MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 158883 bp
Accession: NZ_CP030124 Location: 857023..1015905 Organism: Streptococcus suis strain SH1510 Replicon: chromosome
Accession: NZ_CP030124 Location: 857023..1015905 Organism: Streptococcus suis strain SH1510 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DP111_RS04360 () | 852876..853658 | - | 783 | WP_024395105.1 | hypothetical protein | - |
| DP111_RS04365 () | 853675..854382 | - | 708 | WP_014638281.1 | ABC transporter ATP-binding protein | - |
| DP111_RS04370 () | 854375..854749 | - | 375 | WP_014638280.1 | GntR family transcriptional regulator | - |
| DP111_RS04375 () | 854903..858013 | + | 3111 | WP_024395107.1 | DNA polymerase III subunit alpha | - |
| DP111_RS04380 () | 858098..859108 | + | 1011 | WP_024395108.1 | 6-phosphofructokinase | - |
| DP111_RS04385 () | 859174..860679 | + | 1506 | WP_024385559.1 | pyruvate kinase | - |
| DP111_RS04390 () | 860829..864011 | + | 3183 | WP_114876499.1 | IgM protease | VF |
| DP111_RS04395 () | 864336..865445 | - | 1110 | WP_024395110.1 | FAD-binding oxidoreductase | - |
| DP111_RS04400 () | 865530..866147 | + | 618 | WP_011922094.1 | esterase | - |
| DP111_RS04405 () | 866190..866732 | + | 543 | WP_014736040.1 | signal peptidase I | - |
| DP111_RS04410 () | 866781..868037 | - | 1257 | WP_114876500.1 | ISL3 family transposase IS1193D | Transposase |
| DP111_RS04415 () | 868344..870155 | + | 1812 | WP_024381447.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| DP111_RS04420 () | 870498..871661 | - | 1164 | Protein_809 | IS30 family transposase | - |
| DP111_RS04425 () | 871861..872235 | + | 375 | WP_043032857.1 | DUF1149 family protein | - |
| DP111_RS04430 () | 872237..873088 | + | 852 | WP_024394325.1 | DegV family protein | - |
| DP111_RS04435 () | 873097..873864 | + | 768 | WP_024394324.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| DP111_RS04440 () | 873861..875072 | + | 1212 | WP_024394323.1 | CCA tRNA nucleotidyltransferase | - |
| DP111_RS04445 () | 875065..876933 | + | 1869 | WP_024394322.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| DP111_RS04450 () | 876934..877269 | + | 336 | WP_024394321.1 | hypothetical protein | - |
| DP111_RS04455 () | 877365..878324 | + | 960 | WP_024394320.1 | ROK family glucokinase | - |
| DP111_RS04460 () | 878450..878728 | + | 279 | WP_024394319.1 | hypothetical protein | - |
| DP111_RS04465 () | 878740..879042 | + | 303 | WP_114876501.1 | hypothetical protein | - |
| DP111_RS04470 () | 879095..879934 | + | 840 | WP_024394317.1 | thymidylate synthase | - |
| DP111_RS04475 () | 880110..880622 | + | 513 | WP_024394316.1 | dihydrofolate reductase | - |
| DP111_RS04485 () | 880820..882046 | + | 1227 | WP_002934974.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| DP111_RS04490 () | 882102..882689 | + | 588 | WP_014638915.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| DP111_RS04495 () | 882712..883125 | + | 414 | WP_024394314.1 | nucleoside-diphosphate kinase | - |
| DP111_RS04500 () | 883221..885053 | + | 1833 | WP_002943192.1 | translation elongation factor 4 | - |
| DP111_RS04505 () | 885103..885285 | - | 183 | WP_002934978.1 | 4-oxalocrotonate tautomerase | - |
| DP111_RS04510 () | 885420..886727 | + | 1308 | WP_114876502.1 | excalibur calcium-binding domain-containing protein | - |
| DP111_RS11170 () | 886789..887013 | + | 225 | WP_002934981.1 | hypothetical protein | - |
| DP111_RS04520 () | 887112..887693 | + | 582 | WP_002934983.1 | thymidine kinase | - |
| DP111_RS04525 () | 887974..889053 | + | 1080 | WP_002934984.1 | peptide chain release factor 1 | - |
| DP111_RS04530 () | 889053..889886 | + | 834 | WP_002934985.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| DP111_RS04535 () | 889873..890481 | + | 609 | WP_009909811.1 | threonylcarbamoyl-AMP synthase | - |
| DP111_RS04540 () | 890478..890909 | + | 432 | WP_009909813.1 | GNAT family N-acetyltransferase | - |
| DP111_RS04545 () | 890933..892192 | + | 1260 | WP_002934988.1 | serine hydroxymethyltransferase | - |
| DP111_RS04550 () | 892192..893166 | + | 975 | WP_002934989.1 | nucleoid-associated protein | - |
| DP111_RS04555 () | 893167..893766 | + | 600 | WP_002934990.1 | lysozyme family protein | - |
| DP111_RS04560 () | 893867..894625 | + | 759 | WP_002934991.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| DP111_RS04565 () | 894642..895394 | + | 753 | WP_002934992.1 | hypothetical protein | - |
| DP111_RS04570 () | 895391..895723 | + | 333 | WP_002934993.1 | HIRAN domain-containing protein | - |
| DP111_RS04575 () | 895744..896691 | - | 948 | WP_009909815.1 | hypothetical protein | - |
| DP111_RS04580 () | 896719..897507 | - | 789 | WP_002934995.1 | hypothetical protein | - |
| DP111_RS04585 () | 897708..899405 | + | 1698 | WP_024394313.1 | AAA family ATPase | - |
| DP111_RS04590 () | 899402..900451 | + | 1050 | WP_002934997.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| DP111_RS04595 () | 900613..902163 | - | 1551 | WP_002934999.1 | glutamine-hydrolyzing GMP synthase | - |
| DP111_RS04600 () | 902439..903137 | + | 699 | WP_002943214.1 | GntR family transcriptional regulator | - |
| DP111_RS04605 () | 903240..903572 | + | 333 | WP_002935001.1 | putative DNA-binding protein | - |
| DP111_RS04610 () | 903585..905159 | + | 1575 | WP_002935002.1 | signal recognition particle protein | - |
| DP111_RS04615 () | 905353..906021 | + | 669 | WP_002935003.1 | SatD family protein | - |
| DP111_RS04620 () | 906025..906765 | + | 741 | WP_009909823.1 | DUF3307 domain-containing protein | - |
| DP111_RS04625 () | 906831..907352 | + | 522 | WP_002935005.1 | AAA family ATPase | - |
| DP111_RS04630 () | 907519..908589 | + | 1071 | WP_002935006.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| DP111_RS04635 () | 908659..910167 | - | 1509 | WP_013730362.1 | Phosphomannomutase/phosphoglucomutase | VF |
| DP111_RS04640 () | 910243..911184 | - | 942 | WP_002935009.1 | sensor histidine kinase | - |
| DP111_RS04645 () | 911181..911846 | - | 666 | WP_009909826.1 | Response regulator protein GraR | VF |
| DP111_RS04650 () | 911885..912142 | - | 258 | WP_002935012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DP111_RS04655 () | 912132..912371 | - | 240 | WP_002935014.1 | hypothetical protein | Antitoxin Detail |
| DP111_RS04660 () | 912463..914433 | - | 1971 | WP_114876503.1 | FtsX-like permease family protein | - |
| DP111_RS04665 () | 914434..915186 | - | 753 | WP_024403319.1 | ABC transporter ATP-binding protein YxdL | VF |
| DP111_RS04670 () | 915275..916003 | - | 729 | WP_114876504.1 | ABC transporter permease | - |
| DP111_RS04675 () | 916005..916907 | - | 903 | WP_011922412.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| DP111_RS04680 () | 916928..917305 | - | 378 | WP_011922413.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| DP111_RS11260 () | 917318..917458 | - | 141 | WP_012775106.1 | hypothetical protein | - |
| DP111_RS04690 () | 917598..918764 | - | 1167 | WP_024394863.1 | ATP-grasp domain-containing protein | - |
| DP111_RS04695 () | 918782..919507 | - | 726 | WP_024394864.1 | esterase family protein | - |
| DP111_RS04700 () | 919538..920365 | - | 828 | WP_011922416.1 | alpha/beta hydrolase | - |
| DP111_RS04705 () | 920479..921483 | - | 1005 | WP_024394865.1 | winged helix DNA-binding domain-containing protein | - |
| DP111_RS04710 () | 921548..922383 | - | 836 | Protein_866 | AraC family transcriptional regulator | - |
| DP111_RS04715 () | 922460..923794 | - | 1335 | WP_024394866.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| DP111_RS04720 () | 923990..924741 | - | 752 | Protein_868 | HAD family hydrolase | - |
| DP111_RS04725 () | 924866..925231 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| DP111_RS04730 () | 925297..925791 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
| DP111_RS04735 () | 926368..928461 | - | 2094 | WP_024394484.1 | type I DNA topoisomerase | - |
| DP111_RS04740 () | 928554..929396 | - | 843 | WP_002936492.1 | DNA-processing protein DprA | - |
| DP111_RS04745 () | 929455..929913 | - | 459 | Protein_873 | Maltose O-acetyltransferase | VF |
| DP111_RS04750 () | 930058..930369 | + | 312 | WP_014637902.1 | rhodanese-like domain-containing protein | - |
| DP111_RS04755 () | 930466..931017 | + | 552 | WP_024394485.1 | DUF1836 domain-containing protein | - |
| DP111_RS04760 () | 931007..931657 | + | 651 | WP_002936498.1 | hypothetical protein | VF |
| DP111_RS04765 () | 931690..932700 | - | 1011 | WP_029174502.1 | YdcF family protein | - |
| DP111_RS04770 () | 932703..933476 | - | 774 | WP_024387771.1 | ribonuclease HII | - |
| DP111_RS04775 () | 933463..934314 | - | 852 | WP_024394486.1 | Ribosome biogenesis GTPase A | VF |
| DP111_RS04780 () | 934406..935926 | - | 1521 | WP_114876505.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| DP111_RS04785 () | 936016..936255 | - | 240 | WP_004195677.1 | hypothetical protein | - |
| DP111_RS04790 () | 936541..936768 | - | 228 | WP_023370317.1 | helix-turn-helix domain-containing protein | - |
| DP111_RS04795 () | 937031..939958 | - | 2928 | WP_024394488.1 | NPCBM/NEW2 domain-containing protein | - |
| DP111_RS04800 () | 940081..940974 | - | 894 | WP_024394489.1 | ROK family protein | - |
| DP111_RS04805 () | 940984..942846 | - | 1863 | WP_043032843.1 | alpha-N-acetylgalactosaminidase | - |
| DP111_RS04810 () | 942849..944171 | - | 1323 | WP_029174503.1 | alpha-L-fucosidase | - |
| DP111_RS04815 () | 944168..945007 | - | 840 | WP_024394492.1 | carbohydrate ABC transporter permease | - |
| DP111_RS04820 () | 945017..945937 | - | 921 | WP_024394493.1 | sugar ABC transporter permease | - |
| DP111_RS04825 () | 945996..947303 | - | 1308 | WP_024394494.1 | extracellular solute-binding protein | - |
| DP111_RS04830 () | 947323..947970 | - | 648 | WP_170244825.1 | L-fuculose-phosphate aldolase | - |
| DP111_RS04835 () | 947990..949777 | - | 1788 | WP_024394496.1 | L-fucose isomerase | - |
| DP111_RS04840 () | 949779..951176 | - | 1398 | WP_029750033.1 | rhamnulokinase | - |
| DP111_RS11265 () | 951339..951671 | + | 333 | WP_024394497.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DP111_RS11270 () | 951629..952102 | + | 474 | WP_172064822.1 | plasmid mobilization relaxosome protein MobC | - |
| DP111_RS04850 () | 952104..953399 | + | 1296 | WP_024394500.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DP111_RS04855 () | 953402..953899 | - | 498 | WP_024394501.1 | hypothetical protein | - |
| DP111_RS04860 () | 954063..954755 | + | 693 | WP_024394502.1 | XRE family transcriptional regulator | - |
| DP111_RS04865 () | 954898..956312 | + | 1415 | Protein_898 | Y-family DNA polymerase | - |
| DP111_RS04870 () | 956309..956677 | + | 369 | WP_024394503.1 | hypothetical protein | - |
| DP111_RS04875 () | 956664..956978 | + | 315 | WP_024394504.1 | hypothetical protein | - |
| DP111_RS04880 () | 957016..957786 | - | 771 | WP_024394505.1 | MurR/RpiR family transcriptional regulator | - |
| DP111_RS04885 () | 957799..958311 | - | 513 | WP_114876506.1 | DJ-1/PfpI family protein | - |
| DP111_RS04890 () | 958304..958876 | - | 573 | WP_024394507.1 | DJ-1/PfpI family protein | - |
| DP111_RS04895 () | 958954..960368 | - | 1415 | Protein_904 | 6-phospho-beta-glucosidase | - |
| DP111_RS04900 () | 960389..962209 | - | 1821 | WP_029174858.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| DP111_RS04910 () | 963013..963552 | - | 540 | Protein_906 | CpXC domain-containing protein | - |
| DP111_RS04915 () | 963616..964257 | - | 642 | WP_024394509.1 | single-stranded DNA-binding protein | - |
| DP111_RS04920 () | 964254..967303 | - | 3050 | Protein_908 | DEAD/DEAH box helicase family protein | - |
| DP111_RS04930 () | 968241..971045 | - | 2805 | WP_153308571.1 | hypothetical protein | - |
| DP111_RS04935 () | 971249..971683 | - | 435 | WP_079269357.1 | TnpV protein | - |
| DP111_RS04940 () | 972474..972926 | - | 453 | WP_024394592.1 | hypothetical protein | - |
| DP111_RS04945 () | 972923..973882 | - | 960 | WP_024394593.1 | DNA (cytosine-5-)-methyltransferase | - |
| DP111_RS04950 () | 973860..975062 | - | 1203 | WP_024394594.1 | DNA (cytosine-5-)-methyltransferase | - |
| DP111_RS04955 () | 975141..975365 | - | 225 | WP_014636996.1 | hypothetical protein | - |
| DP111_RS04960 () | 975350..975988 | - | 639 | WP_024394595.1 | DUF3990 domain-containing protein | - |
| DP111_RS04965 () | 976031..976627 | - | 597 | WP_024394596.1 | DUF4366 domain-containing protein | - |
| DP111_RS11175 () | 976611..976826 | - | 216 | WP_023370257.1 | hypothetical protein | - |
| DP111_RS04975 () | 977110..979023 | - | 1914 | WP_024405106.1 | group II intron reverse transcriptase/maturase | - |
| DP111_RS04985 () | 979732..981990 | - | 2259 | WP_114876507.1 | CHAP domain-containing protein | - |
| DP111_RS04995 () | 982287..982847 | - | 561 | WP_024394599.1 | hypothetical protein | - |
| DP111_RS05000 () | 982855..985284 | - | 2430 | Protein_922 | ATP-binding protein | - |
| DP111_RS05005 () | 985241..985609 | - | 369 | WP_023370251.1 | PrgI family protein | - |
| DP111_RS05010 () | 985622..986485 | - | 864 | WP_024394600.1 | hypothetical protein | - |
| DP111_RS05015 () | 986494..986709 | - | 216 | WP_014637003.1 | Maff2 family protein | - |
| DP111_RS05020 () | 986709..987017 | - | 309 | WP_014637004.1 | single-stranded DNA-binding protein | - |
| DP111_RS05025 () | 987090..988877 | - | 1788 | WP_029750046.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DP111_RS05030 () | 988889..989383 | - | 495 | WP_024394602.1 | PcfB family protein | - |
| DP111_RS05035 () | 989373..991925 | - | 2553 | WP_114876508.1 | G5 domain-containing protein | - |
| DP111_RS05040 () | 991922..992881 | - | 960 | WP_024394604.1 | hypothetical protein | - |
| DP111_RS05045 () | 993331..993819 | - | 489 | WP_002936504.1 | YkgJ family cysteine cluster protein | - |
| DP111_RS05050 () | 993871..994518 | - | 648 | WP_114876509.1 | Maf family protein | - |
| DP111_RS05055 () | 994570..996684 | - | 2115 | WP_032512641.1 | Mannosylglucosyl-3-phosphoglycerate phosphatase | VF |
| DP111_RS05060 () | 996815..998086 | - | 1272 | WP_029175040.1 | dihydroorotase | - |
| DP111_RS05065 () | 998126..998779 | - | 654 | WP_024387776.1 | uracil-DNA glycosylase | - |
| DP111_RS05070 () | 998789..999715 | - | 927 | WP_029175039.1 | Putative glycosyltransferase CsbB | VF |
| DP111_RS05075 () | 999824..1000456 | - | 633 | WP_014637891.1 | orotate phosphoribosyltransferase | - |
| DP111_RS05080 () | 1000593..1000919 | - | 327 | WP_029175038.1 | inorganic diphosphatase | - |
| DP111_RS05085 () | 1000912..1001607 | - | 696 | WP_043032920.1 | orotidine-5'-phosphate decarboxylase | - |
| DP111_RS05090 () | 1001772..1002713 | - | 942 | WP_043032921.1 | dihydroorotate dehydrogenase | - |
| DP111_RS05095 () | 1002723..1003613 | - | 891 | WP_079269348.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| DP111_RS05100 () | 1003710..1004621 | + | 912 | WP_012775137.1 | HTH-type transcriptional regulator GltC | VF |
| DP111_RS05105 () | 1004785..1005912 | + | 1128 | WP_013730373.1 | glucose-1-phosphate adenylyltransferase | - |
| DP111_RS05110 () | 1005925..1007040 | + | 1116 | WP_011922501.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| DP111_RS05115 () | 1007049..1008494 | + | 1446 | WP_024394613.1 | glycogen synthase GlgA | - |
| DP111_RS05120 () | 1008567..1010405 | + | 1839 | WP_009909892.1 | 1,4-alpha-glucan branching protein GlgB | - |
| DP111_RS05130 () | 1010679..1011479 | - | 801 | WP_024394614.1 | transporter substrate-binding domain-containing protein | - |
| DP111_RS05135 () | 1011651..1011944 | - | 294 | WP_002935161.1 | transporter substrate-binding domain-containing protein | - |
| DP111_RS05140 () | 1011892..1012152 | + | 261 | Protein_949 | transporter substrate-binding domain-containing protein | - |
| DP111_RS05145 () | 1012131..1012463 | - | 333 | WP_079394058.1 | transporter substrate-binding domain-containing protein | - |
| DP111_RS05150 () | 1012662..1013006 | - | 345 | Protein_951 | 8-oxo-dGTP diphosphatase | - |
| DP111_RS05155 () | 1013116..1014552 | - | 1437 | WP_114876510.1 | hypothetical protein ; Integrase | Integrase |
| DP111_RS05160 () | 1014545..1016161 | - | 1617 | Protein_953 | recombinase family protein | - |
| DP111_RS05165 () | 1016161..1017735 | - | 1575 | WP_114876511.1 | recombinase family protein | - |
| DP111_RS11275 () | 1017834..1017974 | - | 141 | WP_044680669.1 | hypothetical protein | - |
| DP111_RS05175 () | 1018250..1018465 | - | 216 | WP_044680671.1 | helix-turn-helix domain-containing protein | - |
| DP111_RS05180 () | 1018544..1019140 | - | 597 | WP_044680672.1 | response regulator transcription factor | - |
| DP111_RS05185 () | 1019121..1020695 | - | 1575 | WP_044680673.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|