MGE detailed information
MGE type: Conjugative plasmid MGE length: 71718 bp
Accession: NZ_CP029974 Location: 1..71718 Organism: Escherichia coli strain 51008369SK1 Replicon: plasmid p51008369SK1_A
Accession: NZ_CP029974 Location: 1..71718 Organism: Escherichia coli strain 51008369SK1 Replicon: plasmid p51008369SK1_A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DNQ41_RS24820 () | 241..1062 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| DNQ41_RS24825 () | 1173..1469 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| DNQ41_RS27905 () | 1769..2146 | + | 378 | Protein_2 | hypothetical protein | - |
| DNQ41_RS24845 () | 2384..2542 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 2586..2810 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2586..2810 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2586..2810 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2586..2810 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| DNQ41_RS27745 () | 2622..2801 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| DNQ41_RS24850 () | 2822..3541 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| DNQ41_RS24855 () | 3538..3972 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| DNQ41_RS24860 () | 4041..6064 | - | 2024 | Protein_7 | ParB/RepB/Spo0J family partition protein | - |
| DNQ41_RS24865 () | 6125..6358 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| DNQ41_RS24870 () | 6416..6943 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| DNQ41_RS24885 () | 7709..8026 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| DNQ41_RS24890 () | 8023..8556 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| DNQ41_RS24895 () | 8650..9795 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| DNQ41_RS24900 () | 10192..10380 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| DNQ41_RS24905 () | 10390..11589 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| DNQ41_RS24920 () | 12181..12744 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| DNQ41_RS24925 () | 12790..14151 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| DNQ41_RS24930 () | 14203..14433 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| DNQ41_RS27750 () | 14950..15198 | + | 249 | WP_001403191.1 | hypothetical protein | - |
| DNQ41_RS24940 () | 15833..17500 | + | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| DNQ41_RS24945 () | 17816..18007 | - | 192 | WP_001024835.1 | hypothetical protein | - |
| DNQ41_RS24950 () | 18004..18426 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| DNQ41_RS24955 () | 18473..18775 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| DNQ41_RS27910 () | 19316..20092 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| DNQ41_RS24970 () | 20143..20577 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| DNQ41_RS24975 () | 20591..20812 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| DNQ41_RS24980 () | 20813..21496 | - | 684 | WP_000085883.1 | DNA methylase | - |
| DNQ41_RS24985 () | 21573..21866 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| DNQ41_RS24990 () | 22014..22976 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| DNQ41_RS24995 () | 22979..23329 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| DNQ41_RS25000 () | 23452..23733 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| DNQ41_RS25005 () | 23861..24095 | - | 235 | Protein_31 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DNQ41_RS25020 () | 25544..26241 | - | 698 | Protein_32 | IS1 family transposase IS1R | Transposase |
| DNQ41_RS27915 () | 26889..27059 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| DNQ41_RS25035 () | 27004..27741 | - | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| DNQ41_RS25040 () | 27867..27962 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| DNQ41_RS25045 () | 28097..28801 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| DNQ41_RS25050 () | 28867..29412 | + | 546 | Protein_37 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DNQ41_RS25055 () | 29448..29863 | - | 416 | Protein_38 | IS1 family transposase IS1R | Transposase |
| DNQ41_RS25070 () | 30112..30513 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| DNQ41_RS27755 () | 30446..30703 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| DNQ41_RS25075 () | 30796..31449 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| DNQ41_RS27920 () | 31547..31687 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| DNQ41_RS25085 () | 32387..33244 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| DNQ41_RS25090 () | 33237..33311 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| DNQ41_RS25100 () | 33549..33803 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| DNQ41_RS25105 () | 34043..34633 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| DNQ41_RS25110 () | 34671..34880 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| DNQ41_RS25115 () | 34926..35387 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| DNQ41_RS25120 () | 35632..35844 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| DNQ41_RS25125 () | 35973..36533 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| DNQ41_RS25130 () | 36636..37496 | - | 861 | WP_111530675.1 | putative protein YcjY | VF |
| DNQ41_RS25135 () | 37555..38301 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| DNQ41_RS25140 () | 38321..43591 | - | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| DNQ41_RS25145 () | 43591..45780 | - | 2190 | WP_017901267.1 | type IV conjugative transfer system coupling protein TraD | - |
| DNQ41_RS25150 () | 45831..46568 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| DNQ41_RS25155 () | 46771..47502 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| DNQ41_RS25160 () | 47551..48036 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| DNQ41_RS25165 () | 48052..50874 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DNQ41_RS25170 () | 50871..52244 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| DNQ41_RS25175 () | 52231..52656 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| DNQ41_RS25180 () | 52604..52951 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| DNQ41_RS25185 () | 52881..53426 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DNQ41_RS25190 () | 53413..53697 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DNQ41_RS25195 () | 53816..54160 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| DNQ41_RS25200 () | 54174..54917 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DNQ41_RS25205 () | 54910..55167 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| DNQ41_RS25210 () | 55194..57044 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DNQ41_RS25215 () | 57041..57679 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DNQ41_RS25220 () | 57688..57993 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| DNQ41_RS25225 () | 58023..59015 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| DNQ41_RS25230 () | 59012..59644 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| DNQ41_RS25235 () | 59641..60027 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| DNQ41_RS25240 () | 60024..62654 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| DNQ41_RS27760 () | 62780..63127 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| DNQ41_RS25250 () | 63155..63373 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| DNQ41_RS25255 () | 63453..63929 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| DNQ41_RS25260 () | 63922..64143 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| DNQ41_RS25265 () | 64278..64793 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DNQ41_RS25270 () | 64790..65158 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| DNQ41_RS25275 () | 65097..65684 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| DNQ41_RS25280 () | 65653..67104 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| DNQ41_RS25285 () | 67104..67832 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| DNQ41_RS25290 () | 67819..68385 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| DNQ41_RS25295 () | 68407..68718 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| DNQ41_RS25300 () | 68733..69092 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| DNQ41_RS25305 () | 69125..69352 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| DNQ41_RS25310 () | 69489..70160 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| DNQ41_RS25315 () | 70354..70737 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| DNQ41_RS25325 () | 71060..71662 | + | 603 | WP_000243713.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|