MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP030111 Location: 4138155..4157407 Organism: Escherichia coli strain MCJCHV-1 Replicon: chromosome
Accession: NZ_CP030111 Location: 4138155..4157407 Organism: Escherichia coli strain MCJCHV-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPQ29_RS21330 () | 4133634..4134137 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| DPQ29_RS21335 () | 4134150..4134680 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| DPQ29_RS21340 () | 4134690..4137326 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| DPQ29_RS21345 () | 4137393..4138118 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| DPQ29_RS21350 () | 4138155..4138694 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| DPQ29_RS21355 () | 4138759..4139307 | - | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| DPQ29_RS21365 () | 4139789..4140385 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| DPQ29_RS21370 () | 4140863..4141465 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| DPQ29_RS21385 () | 4142921..4143637 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DPQ29_RS21390 () | 4143657..4144763 | + | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| DPQ29_RS21395 () | 4144828..4145808 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DPQ29_RS21400 () | 4146391..4147631 | - | 1241 | Protein_3928 | helicase YjhR | - |
| DPQ29_RS21410 () | 4147747..4147992 | + | 246 | Protein_3929 | GNAT family N-acetyltransferase | - |
| DPQ29_RS21420 () | 4148369..4148626 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| DPQ29_RS21425 () | 4148638..4149183 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| DPQ29_RS21430 () | 4149239..4149985 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| DPQ29_RS21435 () | 4150154..4150372 | + | 219 | Protein_3933 | hypothetical protein | - |
| DPQ29_RS26505 () | 4150410..4150526 | + | 117 | Protein_3934 | VOC family protein | - |
| DPQ29_RS21440 () | 4150771..4151892 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| DPQ29_RS21445 () | 4151889..4152167 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| DPQ29_RS21450 () | 4152179..4153492 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| DPQ29_RS21455 () | 4153505..4154311 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| DPQ29_RS21460 () | 4154442..4154873 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| DPQ29_RS21465 () | 4154885..4155517 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| DPQ29_RS21470 () | 4155534..4156316 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DPQ29_RS21475 () | 4156619..4157407 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| DPQ29_RS21480 () | 4157412..4158317 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| DPQ29_RS21485 () | 4158328..4160295 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| DPQ29_RS21490 () | 4160402..4161751 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|