MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP030331 Location: 4318664..4328014 Organism: Escherichia coli strain AR_452 Replicon: chromosome
Accession: NZ_CP030331 Location: 4318664..4328014 Organism: Escherichia coli strain AR_452 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC39_RS23200 () | 4313825..4315126 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| CSC39_RS23205 () | 4315242..4315580 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CSC39_RS23210 () | 4315556..4317253 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| CSC39_RS23215 () | 4317290..4317865 | + | 576 | WP_001611149.1 | transcriptional regulator | - |
| CSC39_RS23230 () | 4318664..4320202 | + | 1539 | WP_001187172.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CSC39_RS23235 () | 4320567..4321901 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CSC39_RS23240 () | 4321981..4324128 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CSC39_RS23245 () | 4324187..4325644 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| CSC39_RS23250 () | 4325881..4327398 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| CSC39_RS23255 () | 4327517..4327690 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CSC39_RS23260 () | 4327718..4328014 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CSC39_RS23270 () | 4328241..4328513 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| CSC39_RS23275 () | 4328525..4328755 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| CSC39_RS23280 () | 4328936..4330567 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| CSC39_RS23285 () | 4330564..4331283 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |