MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94810 bp
Accession: NZ_CP030234 Location: 1..94810 Organism: Salmonella enterica strain SA20101045 Replicon: plasmid pSA20101045.1
Accession: NZ_CP030234 Location: 1..94810 Organism: Salmonella enterica strain SA20101045 Replicon: plasmid pSA20101045.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHE40_RS24080 () | 46..1077 | + | 1032 | WP_001690254.1 | replication initiation protein | - |
| CHE40_RS24095 () | 1985..2254 | + | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| CHE40_RS24100 () | 2251..2532 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CHE40_RS24105 () | 2728..3069 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| CHE40_RS24110 () | 3369..3956 | + | 588 | WP_024189984.1 | serine acetyltransferase | - |
| CHE40_RS24115 () | 4238..4831 | - | 594 | WP_000517696.1 | hypothetical protein | - |
| CHE40_RS24125 () | 5185..6531 | + | 1347 | WP_032082920.1 | hypothetical protein | - |
| CHE40_RS24135 () | 6810..8690 | + | 1881 | WP_052979469.1 | colicin | - |
| CHE40_RS24140 () | 8712..9047 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| CHE40_RS24150 () | 9176..9523 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| CHE40_RS24155 () | 9541..10131 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| CHE40_RS24160 () | 10131..10388 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| CHE40_RS24165 () | 10956..11369 | + | 414 | WP_042199921.1 | hypothetical protein | - |
| CHE40_RS24170 () | 11371..12150 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| CHE40_RS24175 () | 12330..12974 | + | 645 | WP_001144036.1 | ParA family protein | - |
| CHE40_RS24180 () | 13061..13369 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| CHE40_RS24185 () | 13783..14763 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| CHE40_RS24190 () | 14756..15172 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| CHE40_RS24195 () | 15174..16448 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| CHE40_RS24200 () | 16448..16885 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CHE40_RS24205 () | 16882..17130 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CHE40_RS24215 () | 17524..18450 | + | 927 | WP_001545746.1 | DUF1281 domain-containing protein | - |
| CHE40_RS24220 () | 18447..18758 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| CHE40_RS24225 () | 18835..19518 | + | 684 | WP_001473164.1 | DNA methylase | - |
| CHE40_RS24230 () | 19519..19740 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| CHE40_RS24235 () | 19754..20188 | + | 435 | WP_000274483.1 | DUF1380 family protein | - |
| CHE40_RS24845 () | 20233..21003 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| CHE40_RS24250 () | 21420..21845 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| CHE40_RS24255 () | 21892..22314 | + | 423 | WP_044706628.1 | DUF1380 family protein | - |
| CHE40_RS24260 () | 22311..22502 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CHE40_RS24270 () | 22573..22887 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| CHE40_RS24280 () | 23271..23798 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| CHE40_RS24285 () | 23856..24089 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| CHE40_RS24290 () | 24148..26097 | + | 1950 | Protein_33 | ParB/RepB/Spo0J family partition protein | - |
| CHE40_RS24295 () | 26152..26586 | + | 435 | WP_114051252.1 | conjugation system SOS inhibitor PsiB | - |
| CHE40_RS24300 () | 26583..26726 | + | 144 | Protein_35 | plasmid SOS inhibition protein A | - |
| CHE40_RS24305 () | 26812..27558 | - | 747 | WP_001016257.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| CHE40_RS24310 () | 27573..27809 | - | 237 | Protein_37 | IS21 family transposase | - |
| CHE40_RS24325 () | 29060..30367 | - | 1308 | Protein_39 | IS21-like element ISEc12 family transposase | - |
| CHE40_RS24330 () | 30563..31141 | + | 579 | Protein_40 | plasmid SOS inhibition protein A | - |
| CHE40_RS24335 () | 31271..32446 | + | 1176 | WP_000942657.1 | transposase | - |
| CHE40_RS24345 () | 32894..33394 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| CHE40_RS24360 () | 34123..34557 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| CHE40_RS24365 () | 34651..34917 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| CHE40_RS24370 () | 34982..35920 | + | 939 | WP_000038336.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| CHE40_RS24375 () | 35920..36165 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| CHE40_RS24380 () | 36196..36447 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CHE40_RS24390 () | 37028..37876 | + | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| CHE40_RS24395 () | 37962..38297 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CHE40_RS24400 () | 38531..38863 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CHE40_RS24405 () | 38874..41573 | + | 2700 | WP_010891268.1 | IncI1-type relaxase NikB | - |
| CHE40_RS24410 () | 41610..43901 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| CHE40_RS24415 () | 43894..44964 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| CHE40_RS24420 () | 44983..46191 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| CHE40_RS24425 () | 46483..46635 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| CHE40_RS24430 () | 46707..46958 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| CHE40_RS24965 () | 47882..48058 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| CHE40_RS24445 () | 48450..48659 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| CHE40_RS24450 () | 48731..49393 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CHE40_RS24455 () | 49464..51632 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| CHE40_RS24460 () | 51729..52313 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| CHE40_RS24465 () | 52342..53544 | - | 1203 | WP_001697941.1 | IncI1-type conjugal transfer protein TraW | - |
| CHE40_RS24470 () | 53511..54125 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| CHE40_RS24475 () | 54125..57169 | - | 3045 | WP_010891269.1 | IncI1-type conjugal transfer protein TraU | - |
| CHE40_RS24480 () | 57259..58059 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| CHE40_RS24485 () | 58043..58231 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| CHE40_RS24490 () | 58295..58699 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| CHE40_RS24495 () | 58750..59277 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CHE40_RS24500 () | 59277..59981 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CHE40_RS24505 () | 59981..61270 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| CHE40_RS24510 () | 61273..62256 | - | 984 | WP_001191879.1 | IncI1-type conjugal transfer protein TraN | - |
| CHE40_RS24515 () | 62267..62959 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CHE40_RS24520 () | 62956..63303 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CHE40_RS24525 () | 63321..67088 | - | 3768 | WP_010891270.1 | DNA primase | - |
| CHE40_RS24530 () | 67178..67729 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| CHE40_RS24535 () | 67744..68034 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| CHE40_RS24540 () | 68031..69179 | - | 1149 | WP_052979471.1 | plasmid transfer ATPase TraJ | - |
| CHE40_RS24545 () | 69176..69994 | - | 819 | WP_000646095.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| CHE40_RS24550 () | 69991..70449 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| CHE40_RS24555 () | 70844..71428 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CHE40_RS24560 () | 71488..72690 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| CHE40_RS24570 () | 72842..73324 | + | 483 | Protein_82 | IS4-like element ISVsa5 family transposase | - |
| CHE40_RS24580 () | 74563..75303 | + | 741 | Protein_84 | IS4-like element ISVsa5 family transposase | - |
| CHE40_RS24585 () | 75367..76191 | - | 825 | WP_114051253.1 | conjugal transfer protein TraE | - |
| CHE40_RS24590 () | 76342..77496 | - | 1155 | WP_001139958.1 | integrase | - |
| CHE40_RS24595 () | 77495..77581 | + | 87 | Protein_87 | shufflon protein D' | - |
| CHE40_RS24605 () | 77630..77848 | + | 219 | WP_071527775.1 | shufflon protein D' | - |
| CHE40_RS24970 () | 78936..79133 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| CHE40_RS24630 () | 79130..80566 | - | 1437 | WP_000527428.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CHE40_RS24635 () | 80554..81210 | - | 657 | WP_001193549.1 | prepilin peptidase | - |
| CHE40_RS24640 () | 81195..81755 | - | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| CHE40_RS24645 () | 81765..82379 | - | 615 | WP_000908226.1 | type IV prepilin | - |
| CHE40_RS24650 () | 82396..83481 | - | 1086 | WP_001208802.1 | type II secretion system F family protein | - |
| CHE40_RS24655 () | 83494..85047 | - | 1554 | WP_000362206.1 | Flp pilus assembly complex ATPase component TadA | - |
| CHE40_RS24660 () | 85058..85510 | - | 453 | WP_001247337.1 | type IV pilus biogenesis protein PilP | - |
| CHE40_RS24665 () | 85497..86792 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| CHE40_RS24670 () | 86785..88467 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| CHE40_RS24675 () | 88481..88918 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| CHE40_RS24680 () | 88918..89985 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| CHE40_RS24695 () | 90957..91331 | - | 375 | WP_001136188.1 | PilI type IV pilus biogenesis protein | - |
| CHE40_RS24700 () | 91503..92186 | - | 684 | WP_052979470.1 | conjugal transfer protein TraC | - |
| CHE40_RS24710 () | 92440..92973 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CHE40_RS24720 () | 93415..93702 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| CHE40_RS24725 () | 93620..93883 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|