MGE detailed information
MGE type: Conjugative plasmid MGE length: 113340 bp
Accession: NZ_CP029975 Location: 1..113340 Organism: Escherichia coli strain 51008369SK1 Replicon: plasmid p51008369SK1_B
Accession: NZ_CP029975 Location: 1..113340 Organism: Escherichia coli strain 51008369SK1 Replicon: plasmid p51008369SK1_B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DNQ41_RS25335 () | 522..980 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| DNQ41_RS25340 () | 977..1795 | + | 819 | WP_032220737.1 | hypothetical protein | VF |
| DNQ41_RS25345 () | 1792..2940 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| DNQ41_RS25350 () | 2937..3227 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| DNQ41_RS25355 () | 3242..3793 | + | 552 | WP_000014586.1 | Phospholipase D | VF |
| DNQ41_RS25360 () | 3883..7647 | + | 3765 | WP_033560228.1 | DNA primase | - |
| DNQ41_RS25365 () | 7665..8012 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| DNQ41_RS25370 () | 8009..8701 | + | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| DNQ41_RS25375 () | 8712..9695 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| DNQ41_RS25380 () | 9698..10987 | + | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| DNQ41_RS25385 () | 10987..11691 | + | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| DNQ41_RS25390 () | 11691..12218 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| DNQ41_RS25395 () | 12269..12673 | + | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| DNQ41_RS25400 () | 12737..12925 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| DNQ41_RS25405 () | 12909..13709 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| DNQ41_RS25410 () | 13799..16843 | + | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| DNQ41_RS25415 () | 16843..17457 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| DNQ41_RS25420 () | 17424..18626 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| DNQ41_RS25425 () | 18655..19239 | + | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| DNQ41_RS25430 () | 19336..21504 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| DNQ41_RS25435 () | 21575..22237 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DNQ41_RS25440 () | 22335..22544 | + | 210 | WP_032178830.1 | hemolysin expression modulator Hha | - |
| DNQ41_RS25445 () | 22876..23280 | - | 405 | WP_001175009.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| DNQ41_RS25450 () | 23339..24565 | + | 1227 | WP_024186316.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| DNQ41_RS27925 () | 24610..24747 | + | 138 | WP_047088497.1 | hypothetical protein | - |
| DNQ41_RS25455 () | 25407..25658 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| DNQ41_RS25460 () | 25730..25882 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 25932..25994 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 25932..25994 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 25932..25994 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 25932..25994 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| DNQ41_RS25465 () | 26174..27382 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| DNQ41_RS25470 () | 27401..28471 | + | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| DNQ41_RS25475 () | 28464..30755 | + | 2292 | WP_001289275.1 | hypothetical protein | - |
| DNQ41_RS25480 () | 30792..33491 | - | 2700 | WP_006855641.1 | Protein TraI | Relaxase |
| DNQ41_RS25485 () | 33502..33834 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DNQ41_RS25490 () | 34068..34403 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DNQ41_RS25495 () | 34489..35337 | - | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| DNQ41_RS27930 () | 35686..35883 | + | 198 | WP_001412266.1 | hypothetical protein | - |
| DNQ41_RS25510 () | 35917..36168 | + | 252 | WP_065793177.1 | helix-turn-helix domain-containing protein | - |
| DNQ41_RS27935 () | 36199..36369 | - | 171 | WP_000150325.1 | hypothetical protein | - |
| DNQ41_RS25515 () | 36431..37372 | - | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| DNQ41_RS25520 () | 37437..37703 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| DNQ41_RS25525 () | 37795..38229 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| DNQ41_RS25540 () | 38958..39458 | - | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| DNQ41_RS25550 () | 39921..40517 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| DNQ41_RS25555 () | 40514..41233 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| DNQ41_RS25560 () | 41230..41664 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| DNQ41_RS25565 () | 41719..43677 | - | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| DNQ41_RS25570 () | 43736..43969 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| DNQ41_RS25575 () | 44027..44554 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| DNQ41_RS25585 () | 44923..44991 | + | 69 | Protein_48 | pilus protein | - |
| DNQ41_RS25590 () | 45722..47389 | + | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| DNQ41_RS25605 () | 47667..47858 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| DNQ41_RS25610 () | 47855..48277 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| DNQ41_RS25615 () | 48324..48626 | - | 303 | WP_072132163.1 | antirestriction protein | - |
| DNQ41_RS27765 () | 49167..49937 | - | 771 | WP_001044393.1 | hypothetical protein | - |
| DNQ41_RS25630 () | 49988..50422 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| DNQ41_RS25635 () | 50434..50655 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| DNQ41_RS25640 () | 50656..51339 | - | 684 | WP_000086178.1 | DNA methylase | - |
| DNQ41_RS25645 () | 51416..51727 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| DNQ41_RS25650 () | 51724..52626 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| DNQ41_RS25660 () | 53044..53292 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| DNQ41_RS25665 () | 53289..53726 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DNQ41_RS25670 () | 53726..55000 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| DNQ41_RS25675 () | 55002..55418 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| DNQ41_RS25680 () | 55411..56391 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| DNQ41_RS25685 () | 56805..57113 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| DNQ41_RS25690 () | 57200..57844 | - | 645 | WP_001144036.1 | ParA family protein | - |
| DNQ41_RS25695 () | 58024..58803 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| DNQ41_RS25700 () | 58805..59218 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| DNQ41_RS25705 () | 59750..60676 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| DNQ41_RS25710 () | 60721..60978 | + | 258 | WP_001596999.1 | hypothetical protein | - |
| DNQ41_RS25715 () | 61012..61716 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DNQ41_RS25720 () | 61782..62066 | + | 285 | Protein_71 | recombinase family protein | - |
| DNQ41_RS25730 () | 62413..63426 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| DNQ41_RS25735 () | 63583..64056 | + | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| DNQ41_RS25740 () | 64149..64940 | + | 792 | WP_001206317.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DNQ41_RS25745 () | 65104..65451 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| DNQ41_RS25750 () | 65445..66254 | + | 810 | Protein_76 | Dihydropteroate synthase | ARG |
| DNQ41_RS25755 () | 66307..67011 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DNQ41_RS25760 () | 67133..67993 | + | 861 | WP_021561477.1 | Beta-lactamase TEM | ARG |
| DNQ41_RS25765 () | 68147..70519 | + | 2373 | Protein_79 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| DNQ41_RS25770 () | 70553..70825 | + | 273 | Protein_80 | IS91 family transposase ISVsa3 | Transposase |
| DNQ41_RS27940 () | 71294..71740 | + | 447 | Protein_81 | DUF3363 domain-containing protein | - |
| DNQ41_RS25780 () | 71957..73171 | + | 1215 | WP_039026029.1 | Inner membrane transport protein YdhC | ARG |
| DNQ41_RS25785 () | 73199..73504 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| DNQ41_RS25790 () | 73616..75109 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| DNQ41_RS25800 () | 75345..75587 | - | 243 | Protein_85 | phosphoglucosamine mutase | - |
| DNQ41_RS25805 () | 75674..76489 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| DNQ41_RS25815 () | 76705..77409 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DNQ41_RS25825 () | 77995..78339 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| DNQ41_RS25830 () | 78515..79516 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| DNQ41_RS25835 () | 79867..80124 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| DNQ41_RS25840 () | 80124..80714 | + | 591 | WP_000194553.1 | hypothetical protein | - |
| DNQ41_RS25845 () | 80734..81081 | - | 348 | WP_001407239.1 | hypothetical protein | - |
| DNQ41_RS25850 () | 81200..81547 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| DNQ41_RS25855 () | 81565..83445 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| DNQ41_RS25860 () | 83724..85070 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| DNQ41_RS25870 () | 85424..86026 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| DNQ41_RS25875 () | 86082..86576 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| DNQ41_RS27945 () | 86576..86842 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| DNQ41_RS25890 () | 87319..87792 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| DNQ41_RS25895 () | 87909..88757 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| DNQ41_RS25900 () | 88797..89078 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DNQ41_RS25905 () | 89075..89344 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| DNQ41_RS27770 () | 89399..89557 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| DNQ41_RS25920 () | 90253..91284 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| DNQ41_RS25935 () | 92257..92520 | + | 264 | WP_001324596.1 | ash family protein | - |
| DNQ41_RS25940 () | 92438..92725 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| DNQ41_RS25950 () | 93167..93700 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| DNQ41_RS25960 () | 93954..94637 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| DNQ41_RS25965 () | 94651..95217 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| DNQ41_RS25970 () | 95485..95739 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| DNQ41_RS25975 () | 95782..96234 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| DNQ41_RS25990 () | 96908..97974 | + | 1067 | Protein_112 | type IV pilus biogenesis lipoprotein PilL | - |
| DNQ41_RS25995 () | 97974..98411 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| DNQ41_RS26000 () | 98425..100107 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| DNQ41_RS26005 () | 100100..101395 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| DNQ41_RS26010 () | 101382..101834 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| DNQ41_RS26015 () | 101845..103398 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DNQ41_RS26020 () | 103411..104508 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DNQ41_RS26025 () | 104526..105140 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| DNQ41_RS26030 () | 105150..105710 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| DNQ41_RS26035 () | 105695..106351 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| DNQ41_RS26040 () | 106351..107774 | + | 1424 | Protein_122 | hypothetical protein | VF |
| DNQ41_RS27950 () | 107771..107968 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| DNQ41_RS26075 () | 109406..110560 | + | 1155 | WP_001139955.1 | integrase | - |
| DNQ41_RS26080 () | 110711..111535 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| DNQ41_RS26085 () | 111621..112823 | + | 1203 | WP_065793176.1 | conjugal transfer protein TraF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|