MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 141502 bp
Accession: NZ_CP030197 Location: 1..141502 Organism: Salmonella enterica strain SA20051401 Replicon: plasmid pSA20051401.1
Accession: NZ_CP030197 Location: 1..141502 Organism: Salmonella enterica strain SA20051401 Replicon: plasmid pSA20051401.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHD15_RS26880 () | 1..858 | + | 858 | WP_139782334.1 | incFII family plasmid replication initiator RepA | - |
| CHD15_RS25100 () | 2146..2423 | + | 278 | Protein_2 | hypothetical protein | - |
| CHD15_RS25110 () | 2874..3293 | + | 420 | Protein_3 | IS481 family transposase | - |
| CHD15_RS25115 () | 3392..4234 | + | 843 | Protein_4 | IS110 family transposase | - |
| CHD15_RS25120 () | 4460..4576 | - | 117 | Protein_5 | transposase | - |
| CHD15_RS25125 () | 5399..6055 | + | 657 | WP_094965585.1 | hypothetical protein | - |
| CHD15_RS25130 () | 6210..6326 | + | 117 | Protein_7 | transposase | - |
| CHD15_RS25135 () | 6552..7532 | - | 981 | WP_114064465.1 | IS110 family transposase | - |
| CHD15_RS25140 () | 7599..8276 | + | 678 | Protein_9 | IS3 family transposase | - |
| CHD15_RS27070 () | 8333..9048 | - | 716 | Protein_10 | transposase | - |
| CHD15_RS25160 () | 9576..9768 | - | 193 | Protein_11 | transposase | - |
| CHD15_RS25165 () | 9969..10920 | - | 952 | Protein_12 | IS3 family transposase | - |
| CHD15_RS25175 () | 11789..12124 | + | 336 | WP_080171867.1 | adhesin biosynthesis transcription regulatory family protein | - |
| CHD15_RS25180 () | 12121..12654 | + | 534 | WP_114064468.1 | type 1 fimbrial protein | - |
| CHD15_RS25185 () | 12663..15113 | + | 2451 | WP_114064469.1 | F4 (K88) fimbrial usher FaeD | - |
| CHD15_RS25190 () | 15136..15924 | + | 789 | WP_114064523.1 | fimbria/pilus periplasmic chaperone | - |
| CHD15_RS25195 () | 15952..16446 | + | 495 | WP_044128321.1 | DUF5462 family protein | - |
| CHD15_RS25200 () | 16680..17459 | + | 780 | WP_114064470.1 | fimbrial protein | - |
| CHD15_RS25205 () | 17694..18491 | + | 798 | WP_114064471.1 | F4 (K88) fimbria minor subunit FaeH | - |
| CHD15_RS25210 () | 18522..19289 | + | 768 | WP_114064472.1 | fimbrial protein | - |
| CHD15_RS25215 () | 19276..19497 | + | 222 | Protein_21 | hypothetical protein | - |
| CHD15_RS25220 () | 19580..20299 | + | 720 | WP_114064473.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| CHD15_RS25225 () | 20411..20983 | + | 573 | Protein_23 | hypothetical protein | - |
| CHD15_RS26890 () | 21124..21987 | + | 864 | WP_162785944.1 | fimbrial | - |
| CHD15_RS25235 () | 22029..26048 | + | 4020 | WP_114064474.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| CHD15_RS25240 () | 26038..26271 | + | 234 | WP_044127709.1 | hypothetical protein | - |
| CHD15_RS25245 () | 26535..28244 | + | 1710 | WP_058108437.1 | type III secretion system outer membrane ring subunit SctC | - |
| CHD15_RS25250 () | 28234..29364 | + | 1131 | WP_114064475.1 | type III secretion system gatekeeper subunit SctW | - |
| CHD15_RS25255 () | 29358..31424 | + | 2067 | WP_114064476.1 | EscV/YscV/HrcV family type III secretion system export apparatus protein | - |
| CHD15_RS25260 () | 31461..32753 | + | 1293 | WP_044126678.1 | type III secretion system ATPase SctN | - |
| CHD15_RS25265 () | 32737..33204 | + | 468 | WP_044126676.1 | hypothetical protein | - |
| CHD15_RS25270 () | 33173..34000 | + | 828 | WP_114064477.1 | hypothetical protein | - |
| CHD15_RS25275 () | 34000..34899 | + | 900 | WP_114064478.1 | YscQ/HrcQ family type III secretion apparatus protein | - |
| CHD15_RS25280 () | 34889..35554 | + | 666 | WP_114064479.1 | EscR/YscR/HrcR family type III secretion system export apparatus protein | - |
| CHD15_RS25285 () | 35585..35845 | + | 261 | WP_031570176.1 | EscS/YscS/HrcS family type III secretion system export apparatus protein | - |
| CHD15_RS25290 () | 35850..36623 | + | 774 | WP_031570179.1 | SpaR/YscT/HrcT type III secretion system export apparatus protein | - |
| CHD15_RS25295 () | 36630..37718 | + | 1089 | WP_058108441.1 | EscU/YscU/HrcU family type III secretion system export apparatus switch protein | - |
| CHD15_RS25300 () | 37769..38269 | + | 501 | WP_044128150.1 | type III secretion system translocator chaperone SicA | - |
| CHD15_RS25305 () | 38262..39989 | + | 1728 | WP_114064480.1 | type III secretion system translocon subunit SctE | - |
| CHD15_RS25310 () | 40019..41002 | + | 984 | WP_114064525.1 | type III secretion system translocon subunit SctB | - |
| CHD15_RS25315 () | 41061..42044 | + | 984 | WP_031615763.1 | type III secretion system needle tip protein SctA | - |
| CHD15_RS25320 () | 42125..43306 | + | 1182 | WP_052429261.1 | PrgH/EprH family type III secretion apparatus protein | - |
| CHD15_RS25325 () | 43325..43573 | + | 249 | WP_031570197.1 | type III secretion system needle complex protein | - |
| CHD15_RS25330 () | 43592..43891 | + | 300 | WP_049828546.1 | type III secretion system inner rod subunit SctI | - |
| CHD15_RS25335 () | 43888..44640 | + | 753 | WP_114064481.1 | EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein | - |
| CHD15_RS25340 () | 44633..45229 | + | 597 | WP_080171848.1 | hypothetical protein | - |
| CHD15_RS25345 () | 45168..45866 | + | 699 | WP_114064482.1 | hypothetical protein | - |
| CHD15_RS25350 () | 45958..46860 | + | 903 | WP_114064483.1 | hypothetical protein | - |
| CHD15_RS25355 () | 47058..48755 | + | 1698 | WP_114064484.1 | hypothetical protein | - |
| CHD15_RS25360 () | 48813..49196 | + | 384 | WP_094965613.1 | chaperone SicP | - |
| CHD15_RS26895 () | 49586..49822 | + | 237 | WP_162785945.1 | hypothetical protein | - |
| CHD15_RS25370 () | 49891..50235 | - | 345 | WP_162785946.1 | hypothetical protein | - |
| CHD15_RS25380 () | 50997..51314 | + | 318 | WP_114064488.1 | hypothetical protein | - |
| CHD15_RS25385 () | 51654..52484 | + | 831 | WP_080171870.1 | hypothetical protein | - |
| CHD15_RS25390 () | 52494..52973 | + | 480 | WP_080171839.1 | type III secretion system chaperone | - |
| CHD15_RS25395 () | 52961..53374 | + | 414 | WP_094965619.1 | type III secretion system chaperone | - |
| CHD15_RS26900 () | 53869..54414 | + | 546 | WP_162785947.1 | hypothetical protein | - |
| CHD15_RS26905 () | 54712..55527 | - | 816 | WP_162785948.1 | hypothetical protein | - |
| CHD15_RS25410 () | 56551..57648 | + | 1098 | WP_162785949.1 | hypothetical protein | - |
| CHD15_RS25415 () | 58355..58783 | + | 429 | WP_094965701.1 | universal stress protein | - |
| CHD15_RS26910 () | 59546..60145 | + | 600 | WP_140428495.1 | hypothetical protein | - |
| CHD15_RS25420 () | 60318..60616 | + | 299 | Protein_62 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| CHD15_RS25425 () | 60543..61571 | - | 1029 | WP_205318426.1 | hypothetical protein | - |
| CHD15_RS25430 () | 62256..62546 | + | 291 | WP_114064491.1 | hypothetical protein | - |
| CHD15_RS25435 () | 62536..62913 | + | 378 | Protein_65 | hypothetical protein | - |
| CHD15_RS25445 () | 63325..63729 | - | 405 | WP_071055695.1 | IS200/IS605 family transposase | - |
| CHD15_RS25450 () | 63788..64993 | + | 1206 | WP_162785953.1 | transposase | - |
| CHD15_RS25460 () | 65834..66523 | + | 690 | WP_114064493.1 | RES family NAD+ phosphorylase | - |
| CHD15_RS25465 () | 66555..67244 | - | 690 | WP_114064494.1 | helix-turn-helix domain-containing protein | - |
| CHD15_RS25470 () | 67400..67567 | - | 168 | Protein_70 | helix-turn-helix domain-containing protein | - |
| CHD15_RS25475 () | 68002..69024 | - | 1023 | WP_114064526.1 | adenylate/guanylate cyclase domain-containing protein | - |
| CHD15_RS25480 () | 69378..69911 | - | 534 | WP_097308023.1 | hypothetical protein | - |
| CHD15_RS25485 () | 70226..70969 | - | 744 | WP_114064495.1 | hypothetical protein | - |
| CHD15_RS25490 () | 71001..71417 | - | 417 | WP_065807752.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CHD15_RS25495 () | 71414..71644 | - | 231 | WP_114064496.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CHD15_RS25505 () | 72193..73155 | + | 963 | WP_114064497.1 | hypothetical protein | - |
| CHD15_RS25510 () | 73156..73446 | + | 291 | WP_094965528.1 | cytoplasmic protein | - |
| CHD15_RS27075 () | 73443..73976 | + | 534 | Protein_78 | cytoplasmic protein | - |
| CHD15_RS25520 () | 73989..74771 | + | 783 | WP_058108850.1 | site-specific integrase | - |
| CHD15_RS25525 () | 74986..75849 | - | 864 | WP_000074442.1 | RepB family plasmid replication initiator protein | - |
| CHD15_RS25530 () | 76387..77028 | + | 642 | WP_000511282.1 | ParA family protein | - |
| CHD15_RS25535 () | 77120..77458 | + | 339 | WP_024136783.1 | hypothetical protein | - |
| CHD15_RS25540 () | 77673..78744 | - | 1072 | Protein_83 | translesion error-prone DNA polymerase V subunit UmuC | - |
| CHD15_RS25545 () | 78783..79787 | + | 1005 | WP_045912034.1 | tyrosine-type recombinase/integrase | - |
| CHD15_RS25550 () | 79771..81898 | + | 2128 | Protein_85 | tyrosine-type recombinase/integrase | - |
| CHD15_RS25555 () | 82029..83243 | + | 1215 | WP_162785950.1 | type II site-specific deoxyribonuclease | - |
| CHD15_RS25560 () | 83277..84680 | - | 1404 | WP_072204205.1 | DNA cytosine methyltransferase | - |
| CHD15_RS25565 () | 85013..87151 | - | 2139 | WP_114064498.1 | AAA family ATPase | - |
| CHD15_RS25570 () | 87409..87636 | - | 228 | Protein_89 | DNA polymerase V subunit UmuC | - |
| CHD15_RS25575 () | 87620..88063 | - | 444 | WP_094965539.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CHD15_RS25580 () | 88366..89334 | + | 969 | WP_162785954.1 | StbA family protein | - |
| CHD15_RS25585 () | 89337..89981 | + | 645 | WP_114064500.1 | ABC transporter | - |
| CHD15_RS25590 () | 90068..90408 | + | 341 | Protein_93 | hypothetical protein | - |
| CHD15_RS25595 () | 90844..91752 | + | 909 | WP_176452913.1 | DUF1281 domain-containing protein | - |
| CHD15_RS26915 () | 91788..91943 | + | 156 | WP_162785943.1 | hypothetical protein | - |
| CHD15_RS25600 () | 91936..92286 | + | 351 | WP_000063343.1 | hypothetical protein | - |
| CHD15_RS25605 () | 92619..93551 | + | 933 | WP_094965542.1 | IS110 family transposase | - |
| CHD15_RS25615 () | 94227..94745 | + | 519 | WP_094965544.1 | adenine-specific DNA-methyltransferase | - |
| CHD15_RS25625 () | 95251..95676 | + | 426 | WP_094965545.1 | antirestriction protein | - |
| CHD15_RS25630 () | 95723..96133 | + | 411 | WP_094965547.1 | DUF1380 family protein | - |
| CHD15_RS25635 () | 96130..96321 | + | 192 | WP_080172031.1 | hypothetical protein | - |
| CHD15_RS27080 () | 96300..96800 | - | 501 | Protein_102 | hypothetical protein | - |
| CHD15_RS25650 () | 97315..97545 | + | 231 | WP_058108854.1 | hypothetical protein | - |
| CHD15_RS25655 () | 97587..97820 | + | 234 | WP_031570398.1 | DUF905 domain-containing protein | - |
| CHD15_RS25660 () | 97889..99847 | + | 1959 | WP_114064502.1 | ParB/RepB/Spo0J family partition protein | - |
| CHD15_RS25665 () | 99902..100336 | + | 435 | WP_058108853.1 | conjugation system SOS inhibitor PsiB | - |
| CHD15_RS25670 () | 100333..101052 | + | 720 | WP_080172028.1 | plasmid SOS inhibition protein A | - |
| CHD15_RS25675 () | 101326..101487 | + | 162 | WP_031570426.1 | type I toxin-antitoxin system Hok family toxin | - |
| CHD15_RS27085 () | 101787..102051 | - | 265 | Protein_109 | hypothetical protein | - |
| CHD15_RS25690 () | 102369..102656 | + | 288 | WP_080171881.1 | hypothetical protein | - |
| CHD15_RS25695 () | 102775..103596 | + | 822 | WP_162785951.1 | DUF945 domain-containing protein | - |
| CHD15_RS25700 () | 103873..104325 | - | 453 | WP_058108535.1 | transglycosylase SLT domain-containing protein | - |
| CHD15_RS25710 () | 104836..105231 | + | 396 | WP_114064504.1 | relaxosome protein TraM | - |
| CHD15_RS25715 () | 105394..106158 | + | 765 | Protein_114 | hypothetical protein | - |
| CHD15_RS25720 () | 106298..106447 | + | 150 | WP_001401982.1 | TraY domain-containing protein | - |
| CHD15_RS25725 () | 106745..107116 | + | 372 | WP_080171884.1 | conjugal transfer protein TraA | - |
| CHD15_RS25730 () | 107147..107446 | + | 300 | WP_044127995.1 | type IV conjugative transfer system protein TraL | - |
| CHD15_RS25735 () | 107457..108035 | + | 579 | WP_000365869.1 | type IV conjugative transfer system protein TraE | - |
| CHD15_RS25740 () | 108010..108789 | + | 780 | WP_058108501.1 | type-F conjugative transfer system secretin TraK | - |
| CHD15_RS25745 () | 108782..110116 | + | 1335 | WP_114064505.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| CHD15_RS25750 () | 110128..110640 | + | 513 | WP_114064506.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CHD15_RS25755 () | 110637..113276 | + | 2640 | WP_114064507.1 | type IV secretion system protein TraC | - |
| CHD15_RS25760 () | 113255..113674 | + | 420 | WP_114064508.1 | type-F conjugative transfer system protein TrbI | - |
| CHD15_RS25765 () | 113677..113901 | + | 225 | WP_058108505.1 | TraR/DksA C4-type zinc finger protein | - |
| CHD15_RS25770 () | 113898..114515 | + | 618 | WP_114064509.1 | type-F conjugative transfer system protein TraW | - |
| CHD15_RS25775 () | 114512..115510 | + | 999 | WP_114064510.1 | conjugal transfer pilus assembly protein TraU | - |
| CHD15_RS25785 () | 115880..117019 | - | 1140 | WP_114064527.1 | hypothetical protein | - |
| CHD15_RS25790 () | 117107..117679 | + | 573 | WP_044128052.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CHD15_RS25795 () | 117676..119508 | + | 1833 | WP_114064511.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CHD15_RS25800 () | 119510..120295 | + | 786 | WP_114064512.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CHD15_RS25805 () | 120313..120585 | + | 273 | WP_114064513.1 | hypothetical protein | - |
| CHD15_RS25810 () | 120587..121165 | + | 579 | WP_114064514.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CHD15_RS25815 () | 121162..121551 | + | 390 | WP_114064515.1 | hypothetical protein | - |
| CHD15_RS25825 () | 121804..122301 | + | 498 | WP_162785952.1 | hypothetical protein | - |
| CHD15_RS25830 () | 122438..122815 | + | 378 | WP_000159734.1 | hypothetical protein | - |
| CHD15_RS25835 () | 122879..124285 | + | 1407 | WP_114064517.1 | conjugal transfer protein TraH | - |
| CHD15_RS25840 () | 124285..127194 | + | 2910 | WP_114064518.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CHD15_RS25845 () | 127209..127859 | + | 651 | WP_114064519.1 | hypothetical protein | - |
| CHD15_RS25850 () | 127931..128668 | + | 738 | WP_114064520.1 | complement resistance protein TraT | - |
| CHD15_RS25855 () | 129001..129504 | + | 504 | WP_114064521.1 | DUF2726 domain-containing protein | - |
| CHD15_RS25860 () | 129546..131732 | + | 2187 | WP_080171902.1 | type IV conjugative transfer system coupling protein TraD | - |
| CHD15_RS25865 () | 131732..136888 | + | 5157 | WP_114064522.1 | conjugative transfer relaxase/helicase TraI | - |
| CHD15_RS25870 () | 137036..137599 | + | 564 | WP_044128031.1 | fertility inhibition protein FinO | - |
| CHD15_RS25875 () | 138233..139039 | + | 807 | WP_094965629.1 | hypothetical protein | - |
| CHD15_RS25885 () | 139365..139571 | + | 207 | WP_073998966.1 | type I toxin-antitoxin system Hok family toxin | - |
| CHD15_RS25890 () | 139901..140191 | + | 291 | WP_044128035.1 | DUF1778 domain-containing protein | - |
| CHD15_RS25895 () | 140182..140664 | + | 483 | WP_080171907.1 | GNAT family N-acetyltransferase | - |
| CHD15_RS25900 () | 140947..141204 | + | 258 | WP_044128039.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|