MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66557 bp
Accession: NZ_CP030017 Location: 873102..939658 Organism: Streptococcus suis strain ISU1606 Replicon: chromosome
Accession: NZ_CP030017 Location: 873102..939658 Organism: Streptococcus suis strain ISU1606 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK235_RS04260 () | 868716..869720 | - | 1005 | WP_012775107.1 | winged helix DNA-binding domain-containing protein | - |
| DK235_RS04265 () | 869785..870621 | - | 837 | WP_014636394.1 | AraC family transcriptional regulator | - |
| DK235_RS04270 () | 870698..872032 | - | 1335 | WP_011922419.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| DK235_RS04275 () | 872228..872977 | - | 750 | WP_011922420.1 | HAD family hydrolase | - |
| DK235_RS04280 () | 873160..874362 | - | 1203 | WP_024401217.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| DK235_RS04285 () | 874385..874612 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| DK235_RS04290 () | 874890..875114 | - | 225 | WP_002935042.1 | helix-turn-helix domain-containing protein | - |
| DK235_RS04295 () | 875280..876014 | - | 735 | WP_002935043.1 | ABC transporter permease | - |
| DK235_RS04300 () | 875998..876762 | - | 765 | WP_024394868.1 | ABC transporter permease | - |
| DK235_RS04305 () | 876764..877672 | - | 909 | WP_024401216.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| DK235_RS04310 () | 877782..879854 | - | 2073 | WP_053865952.1 | ATP-binding cassette domain-containing protein | - |
| DK235_RS04315 () | 879877..882657 | - | 2781 | WP_024394871.1 | type 2 lantipeptide synthetase LanM family protein | - |
| DK235_RS04320 () | 882676..882843 | - | 168 | WP_074391117.1 | type A2 lantipeptide | - |
| DK235_RS04325 () | 883382..883537 | - | 156 | WP_002935048.1 | type A2 lantipeptide | - |
| DK235_RS04330 () | 883566..883721 | - | 156 | WP_002935049.1 | type A2 lantipeptide | - |
| DK235_RS04335 () | 884076..884774 | + | 699 | WP_002935052.1 | Sensory transduction protein regX3 | VF |
| DK235_RS04340 () | 884790..886145 | + | 1356 | Protein_807 | HAMP domain-containing histidine kinase | - |
| DK235_RS04345 () | 886268..888127 | - | 1860 | WP_053865953.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DK235_RS04350 () | 888114..888479 | - | 366 | WP_053865954.1 | MobC family plasmid mobilization relaxosome protein | - |
| DK235_RS04355 () | 888489..888848 | - | 360 | WP_000529541.1 | hypothetical protein | - |
| DK235_RS04360 () | 889229..890848 | - | 1620 | WP_053865955.1 | ATP-binding protein | - |
| DK235_RS04365 () | 890838..892067 | - | 1230 | WP_024380477.1 | SIR2 family protein | - |
| DK235_RS04370 () | 892064..892846 | - | 783 | WP_053865956.1 | zeta toxin family protein | Toxin Detail |
| DK235_RS04375 () | 892846..893322 | - | 477 | WP_000578719.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| DK235_RS04380 () | 893392..893682 | - | 291 | WP_000667951.1 | hypothetical protein | - |
| DK235_RS04385 () | 893698..894087 | - | 390 | WP_000048066.1 | hypothetical protein | - |
| DK235_RS04390 () | 894084..894311 | - | 228 | WP_000110922.1 | hypothetical protein | - |
| DK235_RS04395 () | 894339..895439 | - | 1101 | WP_000196860.1 | toprim domain-containing protein | - |
| DK235_RS04400 () | 895479..896117 | - | 639 | WP_053865957.1 | hypothetical protein | - |
| DK235_RS04405 () | 896212..896502 | - | 291 | WP_000893083.1 | hypothetical protein | - |
| DK235_RS04410 () | 896516..896815 | - | 300 | WP_017767994.1 | hypothetical protein | - |
| DK235_RS04415 () | 896886..897845 | - | 960 | Protein_822 | helicase | - |
| DK235_RS04420 () | 897812..899695 | - | 1884 | WP_000907414.1 | IS607 family transposase ISTsi1 | Transposase |
| DK235_RS04425 () | 899749..899940 | - | 192 | WP_000503424.1 | hypothetical protein | - |
| DK235_RS04430 () | 900011..900241 | - | 231 | WP_000659121.1 | hypothetical protein | - |
| DK235_RS04435 () | 900318..901172 | - | 855 | WP_053865958.1 | ParB/RepB/Spo0J family partition protein | - |
| DK235_RS04440 () | 901181..902146 | - | 966 | WP_001820668.1 | plasmid recombination protein | - |
| DK235_RS04445 () | 902664..903695 | - | 1032 | WP_001170965.1 | AAA family ATPase | - |
| DK235_RS04450 () | 903849..904322 | - | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK235_RS04455 () | 904406..904831 | - | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| DK235_RS04460 () | 904926..905435 | - | 510 | WP_000872511.1 | hypothetical protein | VF |
| DK235_RS04465 () | 905925..906098 | - | 174 | WP_002779755.1 | cysteine-rich KTR domain-containing protein | - |
| DK235_RS04470 () | 906150..908069 | - | 1920 | WP_053865959.1 | Tetracycline resistance protein TetO | VF |
| DK235_RS04475 () | 908436..908810 | - | 375 | WP_001140406.1 | TnpV protein | - |
| DK235_RS04480 () | 908852..909112 | - | 261 | Protein_835 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| DK235_RS04485 () | 909282..910019 | - | 738 | WP_002321849.1 | rRNA adenine N-6-methyltransferase | ARG |
| DK235_RS04490 () | 910144..910227 | - | 84 | WP_013641314.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| DK235_RS04495 () | 910248..910412 | - | 165 | WP_024410551.1 | peptide-binding protein | - |
| DK235_RS04500 () | 910501..910989 | - | 489 | Protein_839 | hypothetical protein | - |
| DK235_RS04505 () | 911082..912860 | - | 1779 | WP_001258309.1 | reverse transcriptase/maturase family protein | - |
| DK235_RS04510 () | 913358..918832 | - | 5475 | WP_053865960.1 | DEAD/DEAH box helicase family protein | - |
| DK235_RS04515 () | 918881..919432 | - | 552 | WP_053865961.1 | hypothetical protein | - |
| DK235_RS04520 () | 919416..919607 | - | 192 | WP_001068448.1 | calcium-binding protein | - |
| DK235_RS04525 () | 919608..924503 | - | 4896 | WP_053865962.1 | LPXTG cell wall anchor domain-containing protein | - |
| DK235_RS04530 () | 924782..925372 | + | 591 | WP_000037237.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| DK235_RS04535 () | 925369..926214 | + | 846 | WP_001030299.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| DK235_RS04540 () | 926277..929078 | - | 2802 | WP_053865963.1 | CHAP domain-containing protein | - |
| DK235_RS04545 () | 929080..931431 | - | 2352 | WP_053865964.1 | AAA family ATPase | - |
| DK235_RS04550 () | 931388..931741 | - | 354 | WP_053865965.1 | PrgI family protein | - |
| DK235_RS04555 () | 931803..932657 | - | 855 | WP_079732919.1 | conjugal transfer protein TrbL | - |
| DK235_RS04560 () | 932676..932918 | - | 243 | WP_001072171.1 | hypothetical protein | - |
| DK235_RS04565 () | 932936..934753 | - | 1818 | WP_053865966.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DK235_RS04570 () | 934753..935241 | - | 489 | WP_053865967.1 | hypothetical protein | - |
| DK235_RS04575 () | 935318..935902 | - | 585 | WP_053865968.1 | CPBP family intramembrane metalloprotease | - |
| DK235_RS04580 () | 935905..936138 | - | 234 | WP_014636955.1 | hypothetical protein | - |
| DK235_RS04585 () | 936147..936530 | - | 384 | WP_014636956.1 | hypothetical protein | - |
| DK235_RS04590 () | 936541..936969 | - | 429 | WP_024399352.1 | hypothetical protein | - |
| DK235_RS04595 () | 936953..938308 | - | 1356 | WP_053865969.1 | DNA (cytosine-5-)-methyltransferase | - |
| DK235_RS04600 () | 938456..939274 | - | 819 | WP_053865970.1 | replication initiator protein A | - |
| DK235_RS04605 () | 939271..939444 | - | 174 | WP_053865971.1 | hypothetical protein | - |
| DK235_RS04610 () | 939644..940009 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| DK235_RS04615 () | 940075..940569 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
| DK235_RS04620 () | 941146..943239 | - | 2094 | WP_012775128.1 | type I DNA topoisomerase | - |
| DK235_RS04625 () | 943332..944174 | - | 843 | WP_012775129.1 | DNA-processing protein DprA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|