MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 68991 bp
Accession: NZ_CP030023 Location: 1245742..1314732 Organism: Streptococcus suis strain ISU2414 Replicon: chromosome
Accession: NZ_CP030023 Location: 1245742..1314732 Organism: Streptococcus suis strain ISU2414 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK877_RS06260 () | 1242360..1243766 | + | 1407 | WP_024409317.1 | 6-phospho-beta-galactosidase | - |
| DK877_RS06265 () | 1243854..1244750 | + | 897 | WP_024409316.1 | aldose 1-epimerase family protein | - |
| DK877_RS06270 () | 1244997..1245221 | + | 225 | WP_003108992.1 | helix-turn-helix domain-containing protein | - |
| DK877_RS06275 () | 1245491..1245739 | + | 249 | WP_029743105.1 | DUF3173 family protein | - |
| DK877_RS06280 () | 1245742..1246947 | + | 1206 | WP_024409315.1 | hypothetical protein ; Integrase | Integrase |
| DK877_RS06285 () | 1247208..1248167 | + | 960 | WP_024383747.1 | hypothetical protein | - |
| DK877_RS06290 () | 1248164..1250758 | + | 2595 | WP_024406075.1 | G5 domain-containing protein | - |
| DK877_RS06295 () | 1250751..1251245 | + | 495 | WP_024383745.1 | PcfB family protein | - |
| DK877_RS06300 () | 1251257..1253044 | + | 1788 | WP_029693403.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DK877_RS06305 () | 1253120..1253428 | + | 309 | WP_024383743.1 | single-stranded DNA-binding protein | - |
| DK877_RS06310 () | 1253428..1253643 | + | 216 | WP_014637003.1 | Maff2 family protein | - |
| DK877_RS06315 () | 1253652..1254515 | + | 864 | WP_024383742.1 | hypothetical protein | - |
| DK877_RS06320 () | 1254528..1254896 | + | 369 | WP_024383741.1 | PrgI family protein | - |
| DK877_RS06325 () | 1254853..1256394 | + | 1542 | WP_180824332.1 | conjugal transfer protein TraE | - |
| DK877_RS06330 () | 1256923..1258596 | + | 1674 | WP_029174920.1 | group II intron reverse transcriptase/maturase | - |
| DK877_RS06335 () | 1258544..1259593 | + | 1050 | WP_099425925.1 | hypothetical protein | - |
| DK877_RS06340 () | 1259601..1262822 | + | 3222 | WP_053338583.1 | CHAP domain-containing protein | - |
| DK877_RS06345 () | 1262833..1263048 | + | 216 | WP_024377527.1 | hypothetical protein | - |
| DK877_RS06350 () | 1263032..1263628 | + | 597 | WP_050571927.1 | DUF4366 domain-containing protein | - |
| DK877_RS06355 () | 1263671..1264309 | + | 639 | WP_024383738.1 | DUF3990 domain-containing protein | - |
| DK877_RS06360 () | 1264294..1264524 | + | 231 | WP_024377524.1 | hypothetical protein | - |
| DK877_RS06365 () | 1264601..1265785 | + | 1185 | WP_029742340.1 | DNA (cytosine-5-)-methyltransferase | - |
| DK877_RS06370 () | 1265782..1266741 | + | 960 | WP_024406079.1 | DNA cytosine methyltransferase | - |
| DK877_RS06375 () | 1266819..1267190 | + | 372 | WP_050571928.1 | hypothetical protein | - |
| DK877_RS06380 () | 1267209..1274480 | + | 7272 | WP_024406080.1 | DEAD/DEAH box helicase family protein | - |
| DK877_RS06385 () | 1274477..1275115 | + | 639 | WP_024383732.1 | single-stranded DNA-binding protein | - |
| DK877_RS06390 () | 1275162..1275455 | - | 294 | WP_024383731.1 | hypothetical protein | - |
| DK877_RS06395 () | 1275442..1275792 | - | 351 | WP_024383730.1 | hypothetical protein | - |
| DK877_RS06400 () | 1275789..1277204 | - | 1416 | WP_024383729.1 | Y-family DNA polymerase | - |
| DK877_RS06405 () | 1277347..1278039 | - | 693 | WP_024383728.1 | XRE family transcriptional regulator | - |
| DK877_RS06410 () | 1278205..1278702 | + | 498 | WP_024383727.1 | hypothetical protein | - |
| DK877_RS06415 () | 1278705..1280000 | - | 1296 | WP_053863303.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DK877_RS06420 () | 1280002..1280355 | - | 354 | WP_024383725.1 | plasmid mobilization relaxosome protein MobC | - |
| DK877_RS06425 () | 1280529..1281299 | - | 771 | WP_029693397.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DK877_RS06430 () | 1281458..1282885 | + | 1428 | WP_014638951.1 | rhamnulokinase | - |
| DK877_RS06435 () | 1282869..1284656 | + | 1788 | WP_024406081.1 | L-fucose isomerase | - |
| DK877_RS06440 () | 1284677..1285315 | + | 639 | WP_024383723.1 | L-fuculose-phosphate aldolase | - |
| DK877_RS06445 () | 1285332..1286630 | + | 1299 | WP_004195663.1 | ABC transporter substrate-binding protein | - |
| DK877_RS06450 () | 1286685..1287605 | + | 921 | WP_004195666.1 | sugar ABC transporter permease | - |
| DK877_RS06455 () | 1287616..1288455 | + | 840 | WP_004195668.1 | carbohydrate ABC transporter permease | - |
| DK877_RS06460 () | 1288452..1289786 | + | 1335 | WP_024406082.1 | alpha-L-fucosidase | - |
| DK877_RS06465 () | 1289776..1291653 | + | 1878 | WP_024406083.1 | alpha-N-acetylgalactosaminidase | - |
| DK877_RS06470 () | 1291655..1292548 | + | 894 | WP_024406084.1 | ROK family protein | - |
| DK877_RS06475 () | 1292691..1295630 | + | 2940 | WP_024383720.1 | NPCBM/NEW2 domain-containing protein | - |
| DK877_RS06480 () | 1295838..1296254 | + | 417 | WP_024383719.1 | hypothetical protein | VF |
| DK877_RS06485 () | 1296590..1296838 | + | 249 | WP_024377501.1 | DUF3173 family protein | - |
| DK877_RS06490 () | 1296831..1298039 | + | 1209 | WP_024406085.1 | hypothetical protein ; Integrase | Integrase |
| DK877_RS06495 () | 1298226..1298975 | + | 750 | WP_002935039.1 | HAD family hydrolase | - |
| DK877_RS06500 () | 1299171..1300505 | + | 1335 | WP_002935038.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| DK877_RS06505 () | 1300582..1301418 | + | 837 | WP_002935037.1 | AraC family transcriptional regulator | - |
| DK877_RS06510 () | 1301483..1302487 | + | 1005 | WP_002935036.1 | winged helix DNA-binding domain-containing protein | - |
| DK877_RS06515 () | 1302601..1303428 | + | 828 | WP_002935033.1 | alpha/beta hydrolase | - |
| DK877_RS06520 () | 1303459..1304205 | + | 747 | WP_002935029.1 | esterase family protein | - |
| DK877_RS06525 () | 1304224..1305390 | + | 1167 | WP_002935028.1 | carbamoyl phosphate synthase large subunit | - |
| DK877_RS06530 () | 1305529..1305666 | + | 138 | WP_002935027.1 | hypothetical protein | - |
| DK877_RS06535 () | 1305679..1306413 | + | 735 | WP_002935025.1 | beta-carotene 15,15'-monooxygenase | - |
| DK877_RS06540 () | 1306512..1306652 | + | 141 | WP_002935023.1 | hypothetical protein | - |
| DK877_RS06545 () | 1306665..1307048 | + | 384 | WP_002935021.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| DK877_RS06550 () | 1307065..1307817 | + | 753 | WP_002935019.1 | hypothetical protein | VF |
| DK877_RS06555 () | 1307818..1309788 | + | 1971 | WP_013730363.1 | FtsX-like permease family protein | - |
| DK877_RS06560 () | 1309880..1310119 | + | 240 | WP_002935014.1 | hypothetical protein | Antitoxin Detail |
| DK877_RS06565 () | 1310109..1310366 | + | 258 | WP_002935012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DK877_RS06570 () | 1310405..1311070 | + | 666 | WP_009909826.1 | hypothetical protein | VF |
| DK877_RS06575 () | 1311067..1312008 | + | 942 | WP_002935009.1 | sensor histidine kinase | - |
| DK877_RS06580 () | 1312084..1313592 | + | 1509 | WP_013730362.1 | hypothetical protein | VF |
| DK877_RS06585 () | 1313662..1314732 | - | 1071 | WP_002935006.1 | hypothetical protein ; Integrase | Integrase |
| DK877_RS06590 () | 1314899..1315420 | - | 522 | WP_002935005.1 | AAA family ATPase | - |
| DK877_RS06595 () | 1315486..1316226 | - | 741 | WP_009909823.1 | DUF3307 domain-containing protein | - |
| DK877_RS06600 () | 1316230..1316898 | - | 669 | WP_002935003.1 | SatD family protein | - |
| DK877_RS06605 () | 1317092..1318666 | - | 1575 | WP_002935002.1 | signal recognition particle protein | - |
| DK877_RS06610 () | 1318679..1319011 | - | 333 | WP_002935001.1 | putative DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|