MGE detailed information
MGE type: Genomic_island MGE length: 11456 bp
Accession: NZ_CP030331 Location: 586848..598303 Organism: Escherichia coli strain AR_452 Replicon: chromosome
Accession: NZ_CP030331 Location: 586848..598303 Organism: Escherichia coli strain AR_452 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC39_RS03960 () | 581849..582283 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| CSC39_RS03965 () | 582301..583179 | - | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| CSC39_RS03970 () | 583169..583948 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| CSC39_RS03975 () | 583959..584432 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| CSC39_RS03980 () | 584455..585735 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| CSC39_RS03990 () | 585984..586793 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| CSC39_RS03995 () | 586848..587312 | - | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| CSC39_RS04000 () | 587312..587647 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| CSC39_RS04005 () | 587796..589367 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| CSC39_RS04010 () | 589742..591076 | + | 1335 | WP_000599640.1 | galactarate/glucarate/glycerate transporter GarP | - |
| CSC39_RS04015 () | 591092..591862 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| CSC39_RS04020 () | 591892..592782 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| CSC39_RS04025 () | 592879..594024 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| CSC39_RS04035 () | 594828..596015 | - | 1188 | WP_000484554.1 | YhaC family protein | - |
| CSC39_RS04040 () | 596037..596576 | - | 540 | WP_000675745.1 | hypothetical protein | - |
| CSC39_RS26190 () | 596832..597050 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| CSC39_RS04050 () | 597365..598303 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| CSC39_RS04060 () | 598402..599391 | + | 990 | WP_112021717.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| CSC39_RS04065 () | 599413..600744 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| CSC39_RS04070 () | 600770..601978 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|