MGE detailed information
MGE type: IScluster/Tn MGE length: 10992 bp
Accession: NZ_CP030165 Location: 78027..89018 Organism: Xanthomonas citri pv. punicae strain LMG7439 Replicon: plasmid unnamed
Accession: NZ_CP030165 Location: 78027..89018 Organism: Xanthomonas citri pv. punicae strain LMG7439 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XapA_RS23545 () | 73410..73661 | + | 252 | WP_005934112.1 | hypothetical protein | - |
| XapA_RS23550 () | 73684..73902 | + | 219 | WP_080585911.1 | conjugal transfer protein TraD | - |
| XapA_RS23555 () | 73934..76462 | + | 2529 | WP_080585912.1 | type IV secretory system conjugative DNA transfer family protein | - |
| XapA_RS23560 () | 76476..76868 | + | 393 | WP_005934119.1 | hypothetical protein | - |
| XapA_RS23565 () | 76981..77901 | - | 921 | WP_005934121.1 | DNA-binding protein | - |
| XapA_RS23570 () | 78027..78951 | - | 925 | Protein_84 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| XapA_RS23575 () | 79159..79392 | + | 234 | Protein_85 | methionine repressor-like protein | - |
| XapA_RS23580 () | 79392..79778 | + | 387 | Protein_86 | putative toxin-antitoxin system toxin component, PIN family | - |
| XapA_RS23585 () | 79812..82781 | + | 2970 | Protein_87 | Tn3 family transposase | - |
| XapA_RS23590 () | 82786..83494 | + | 709 | Protein_88 | UPF0149 family protein | - |
| XapA_RS23595 () | 83964..84164 | + | 201 | WP_005934645.1 | hypothetical protein | - |
| XapA_RS23600 () | 84292..84711 | - | 420 | WP_005934647.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XapA_RS23605 () | 84708..84962 | - | 255 | WP_033480715.1 | Arc family DNA-binding protein | Antitoxin Detail |
| XapA_RS23610 () | 85296..85541 | - | 246 | WP_157383756.1 | hypothetical protein | - |
| XapA_RS23620 () | 86121..87197 | - | 1077 | WP_174854939.1 | avirulence protein | - |
| XapA_RS23625 () | 87331..88384 | - | 1054 | Protein_94 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| XapA_RS23630 () | 88569..89012 | + | 444 | Protein_95 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| XapA_RS23640 () | 89247..93238 | + | 3992 | Protein_96 | TAL effector repeat-containing protein | - |
| XapA_RS23645 () | 93581..93847 | + | 267 | Protein_97 | DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|