MGE detailed information
MGE type: Conjugative plasmid MGE length: 97903 bp
Accession: NZ_CP030067 Location: 1..97903 Organism: Klebsiella pneumoniae strain IA565 Replicon: plasmid pDA11912.2
Accession: NZ_CP030067 Location: 1..97903 Organism: Klebsiella pneumoniae strain IA565 Replicon: plasmid pDA11912.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPF99_RS00895 () | 207..278 | + | 72 | WP_071786674.1 | RepA leader peptide Tap | - |
| DPF99_RS00905 () | 437..1450 | + | 1014 | WP_032445638.1 | replication initiation protein | - |
| DPF99_RS00915 () | 2923..3378 | + | 456 | WP_048271331.1 | hypothetical protein | - |
| DPF99_RS00920 () | 3605..5254 | - | 1650 | WP_064750814.1 | Methyl-accepting chemotaxis protein III | VF |
| DPF99_RS00925 () | 5687..6691 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| DPF99_RS00935 () | 7179..7883 | - | 705 | Protein_5 | IS6 family transposase IS15DII | Transposase |
| DPF99_RS00940 () | 8062..8418 | + | 357 | WP_074188008.1 | ASCH domain-containing protein | - |
| DPF99_RS00945 () | 8479..9381 | - | 903 | Protein_7 | IS481 family transposase | - |
| DPF99_RS00950 () | 9578..10381 | - | 804 | WP_000159991.1 | alpha/beta hydrolase | - |
| DPF99_RS00955 () | 10432..10780 | - | 349 | Protein_9 | DUF2087 domain-containing protein | - |
| DPF99_RS00960 () | 11196..11630 | - | 435 | WP_072010194.1 | GFA family protein | - |
| DPF99_RS00965 () | 11736..12761 | - | 1026 | WP_032445682.1 | MerR family transcriptional regulator | - |
| DPF99_RS00970 () | 13234..14257 | - | 1024 | Protein_12 | IS110 family transposase ISSm1 | Transposase |
| DPF99_RS00975 () | 14281..14724 | - | 444 | Protein_13 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| DPF99_RS00980 () | 15198..15707 | + | 510 | WP_077255035.1 | TOBE domain-containing protein | - |
| DPF99_RS00985 () | 15682..15966 | - | 285 | WP_032445764.1 | DUF2623 family protein | - |
| DPF99_RS00990 () | 16161..16664 | - | 504 | WP_032445762.1 | DUF1543 domain-containing protein | - |
| DPF99_RS00995 () | 17112..17468 | - | 357 | WP_050512795.1 | ASCH domain-containing protein | - |
| DPF99_RS01000 () | 17577..18545 | - | 969 | WP_074187998.1 | IS5 family transposase IS903B | Transposase |
| DPF99_RS01005 () | 18785..19294 | + | 510 | WP_032445709.1 | GNAT family N-acetyltransferase | - |
| DPF99_RS01010 () | 20233..20931 | - | 699 | WP_032445707.1 | DJ-1/PfpI family protein | - |
| DPF99_RS01015 () | 21221..21529 | - | 309 | WP_032445711.1 | hypothetical protein | - |
| DPF99_RS01020 () | 21628..21831 | - | 204 | WP_072010199.1 | hemolysin expression modulator Hha | - |
| DPF99_RS01025 () | 21903..22871 | + | 969 | WP_075211999.1 | IS5 family transposase IS903 | Transposase |
| DPF99_RS01030 () | 23063..23743 | - | 681 | WP_032445676.1 | hypothetical protein | - |
| DPF99_RS01035 () | 24037..25065 | - | 1029 | WP_032445668.1 | Abi family protein | - |
| DPF99_RS01040 () | 25226..25807 | - | 582 | WP_032445670.1 | hypothetical protein | - |
| DPF99_RS01055 () | 26376..26594 | + | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DPF99_RS01060 () | 26596..26901 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DPF99_RS01065 () | 27088..28092 | + | 1005 | WP_032445672.1 | hypothetical protein | - |
| DPF99_RS01070 () | 28290..29084 | + | 795 | WP_048991183.1 | site-specific integrase | - |
| DPF99_RS27375 () | 29171..29368 | - | 198 | WP_032445779.1 | hypothetical protein | - |
| DPF99_RS01075 () | 29532..29711 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| DPF99_RS01080 () | 29831..30457 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| DPF99_RS01085 () | 31082..31957 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| DPF99_RS01090 () | 32369..33640 | - | 1272 | WP_048991181.1 | Y-family DNA polymerase | - |
| DPF99_RS01095 () | 33640..34071 | - | 432 | WP_048991179.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DPF99_RS01100 () | 34306..35277 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| DPF99_RS01105 () | 35280..35951 | + | 672 | WP_001568039.1 | plasmid partitioning/stability family protein | - |
| DPF99_RS01110 () | 36014..36244 | + | 231 | WP_032445747.1 | hypothetical protein | - |
| DPF99_RS01115 () | 36681..37382 | + | 702 | WP_001568041.1 | DNA methylase | - |
| DPF99_RS01120 () | 37382..37603 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| DPF99_RS01125 () | 37613..38032 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| DPF99_RS01130 () | 38086..38853 | + | 768 | WP_032445745.1 | hypothetical protein | - |
| DPF99_RS01135 () | 39486..39914 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| DPF99_RS01140 () | 39957..40463 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| DPF99_RS01145 () | 40506..40697 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| DPF99_RS01150 () | 40885..41139 | + | 255 | WP_032445741.1 | hypothetical protein | - |
| DPF99_RS01155 () | 41174..41491 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| DPF99_RS01170 () | 42287..42829 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| DPF99_RS01175 () | 42878..43126 | + | 249 | WP_032445658.1 | DUF905 domain-containing protein | - |
| DPF99_RS01180 () | 43196..45253 | + | 2058 | WP_032445660.1 | ParB/RepB/Spo0J family partition protein | - |
| DPF99_RS01185 () | 45298..45729 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| DPF99_RS01190 () | 45726..46454 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| DPF99_RS01195 () | 46451..46777 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| DPF99_RS01200 () | 46833..47207 | + | 375 | WP_032445662.1 | hypothetical protein | - |
| DPF99_RS01205 () | 47411..48780 | + | 1370 | WP_085956500.1 | IS3 family transposase ISKpn8 | Transposase |
| DPF99_RS01210 () | 48881..49039 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| DPF99_RS01215 () | 49738..50010 | + | 273 | WP_032445785.1 | hypothetical protein | - |
| DPF99_RS01220 () | 50007..50357 | + | 351 | WP_032445787.1 | hypothetical protein | - |
| DPF99_RS01225 () | 50372..50689 | + | 318 | WP_032445789.1 | hypothetical protein | - |
| DPF99_RS01230 () | 51529..51885 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| DPF99_RS01235 () | 51946..52158 | + | 213 | WP_032445756.1 | hypothetical protein | - |
| DPF99_RS01240 () | 52169..52393 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| DPF99_RS01245 () | 52474..52794 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DPF99_RS01250 () | 52784..53062 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| DPF99_RS01255 () | 53063..53476 | + | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| DPF99_RS01270 () | 54194..54574 | + | 381 | WP_020802391.1 | hypothetical protein | - |
| DPF99_RS01275 () | 54641..54988 | + | 348 | WP_032445771.1 | hypothetical protein | - |
| DPF99_RS01280 () | 55083..55229 | + | 147 | WP_004152750.1 | hypothetical protein | - |
| DPF99_RS01285 () | 55280..56113 | + | 834 | WP_032445769.1 | N-6 DNA methylase | - |
| DPF99_RS01295 () | 56930..57751 | + | 822 | WP_032445732.1 | DUF945 domain-containing protein | - |
| DPF99_RS01300 () | 57784..58113 | + | 330 | WP_074193592.1 | hypothetical protein | - |
| DPF99_RS01305 () | 58146..58631 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| DPF99_RS01310 () | 59022..59438 | + | 417 | WP_074188017.1 | relaxosome protein TraM | - |
| DPF99_RS01315 () | 59638..60354 | + | 717 | WP_074188018.1 | conjugal transfer protein TrbJ | - |
| DPF99_RS01320 () | 60490..60696 | + | 207 | WP_171773970.1 | TraY domain-containing protein | - |
| DPF99_RS01325 () | 60758..60829 | + | 72 | Protein_77 | type IV conjugative transfer system pilin TraA | - |
| DPF99_RS01330 () | 60885..61853 | - | 969 | WP_074187998.1 | IS5 family transposase IS903B | Transposase |
| DPF99_RS01335 () | 61833..62192 | + | 360 | WP_032445227.1 | type IV conjugative transfer system pilin TraA | - |
| DPF99_RS01340 () | 62206..62511 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| DPF99_RS01345 () | 62531..63097 | + | 567 | WP_032445228.1 | type IV conjugative transfer system protein TraE | - |
| DPF99_RS01350 () | 63084..63824 | + | 741 | WP_013214019.1 | type-F conjugative transfer system secretin TraK | - |
| DPF99_RS01355 () | 63824..65248 | + | 1425 | WP_004233801.1 | conjugal transfer protein TraB | - |
| DPF99_RS01360 () | 65241..65837 | + | 597 | WP_032445229.1 | conjugal transfer protein TraP | - |
| DPF99_RS01365 () | 65860..66444 | + | 585 | WP_032445230.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DPF99_RS01370 () | 66817..66996 | + | 180 | WP_077255018.1 | hypothetical protein | - |
| DPF99_RS01375 () | 67024..67313 | + | 290 | Protein_87 | hypothetical protein | - |
| DPF99_RS01380 () | 67337..67555 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| DPF99_RS01385 () | 67556..67873 | + | 318 | WP_032445231.1 | hypothetical protein | - |
| DPF99_RS01390 () | 67940..68344 | + | 405 | WP_032104551.1 | hypothetical protein | - |
| DPF99_RS01395 () | 68387..68686 | + | 300 | WP_055322554.1 | hypothetical protein | - |
| DPF99_RS01400 () | 68694..69092 | + | 399 | WP_075211997.1 | hypothetical protein | - |
| DPF99_RS01405 () | 69164..71803 | + | 2640 | WP_032431388.1 | type IV secretion system protein TraC | - |
| DPF99_RS01410 () | 71803..72192 | + | 390 | WP_032445233.1 | type-F conjugative transfer system protein TrbI | - |
| DPF99_RS01415 () | 72192..72818 | + | 627 | WP_032445234.1 | type-F conjugative transfer system protein TraW | - |
| DPF99_RS01420 () | 72860..73249 | + | 390 | WP_032445235.1 | hypothetical protein | - |
| DPF99_RS01425 () | 73246..74235 | + | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| DPF99_RS01430 () | 74248..74886 | + | 639 | WP_032445236.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DPF99_RS01435 () | 74945..76900 | + | 1956 | WP_032445237.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DPF99_RS01440 () | 76932..77168 | + | 237 | WP_032445238.1 | conjugal transfer protein TrbE | - |
| DPF99_RS01450 () | 77396..77722 | + | 327 | WP_016529362.1 | hypothetical protein | - |
| DPF99_RS01455 () | 77743..78495 | + | 753 | WP_032445240.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DPF99_RS01460 () | 78506..78745 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DPF99_RS01465 () | 78717..79274 | + | 558 | WP_032445241.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DPF99_RS01470 () | 79320..79763 | + | 444 | WP_032445242.1 | F-type conjugal transfer protein TrbF | - |
| DPF99_RS01475 () | 79741..81120 | + | 1380 | WP_074188014.1 | conjugal transfer protein TraH | - |
| DPF99_RS01480 () | 81120..83969 | + | 2850 | WP_048991022.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DPF99_RS01485 () | 83972..84502 | + | 531 | WP_074188016.1 | conjugal transfer protein TraS | - |
| DPF99_RS01490 () | 84691..85422 | + | 732 | WP_004152629.1 | complement resistance protein TraT | - |
| DPF99_RS01495 () | 85782..88064 | + | 2283 | Protein_110 | type IV conjugative transfer system coupling protein TraD | - |
| DPF99_RS01500 () | 88064..93322 | + | 5259 | WP_032445647.1 | Multifunctional conjugation protein TraI | Relaxase |
| DPF99_RS01505 () | 93403..94128 | + | 726 | WP_032445645.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| DPF99_RS01510 () | 94200..94793 | + | 594 | WP_032445643.1 | fertility inhibition protein FinO | - |
| DPF99_RS01515 () | 94954..95556 | + | 603 | WP_074188011.1 | hypothetical protein | - |
| DPF99_RS01525 () | 95883..96533 | + | 651 | WP_016831064.1 | DUF2726 domain-containing protein | - |
| DPF99_RS01530 () | 96530..96838 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| DPF99_RS01535 () | 97014..97493 | + | 480 | WP_075212000.1 | Phospholipase D | VF |
| DPF99_RS01540 () | 97629..97898 | + | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|