MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 152699 bp
Accession: NZ_CP030022 Location: 483767..636465 Organism: Streptococcus suis strain ISU2714 Replicon: chromosome
Accession: NZ_CP030022 Location: 483767..636465 Organism: Streptococcus suis strain ISU2714 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK876_RS02395 () | 478905..479213 | - | 309 | WP_002938710.1 | DUF1827 family protein | - |
| DK876_RS02400 () | 479268..479729 | - | 462 | WP_002938708.1 | NUDIX hydrolase | - |
| DK876_RS02405 () | 479915..482143 | - | 2229 | WP_044475287.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| DK876_RS02410 () | 482367..482597 | + | 231 | WP_002938704.1 | DUF1797 family protein | - |
| DK876_RS02415 () | 482723..483412 | + | 690 | WP_002938702.1 | amino acid ABC transporter permease | - |
| DK876_RS02420 () | 483405..484139 | + | 735 | WP_002943067.1 | amino acid ABC transporter ATP-binding protein | - |
| DK876_RS02425 () | 484269..485117 | + | 849 | WP_011922050.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| DK876_RS02430 () | 486566..486859 | + | 294 | WP_002938694.1 | hypothetical protein | - |
| DK876_RS02435 () | 486849..487451 | + | 603 | WP_014636242.1 | signal peptidase I | - |
| DK876_RS02440 () | 487470..487856 | + | 387 | WP_011922052.1 | hypothetical protein | - |
| DK876_RS02445 () | 487857..488246 | - | 390 | Protein_431 | IS5 family transposase IS1515 | Transposase |
| DK876_RS02450 () | 488214..489041 | + | 828 | WP_012775002.1 | hypothetical protein | VF |
| DK876_RS02455 () | 489424..489834 | + | 411 | WP_012775003.1 | MerR family transcriptional regulator | - |
| DK876_RS02460 () | 489860..490171 | - | 312 | WP_012775004.1 | DUF3270 domain-containing protein | - |
| DK876_RS02465 () | 490332..491261 | + | 930 | WP_011922056.1 | U32 family peptidase | - |
| DK876_RS02470 () | 491559..492845 | + | 1287 | WP_014917216.1 | U32 family peptidase | - |
| DK876_RS02475 () | 493261..493584 | - | 324 | WP_011922058.1 | hypothetical protein | - |
| DK876_RS02480 () | 493676..493891 | + | 216 | WP_004194749.1 | YdbC family protein | - |
| DK876_RS02485 () | 493903..494442 | - | 540 | WP_011922059.1 | biotin transporter BioY | - |
| DK876_RS02490 () | 494647..495384 | + | 738 | WP_012775006.1 | cyclase family protein | - |
| DK876_RS02495 () | 495434..496783 | - | 1350 | WP_012775007.1 | glutathione-disulfide reductase | - |
| DK876_RS02500 () | 496997..498154 | + | 1158 | WP_012775008.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DK876_RS02505 () | 498135..498830 | + | 696 | WP_004194759.1 | putative ABC transporter ATP-binding protein YknY | VF |
| DK876_RS02510 () | 498831..500078 | + | 1248 | WP_004194760.1 | ABC transporter permease | - |
| DK876_RS02515 () | 500204..501268 | + | 1065 | WP_011922068.1 | LLM class flavin-dependent oxidoreductase | - |
| DK876_RS02520 () | 501856..503346 | - | 1491 | WP_011922069.1 | lysine--tRNA ligase | - |
| DK876_RS02525 () | 503449..504075 | - | 627 | WP_002938482.1 | histidine phosphatase family protein | - |
| DK876_RS02530 () | 504078..504560 | - | 483 | WP_011922070.1 | cys-tRNA(pro)/cys-tRNA(cys) deacylase | - |
| DK876_RS02535 () | 504560..505402 | - | 843 | WP_009909486.1 | DUF368 domain-containing protein | - |
| DK876_RS02540 () | 505505..506053 | - | 549 | WP_011922072.1 | energy-coupled thiamine transporter ThiT | - |
| DK876_RS02545 () | 506231..507085 | - | 855 | WP_011922073.1 | glycoside hydrolase family 25 protein | - |
| DK876_RS02550 () | 507198..507617 | + | 420 | WP_011922708.1 | hypothetical protein | - |
| DK876_RS02555 () | 507614..507979 | + | 366 | WP_011922709.1 | DUF4430 domain-containing protein | - |
| DK876_RS02560 () | 508116..509330 | + | 1215 | WP_011922075.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| DK876_RS02565 () | 509351..512047 | + | 2697 | WP_011922076.1 | phosphoenolpyruvate carboxylase | - |
| DK876_RS02570 () | 512162..512665 | + | 504 | WP_011922077.1 | RNA polymerase sigma factor YlaC | VF |
| DK876_RS02575 () | 512646..513617 | + | 972 | WP_011922078.1 | anti-sigma factor | - |
| DK876_RS02580 () | 513973..515169 | + | 1197 | WP_012775011.1 | Elongation factor Tu | VF |
| DK876_RS02585 () | 515344..516096 | + | 753 | WP_011922080.1 | triose-phosphate isomerase | - |
| DK876_RS02590 () | 516149..516958 | - | 810 | WP_012775012.1 | sugar-phosphatase | - |
| DK876_RS02595 () | 516948..518261 | - | 1314 | WP_011922082.1 | HD domain-containing protein | - |
| DK876_RS02600 () | 518360..519247 | + | 888 | WP_002936180.1 | anion permease | - |
| DK876_RS02605 () | 519259..519645 | + | 387 | WP_011922083.1 | DUF1934 domain-containing protein | - |
| DK876_RS02610 () | 519917..521080 | - | 1164 | WP_011922710.1 | IS30 family transposase ISSeq6 | Transposase |
| DK876_RS02615 () | 521282..522283 | + | 1002 | WP_014636572.1 | adenosine deaminase | - |
| DK876_RS02620 () | 522327..523109 | - | 783 | WP_011922087.1 | hypothetical protein | - |
| DK876_RS02625 () | 523126..523833 | - | 708 | WP_011922088.1 | ABC transporter ATP-binding protein | - |
| DK876_RS02630 () | 523826..524200 | - | 375 | WP_012775014.1 | GntR family transcriptional regulator | - |
| DK876_RS02635 () | 524354..527464 | + | 3111 | WP_012775015.1 | DNA polymerase III subunit alpha | - |
| DK876_RS02640 () | 527549..528559 | + | 1011 | WP_011922091.1 | 6-phosphofructokinase | - |
| DK876_RS02645 () | 528626..530131 | + | 1506 | WP_002935530.1 | pyruvate kinase | - |
| DK876_RS02650 () | 530292..533717 | + | 3426 | WP_011922092.1 | IgM protease | VF |
| DK876_RS02655 () | 534042..535151 | - | 1110 | WP_011922093.1 | FAD-binding oxidoreductase | - |
| DK876_RS02660 () | 535236..535853 | + | 618 | WP_011922094.1 | esterase | - |
| DK876_RS02665 () | 535896..536438 | + | 543 | WP_011922095.1 | signal peptidase I | - |
| DK876_RS02670 () | 536628..538439 | + | 1812 | WP_012775016.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| DK876_RS02675 () | 538591..539232 | + | 642 | WP_002940990.1 | amino acid ABC transporter permease | - |
| DK876_RS02680 () | 539242..539874 | + | 633 | WP_011922097.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| DK876_RS02685 () | 539901..540731 | + | 831 | WP_024379094.1 | amino acid ABC transporter substrate-binding protein | - |
| DK876_RS02690 () | 542571..543209 | - | 639 | WP_011922101.1 | MBL fold metallo-hydrolase | - |
| DK876_RS02695 () | 543272..545785 | + | 2514 | WP_011922102.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| DK876_RS02700 () | 545945..547021 | + | 1077 | WP_011922103.1 | glutamate 5-kinase | - |
| DK876_RS02705 () | 547086..548324 | + | 1239 | WP_011922104.1 | glutamate-5-semialdehyde dehydrogenase | - |
| DK876_RS02710 () | 548334..549119 | + | 786 | WP_011922105.1 | pyrroline-5-carboxylate reductase | - |
| DK876_RS02715 () | 549142..549546 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| DK876_RS02720 () | 549673..550524 | + | 852 | WP_002938910.1 | DegV family protein | - |
| DK876_RS02725 () | 550623..551882 | - | 1260 | WP_053866570.1 | PLP-dependent aminotransferase family protein | - |
| DK876_RS02730 () | 552005..552739 | + | 735 | WP_012775019.1 | peroxide stress protein YaaA | - |
| DK876_RS02735 () | 552844..554289 | + | 1446 | WP_012775020.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagT | VF |
| DK876_RS02740 () | 554307..554996 | + | 690 | WP_011922111.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| DK876_RS02745 () | 555006..555683 | + | 678 | WP_012775429.1 | Tyrosine-protein kinase CpsD | VF |
| DK876_RS02750 () | 555722..556453 | + | 732 | WP_011922734.1 | Tyrosine-protein phosphatase CpsB | VF |
| DK876_RS02755 () | 556478..557857 | + | 1380 | WP_011922735.1 | putative sugar transferase EpsL | VF |
| DK876_RS02760 () | 557892..559061 | + | 1170 | WP_011922115.1 | glycosyltransferase family 1 protein | - |
| DK876_RS02765 () | 559065..560222 | + | 1158 | WP_002936352.1 | glycosyltransferase family 4 protein | - |
| DK876_RS02770 () | 560536..561981 | + | 1446 | WP_011922116.1 | glycosyltransferase family 2 protein | - |
| DK876_RS02775 () | 562016..563248 | + | 1233 | WP_011922117.1 | polymerase | - |
| DK876_RS02780 () | 563387..564385 | + | 999 | WP_002936347.1 | putative glycosyltransferase EpsJ | VF |
| DK876_RS02785 () | 564378..565382 | + | 1005 | WP_011922118.1 | putative glycosyltransferase EpsJ | VF |
| DK876_RS02790 () | 565422..565733 | + | 312 | WP_009909574.1 | hypothetical protein | - |
| DK876_RS02795 () | 566609..566866 | + | 258 | WP_079394833.1 | N-acylneuraminate cytidylyltransferase | VF |
| DK876_RS02800 () | 567225..568196 | + | 972 | WP_011922741.1 | hypothetical protein | VF |
| DK876_RS02805 () | 568205..569611 | + | 1407 | WP_002936324.1 | hypothetical protein | VF |
| DK876_RS02810 () | 570134..571150 | + | 1017 | WP_002936321.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| DK876_RS02815 () | 571162..572295 | + | 1134 | WP_009909585.1 | Polysialic acid biosynthesis protein P7 | VF |
| DK876_RS02820 () | 572285..572935 | + | 651 | WP_011922122.1 | Putative acetyltransferase EpsM | VF |
| DK876_RS02825 () | 572944..574176 | + | 1233 | WP_012775023.1 | N-acylneuraminate cytidylyltransferase | VF |
| DK876_RS02830 () | 574373..575246 | + | 874 | Protein_508 | IS5 family transposase ISSth7 | Transposase |
| DK876_RS02835 () | 575496..576343 | + | 848 | WP_087892711.1 | IS630 family transposase | - |
| DK876_RS02840 () | 576380..576565 | + | 186 | WP_014635926.1 | hypothetical protein | - |
| DK876_RS02845 () | 576546..576833 | + | 288 | WP_011922127.1 | IS66 family transposase ISDeal1 | Transposase |
| DK876_RS02850 () | 576950..577156 | + | 207 | WP_002936301.1 | IS66 family transposase ISBthe6 | Transposase |
| DK876_RS02855 () | 577110..578442 | + | 1333 | Protein_513 | IS66 family transposase ISSwo2 | Transposase |
| DK876_RS02860 () | 578649..579467 | + | 819 | Protein_514 | IS30 family transposase ISSpn8 | Transposase |
| DK876_RS02865 () | 579827..580434 | - | 608 | Protein_515 | tyrosine-type recombinase/integrase | - |
| DK876_RS02870 () | 580835..581089 | + | 255 | WP_014636268.1 | hypothetical protein | - |
| DK876_RS02875 () | 581108..581488 | + | 381 | WP_014636269.1 | hypothetical protein | - |
| DK876_RS02880 () | 581592..581831 | + | 240 | WP_074390219.1 | hypothetical protein | - |
| DK876_RS02885 () | 581826..584183 | - | 2358 | WP_012775024.1 | hypothetical protein | - |
| DK876_RS02890 () | 584400..585680 | + | 1281 | WP_012775025.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| DK876_RS02895 () | 585689..586180 | + | 492 | WP_011922141.1 | shikimate kinase | - |
| DK876_RS02900 () | 586171..586998 | + | 828 | WP_009909609.1 | prephenate dehydratase | - |
| DK876_RS02905 () | 587010..588335 | + | 1326 | WP_011922144.1 | LCP family protein | - |
| DK876_RS02910 () | 588401..589762 | + | 1362 | WP_014636270.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| DK876_RS02915 () | 589973..590140 | + | 168 | WP_014636271.1 | hypothetical protein | - |
| DK876_RS02920 () | 590143..590961 | + | 819 | WP_014636272.1 | replication initiator protein A | - |
| DK876_RS02925 () | 591110..592465 | + | 1356 | WP_014636274.1 | DNA (cytosine-5-)-methyltransferase | - |
| DK876_RS02930 () | 592449..592877 | + | 429 | WP_014636275.1 | hypothetical protein | - |
| DK876_RS02935 () | 592888..593271 | + | 384 | WP_014636276.1 | hypothetical protein | - |
| DK876_RS02940 () | 593280..593513 | + | 234 | WP_014636277.1 | hypothetical protein | - |
| DK876_RS02945 () | 593516..594100 | + | 585 | WP_014636278.1 | CPBP family intramembrane metalloprotease | - |
| DK876_RS02950 () | 594177..594665 | + | 489 | WP_041179161.1 | hypothetical protein | - |
| DK876_RS02955 () | 594665..596482 | + | 1818 | WP_044475256.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DK876_RS02960 () | 596500..596742 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| DK876_RS02965 () | 596761..597615 | + | 855 | WP_014636281.1 | conjugal transfer protein TrbL | - |
| DK876_RS02970 () | 597677..598030 | + | 354 | WP_014636282.1 | PrgI family protein | - |
| DK876_RS02975 () | 597987..600338 | + | 2352 | WP_014636283.1 | ATPase AAA | - |
| DK876_RS02980 () | 600340..603141 | + | 2802 | WP_015445150.1 | CHAP domain-containing protein | - |
| DK876_RS02985 () | 603278..604288 | + | 1011 | WP_002936451.1 | Abi family protein | - |
| DK876_RS02990 () | 604402..604686 | + | 285 | Protein_540 | CHAP domain-containing protein | - |
| DK876_RS02995 () | 604772..605617 | - | 846 | WP_044475260.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| DK876_RS03000 () | 605614..606204 | - | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| DK876_RS03005 () | 606374..607534 | + | 1161 | Protein_543 | Cell surface antigen I/II | VF |
| DK876_RS03010 () | 607607..607690 | + | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| DK876_RS03015 () | 607815..608552 | + | 738 | WP_001038795.1 | rRNA adenine N-6-methyltransferase | ARG |
| DK876_RS03020 () | 608722..608982 | + | 261 | Protein_546 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| DK876_RS03025 () | 609127..609273 | + | 147 | WP_044475262.1 | hypothetical protein | - |
| DK876_RS03030 () | 609274..613008 | + | 3735 | Protein_548 | Agglutinin receptor | VF |
| DK876_RS03035 () | 613009..613200 | + | 192 | WP_014636288.1 | calcium-binding protein | - |
| DK876_RS03040 () | 613184..613735 | + | 552 | WP_014636289.1 | hypothetical protein | - |
| DK876_RS03045 () | 613784..619732 | + | 5949 | WP_053866574.1 | DEAD/DEAH box helicase family protein | - |
| DK876_RS03050 () | 619713..620087 | + | 375 | WP_001140406.1 | TnpV protein | - |
| DK876_RS03055 () | 620454..622373 | + | 1920 | WP_000691759.1 | Tetracycline resistance protein TetO | VF |
| DK876_RS03060 () | 622425..622598 | + | 174 | WP_011528024.1 | cysteine-rich KTR domain-containing protein | - |
| DK876_RS03065 () | 623088..623597 | + | 510 | WP_000872511.1 | hypothetical protein | VF |
| DK876_RS03070 () | 623692..624117 | + | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK876_RS03075 () | 624201..624674 | + | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK876_RS03080 () | 624828..625859 | + | 1032 | WP_001170965.1 | AAA family ATPase | - |
| DK876_RS03085 () | 626378..627343 | + | 966 | WP_001145977.1 | plasmid recombination protein | - |
| DK876_RS03090 () | 627351..628205 | + | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| DK876_RS03095 () | 628282..628512 | + | 231 | WP_000659121.1 | hypothetical protein | - |
| DK876_RS03100 () | 628583..628774 | + | 192 | WP_000503424.1 | hypothetical protein | - |
| DK876_RS03105 () | 628828..630711 | + | 1884 | WP_043028856.1 | IS607 family transposase ISTsi1 | Transposase |
| DK876_RS03110 () | 630678..631637 | + | 960 | Protein_564 | hypothetical protein | - |
| DK876_RS03115 () | 631708..632007 | + | 300 | WP_014636295.1 | hypothetical protein | - |
| DK876_RS03120 () | 632021..632311 | + | 291 | WP_000893083.1 | hypothetical protein | - |
| DK876_RS03125 () | 632406..633044 | + | 639 | WP_014636296.1 | hypothetical protein | - |
| DK876_RS03130 () | 633084..634184 | + | 1101 | WP_014636297.1 | toprim domain-containing protein | - |
| DK876_RS03135 () | 634212..634439 | + | 228 | WP_000110922.1 | hypothetical protein | - |
| DK876_RS03140 () | 634436..634825 | + | 390 | WP_044475264.1 | hypothetical protein | - |
| DK876_RS03145 () | 634875..635165 | + | 291 | WP_000667951.1 | hypothetical protein | - |
| DK876_RS03150 () | 635235..635711 | + | 477 | WP_000578719.1 | ISNCY family transposase ISH7A | Transposase |
| DK876_RS03155 () | 635711..636478 | + | 768 | WP_001235242.1 | zeta toxin family protein | - |
| DK876_RS03160 () | 636515..639022 | + | 2508 | WP_001213955.1 | AAA family ATPase | - |
| DK876_RS03165 () | 639360..639722 | + | 363 | WP_000140674.1 | hypothetical protein | - |
| DK876_RS03170 () | 639725..640090 | + | 366 | WP_000431640.1 | plasmid mobilization relaxosome protein MobC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|