MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57300 bp
Accession: NZ_CP030020 Location: 967099..1024398 Organism: Streptococcus suis strain ISU2514 Replicon: chromosome
Accession: NZ_CP030020 Location: 967099..1024398 Organism: Streptococcus suis strain ISU2514 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK875_RS04660 () | 962653..963657 | - | 1005 | WP_002935036.1 | winged helix DNA-binding domain-containing protein | - |
| DK875_RS04665 () | 963722..964558 | - | 837 | WP_002935037.1 | AraC family transcriptional regulator | - |
| DK875_RS04670 () | 964635..965969 | - | 1335 | WP_002935038.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| DK875_RS04675 () | 966165..966914 | - | 750 | WP_002935039.1 | HAD family hydrolase | - |
| DK875_RS04680 () | 967099..968298 | - | 1200 | WP_002935040.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DK875_RS04685 () | 968321..968548 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| DK875_RS04690 () | 968826..969050 | - | 225 | WP_002935042.1 | helix-turn-helix domain-containing protein | - |
| DK875_RS04695 () | 969216..969950 | - | 735 | WP_002935043.1 | ABC transporter permease | - |
| DK875_RS04700 () | 969934..970698 | - | 765 | WP_002935044.1 | ABC transporter permease | - |
| DK875_RS04705 () | 970700..971608 | - | 909 | WP_002935046.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| DK875_RS04710 () | 971718..972776 | - | 1059 | Protein_900 | ATP-binding cassette domain-containing protein | - |
| DK875_RS04715 () | 972845..973000 | - | 156 | WP_002935048.1 | type A2 lantipeptide | - |
| DK875_RS04720 () | 973029..973184 | - | 156 | WP_002935049.1 | type A2 lantipeptide | - |
| DK875_RS04725 () | 973539..974237 | + | 699 | WP_002935052.1 | Sensory transduction protein regX3 | VF |
| DK875_RS04730 () | 974253..975608 | + | 1356 | WP_002935054.1 | HAMP domain-containing histidine kinase | - |
| DK875_RS04735 () | 975731..977590 | - | 1860 | WP_002935056.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DK875_RS04740 () | 977577..977942 | - | 366 | WP_002935058.1 | MobC family plasmid mobilization relaxosome protein | - |
| DK875_RS04745 () | 977952..978311 | - | 360 | WP_002935059.1 | hypothetical protein | - |
| DK875_RS04750 () | 978646..981153 | - | 2508 | WP_053866460.1 | AAA family ATPase | - |
| DK875_RS04755 () | 981189..981956 | - | 768 | WP_002935066.1 | zeta toxin family protein | Toxin Detail |
| DK875_RS04760 () | 981956..982432 | - | 477 | WP_002935067.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DK875_RS04765 () | 982502..982792 | - | 291 | WP_002935069.1 | hypothetical protein | - |
| DK875_RS04770 () | 982842..983231 | - | 390 | WP_002935071.1 | hypothetical protein | - |
| DK875_RS04775 () | 983228..983455 | - | 228 | WP_002935073.1 | hypothetical protein | - |
| DK875_RS04780 () | 983509..984585 | - | 1077 | WP_002935075.1 | toprim domain-containing protein | - |
| DK875_RS04785 () | 984648..986504 | - | 1857 | WP_001820670.1 | IS607 family transposase ISNma20 | Transposase |
| DK875_RS04790 () | 986559..986750 | - | 192 | WP_001820669.1 | hypothetical protein | - |
| DK875_RS04795 () | 986822..987052 | - | 231 | WP_001206986.1 | hypothetical protein | - |
| DK875_RS04800 () | 987098..987952 | - | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| DK875_RS04805 () | 987961..988926 | - | 966 | WP_001820668.1 | plasmid recombination protein | - |
| DK875_RS04810 () | 989451..990476 | - | 1026 | WP_001170964.1 | AAA family ATPase | - |
| DK875_RS04815 () | 990647..991105 | - | 459 | Protein_921 | sigma-70 family RNA polymerase sigma factor | - |
| DK875_RS04820 () | 991189..991614 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK875_RS04825 () | 991709..992221 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK875_RS04830 () | 992709..992882 | - | 174 | WP_002779755.1 | cysteine-rich KTR domain-containing protein | - |
| DK875_RS04835 () | 992934..994853 | - | 1920 | WP_000691758.1 | Tetracycline resistance protein TetO | VF |
| DK875_RS04840 () | 995225..995599 | - | 375 | WP_001129922.1 | TnpV protein | - |
| DK875_RS04845 () | 995539..996270 | - | 732 | WP_002935082.1 | hypothetical protein | - |
| DK875_RS04850 () | 996366..996656 | - | 291 | WP_002935084.1 | hypothetical protein | - |
| DK875_RS04855 () | 996670..996969 | - | 300 | WP_024401832.1 | hypothetical protein | - |
| DK875_RS04860 () | 997040..998383 | - | 1344 | WP_024401833.1 | helicase C-terminal domain-containing protein | - |
| DK875_RS04865 () | 998521..1000299 | - | 1779 | WP_024402041.1 | reverse transcriptase/maturase family protein | - |
| DK875_RS04870 () | 1000797..1006259 | - | 5463 | WP_172094308.1 | DEAD/DEAH box helicase family protein | - |
| DK875_RS04875 () | 1006309..1006860 | - | 552 | WP_024401252.1 | hypothetical protein | - |
| DK875_RS04880 () | 1006844..1007035 | - | 192 | WP_001068447.1 | hypothetical protein | - |
| DK875_RS04885 () | 1007036..1011931 | - | 4896 | WP_024412541.1 | Agglutinin receptor | VF |
| DK875_RS04890 () | 1012212..1012802 | + | 591 | WP_024401254.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| DK875_RS04895 () | 1012799..1013644 | + | 846 | WP_024383472.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| DK875_RS04900 () | 1013706..1016507 | - | 2802 | WP_061286116.1 | CHAP domain-containing protein | - |
| DK875_RS04905 () | 1016509..1018860 | - | 2352 | WP_029743459.1 | ATPase AAA | - |
| DK875_RS04910 () | 1018817..1019170 | - | 354 | WP_024381325.1 | PrgI family protein | - |
| DK875_RS04915 () | 1019232..1020086 | - | 855 | WP_024401257.1 | conjugal transfer protein TrbL | - |
| DK875_RS04920 () | 1020104..1020346 | - | 243 | WP_001072182.1 | hypothetical protein | - |
| DK875_RS04925 () | 1020364..1022181 | - | 1818 | WP_024381326.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DK875_RS04930 () | 1022181..1022669 | - | 489 | WP_002936460.1 | hypothetical protein | - |
| DK875_RS04935 () | 1022747..1023331 | - | 585 | WP_053866449.1 | CPBP family intramembrane metalloprotease | - |
| DK875_RS04940 () | 1023334..1023567 | - | 234 | WP_014636637.1 | hypothetical protein | - |
| DK875_RS04945 () | 1023576..1023959 | - | 384 | WP_053866448.1 | arsenate reductase | - |
| DK875_RS04950 () | 1023970..1024398 | - | 429 | WP_053866447.1 | hypothetical protein | - |
| DK875_RS04955 () | 1024382..1025737 | - | 1356 | WP_053866446.1 | DNA (cytosine-5-)-methyltransferase | - |
| DK875_RS04960 () | 1025886..1026704 | - | 819 | WP_024401260.1 | replication initiator protein A | - |
| DK875_RS04965 () | 1026707..1026874 | - | 168 | WP_032499127.1 | hypothetical protein | - |
| DK875_RS04970 () | 1027075..1027440 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| DK875_RS04975 () | 1027506..1028000 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|