MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67730 bp
Accession: NZ_CP030006 Location: 1..67730 Organism: Salmonella enterica subsp. enterica serovar Berta strain SA20141895 Replicon: plasmid pSA20141895.1
Accession: NZ_CP030006 Location: 1..67730 Organism: Salmonella enterica subsp. enterica serovar Berta strain SA20141895 Replicon: plasmid pSA20141895.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DOE61_RS24060 () | 1340..2302 | - | 963 | WP_000169858.1 | hypothetical protein | - |
| DOE61_RS24065 () | 2307..2552 | - | 246 | WP_000368362.1 | hypothetical protein | - |
| DOE61_RS24070 () | 3262..3480 | + | 219 | WP_000813642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DOE61_RS24075 () | 3482..3787 | + | 306 | WP_001159874.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DOE61_RS24080 () | 3789..4079 | + | 291 | WP_001266178.1 | hypothetical protein | - |
| DOE61_RS24085 () | 4442..4611 | + | 170 | Protein_5 | cytoplasmic protein | - |
| DOE61_RS24090 () | 4624..5406 | + | 783 | WP_000082174.1 | site-specific integrase | - |
| DOE61_RS24095 () | 5910..6605 | + | 696 | WP_000389613.1 | CPBP family intramembrane metalloprotease | - |
| DOE61_RS24100 () | 6912..7146 | - | 235 | Protein_8 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DOE61_RS24105 () | 8131..9060 | - | 930 | WP_000728916.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DOE61_RS24110 () | 9364..9621 | + | 258 | Protein_10 | hypothetical protein | - |
| DOE61_RS24115 () | 10691..10945 | - | 255 | WP_001187274.1 | hypothetical protein | - |
| DOE61_RS24120 () | 11061..11723 | - | 663 | WP_000520510.1 | peptidyl-arginine deiminase | - |
| DOE61_RS24125 () | 11910..12728 | - | 819 | WP_031610040.1 | tyrosine-type recombinase/integrase | - |
| DOE61_RS24130 () | 13147..13440 | - | 294 | WP_001123824.1 | hypothetical protein | - |
| DOE61_RS24135 () | 13490..13918 | - | 429 | WP_000590032.1 | hypothetical protein | - |
| DOE61_RS24140 () | 13978..14265 | - | 288 | WP_000777022.1 | hypothetical protein | - |
| DOE61_RS24145 () | 14764..15255 | + | 492 | WP_000872472.1 | transcription termination factor NusG | - |
| DOE61_RS24150 () | 15312..15767 | + | 456 | WP_001287806.1 | hypothetical protein | - |
| DOE61_RS24155 () | 16117..16368 | + | 252 | WP_000213776.1 | hypothetical protein | - |
| DOE61_RS24160 () | 16407..17105 | + | 699 | WP_015062745.1 | lytic transglycosylase domain-containing protein | - |
| DOE61_RS24165 () | 17080..17433 | + | 354 | WP_001037906.1 | hypothetical protein | - |
| DOE61_RS24170 () | 17433..17804 | + | 372 | WP_015062746.1 | VirB3 family type IV secretion system protein | - |
| DOE61_RS24175 () | 17761..20253 | + | 2493 | WP_001150380.1 | VirB4 family type IV secretion system protein | - |
| DOE61_RS24180 () | 20419..21495 | + | 1077 | WP_024135576.1 | Fic family protein | - |
| DOE61_RS24190 () | 21802..22479 | + | 678 | WP_001086129.1 | conjugal transfer protein | - |
| DOE61_RS24195 () | 22561..22959 | + | 399 | WP_000821526.1 | hypothetical protein | - |
| DOE61_RS24200 () | 22968..23912 | + | 945 | WP_000963868.1 | type IV secretion system protein | - |
| DOE61_RS24205 () | 24068..24919 | + | 852 | WP_079945420.1 | type IV secretion system protein | - |
| DOE61_RS24210 () | 24916..25731 | + | 816 | WP_000206612.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| DOE61_RS24215 () | 25728..27068 | + | 1341 | WP_001070720.1 | TrbI/VirB10 family protein | - |
| DOE61_RS24220 () | 27196..27408 | + | 213 | WP_000772401.1 | hypothetical protein | - |
| DOE61_RS24225 () | 27413..28480 | + | 1068 | WP_001279010.1 | P-type DNA transfer ATPase VirB11 | - |
| DOE61_RS24230 () | 28488..28853 | + | 366 | WP_001668757.1 | hypothetical protein | - |
| DOE61_RS24235 () | 28853..30472 | + | 1620 | WP_023262151.1 | type IV secretory system conjugative DNA transfer family protein | - |
| DOE61_RS24240 () | 30570..30881 | + | 312 | WP_015062751.1 | IncN plasmid KikA protein | - |
| DOE61_RS24245 () | 31223..31903 | + | 681 | WP_001668756.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| DOE61_RS24250 () | 32016..33719 | + | 1704 | WP_114052112.1 | PilN family type IVB pilus formation outer membrane protein | - |
| DOE61_RS24255 () | 33709..35097 | + | 1389 | WP_000457431.1 | type 4b pilus protein PilO2 | - |
| DOE61_RS24260 () | 35075..35533 | + | 459 | WP_000024175.1 | type IV pilus biogenesis protein PilP | - |
| DOE61_RS24265 () | 35548..37110 | + | 1563 | WP_080110438.1 | Flp pilus assembly complex ATPase component TadA | - |
| DOE61_RS24270 () | 37097..38161 | + | 1065 | WP_001079825.1 | type II secretion system F family protein | - |
| DOE61_RS24275 () | 38218..38730 | + | 513 | WP_000768888.1 | hypothetical protein | - |
| DOE61_RS24280 () | 38782..39720 | + | 939 | WP_001081000.1 | Flp pilus assembly complex ATPase component TadA | - |
| DOE61_RS24285 () | 39736..41052 | + | 1317 | WP_000996147.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DOE61_RS24290 () | 41127..41546 | + | 420 | WP_000834558.1 | type IV pilus biogenesis protein PilM | - |
| DOE61_RS24295 () | 41549..42169 | + | 621 | WP_000220345.1 | prepilin peptidase | - |
| DOE61_RS24300 () | 42166..42648 | + | 483 | WP_001078616.1 | lytic transglycosylase domain-containing protein | - |
| DOE61_RS24305 () | 42650..43036 | + | 387 | WP_000220759.1 | hypothetical protein | - |
| DOE61_RS24310 () | 43063..43488 | + | 426 | WP_000897366.1 | hypothetical protein | - |
| DOE61_RS24315 () | 43636..44178 | + | 543 | WP_000157063.1 | single-stranded DNA-binding protein | - |
| DOE61_RS24320 () | 44243..46528 | + | 2286 | WP_079945418.1 | type IA DNA topoisomerase | - |
| DOE61_RS24325 () | 46877..47059 | + | 183 | WP_000833472.1 | type II toxin-antitoxin system HicA family toxin | - |
| DOE61_RS24330 () | 47084..47521 | + | 438 | WP_000466316.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| DOE61_RS24335 () | 47840..48268 | + | 429 | WP_000342968.1 | hypothetical protein | - |
| DOE61_RS24340 () | 48265..48972 | + | 708 | WP_000783363.1 | hypothetical protein | - |
| DOE61_RS24345 () | 48980..49657 | + | 678 | WP_001282465.1 | hypothetical protein | - |
| DOE61_RS24350 () | 49963..50313 | + | 351 | WP_001293490.1 | hypothetical protein | - |
| DOE61_RS24355 () | 50303..53995 | + | 3693 | WP_000908574.1 | hypothetical protein | - |
| DOE61_RS24360 () | 54234..54494 | + | 261 | WP_001278276.1 | replication regulatory protein RepA | - |
| DOE61_RS24370 () | 54752..54829 | + | 78 | WP_031606513.1 | RepA leader peptide Tap | - |
| DOE61_RS24375 () | 54810..55682 | + | 873 | WP_065304522.1 | incFII family plasmid replication initiator RepA | - |
| DOE61_RS24380 () | 57345..58292 | - | 948 | WP_000970299.1 | LysR family transcriptional regulator | - |
| DOE61_RS24385 () | 58770..59024 | - | 255 | WP_024135575.1 | PerC family transcriptional regulator | - |
| DOE61_RS24390 () | 59055..59696 | - | 642 | WP_000502861.1 | ParB/RepB/Spo0J family partition protein | - |
| DOE61_RS24395 () | 59681..60907 | - | 1227 | WP_015062775.1 | phosphoadenosine phosphosulfate reductase | - |
| DOE61_RS24400 () | 61212..62033 | - | 822 | WP_114052113.1 | polysaccharide deacetylase family protein | - |
| DOE61_RS24405 () | 62441..62911 | - | 471 | WP_000266945.1 | pilin structural protein SafD | - |
| DOE61_RS24410 () | 62933..65443 | - | 2511 | WP_080066985.1 | fimbrial biogenesis outer membrane usher protein | - |
| DOE61_RS24415 () | 65467..66207 | - | 741 | WP_000691919.1 | pili assembly chaperone SafB | - |
| DOE61_RS24420 () | 66282..66779 | - | 498 | WP_000526848.1 | hypothetical protein | - |
| DOE61_RS24425 () | 66908..67402 | - | 495 | WP_114052114.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|