zinc-ribbon domain-containing protein | - |
| CSC38_RS16140 () | 2956719..2957102 | - | 384 | WP_000271011.1 | hypothetical protein | - |
| CSC38_RS16145 () | 2957269..2957838 | - | 570 | WP_000221563.1 | inovirus Gp2 family protein | - |
| CSC38_RS16150 () | 2958037..2958234 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| CSC38_RS16160 () | 2958567..2958716 | - | 150 | WP_071528377.1 | hemolysin activation protein | - |
| CSC38_RS16170 () | 2959664..2959870 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| CSC38_RS16175 () | 2959956..2960528 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| CSC38_RS16180 () | 2960649..2962139 | - | 1491 | WP_001305029.1 | DUF3987 domain-containing protein | - |
| CSC38_RS16195 () | 2963471..2964343 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| CSC38_RS16200 () | 2964677..2967799 | + | 3123 | WP_000820373.1 | autotransporter adhesin Ag43 | - |
| CSC38_RS16205 () | 2967894..2969021 | + | 1128 | Protein_2846 | hypothetical protein | - |
| CSC38_RS16210 () | 2969097..2969552 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| CSC38_RS16215 () | 2969631..2969864 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| CSC38_RS16225 () | 2969965..2970783 | + | 819 | WP_001234620.1 | DUF945 domain-containing protein | - |
| CSC38_RS16230 () | 2970838..2971323 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| CSC38_RS16235 () | 2971339..2971815 | + | 477 | WP_001186726.1 | RadC family protein | - |
| CSC38_RS16240 () | 2971878..2972099 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| CSC38_RS16245 () | 2972118..2972762 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| CSC38_RS16250 () | 2972812..2973180 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CSC38_RS16255 () | 2973269..2973646 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| CSC38_RS16260 () | 2973643..2974131 | + | 489 | WP_000761699.1 | hypothetical protein | - |
| CSC38_RS16265 () | 2974148..2974345 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| CSC38_RS16270 () | 2974430..2975275 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| CSC38_RS16275 () | 2975344..2975739 | + | 396 | WP_000208384.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| CSC38_RS16280 () | 2975732..2976665 | + | 934 | Protein_2860 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| CSC38_RS27200 () | 2977097..2977252 | + | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| CSC38_RS16290 () | 2978063..2979046 | + | 984 | WP_001296394.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| CSC38_RS16295 () | 2979118..2980266 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| CSC38_RS16300 () | 2980290..2981966 | + | 1677 | WP_001305083.1 | Polysialic acid transport protein KpsD | VF |
| CSC38_RS16305 () | 2981976..2982716 | + | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CSC38_RS16310 () | 2982713..2984740 | + | 2028 | WP_000579513.1 | hypothetical protein | VF |
| CSC38_RS16315 () | 2984775..2985944 | + | 1170 | WP_001161856.1 | hypothetical protein | VF |
| CSC38_RS16320 () | 2986283..2987461 | - | 1179 | WP_001305084.1 | UDP-glucose 6-dehydrogenase | VF |
| CSC38_RS16325 () | 2987503..2989065 | - | 1563 | WP_001305085.1 | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD | VF |
| CSC38_RS16330 () | 2989226..2990260 | + | 1035 | Protein_2870 | IS481 family transposase | - |
| CSC38_RS16335 () | 2990357..2992045 | - | 1689 | WP_022645101.1 | hypothetical protein | VF |
| CSC38_RS16340 () | 2992480..2993196 | - | 717 | WP_000634338.1 | hypothetical protein | - |
| CSC38_RS16345 () | 2993647..2993803 | - | 157 | Protein_2873 | transposase | - |
| CSC38_RS16350 () | 2994181..2994855 | - | 675 | WP_000590243.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| CSC38_RS16355 () | 2994852..2995628 | - | 777 | WP_000124287.1 | ABC transporter permease | - |
| CSC38_RS16365 () | 2996686..2997222 | - | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| CSC38_RS16370 () | 2997224..2998402 | - | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
| CSC38_RS16375 () | 2998399..2999376 | - | 978 | WP_000633242.1 | type II secretion system minor pseudopilin GspK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|