MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 67759 bp
Accession: NZ_CP029972 Location: 1..67759 Organism: Lentilactobacillus kefiri strain DH5 Replicon: plasmid pDH5
Accession: NZ_CP029972 Location: 1..67759 Organism: Lentilactobacillus kefiri strain DH5 Replicon: plasmid pDH5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DNL43_RS11615 () | 608..973 | - | 366 | WP_156645081.1 | hypothetical protein | - |
| DNL43_RS11620 () | 1471..2109 | + | 639 | WP_054769858.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| DNL43_RS11625 () | 2201..2695 | + | 495 | WP_054769859.1 | hypothetical protein | - |
| DNL43_RS11630 () | 3096..3413 | - | 318 | WP_095347951.1 | YfhO family protein | - |
| DNL43_RS11635 () | 3401..3871 | - | 471 | WP_095345103.1 | hypothetical protein | - |
| DNL43_RS11640 () | 4153..4952 | + | 800 | WP_179286864.1 | IS5 family transposase | - |
| DNL43_RS11645 () | 4972..5481 | + | 510 | WP_095347953.1 | TetR/AcrR family transcriptional regulator | - |
| DNL43_RS11650 () | 5550..6008 | - | 459 | Protein_8 | IS256 family transposase IS1310 | Transposase |
| DNL43_RS11655 () | 6392..6640 | + | 249 | WP_003606447.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| DNL43_RS11660 () | 6738..6902 | + | 165 | Protein_10 | D-alanyl-D-alanine carboxypeptidase | - |
| DNL43_RS11665 () | 6976..7863 | - | 888 | WP_095345064.1 | GRP family sugar transporter | - |
| DNL43_RS11670 () | 8058..8231 | - | 174 | Protein_12 | transposase | - |
| DNL43_RS11675 () | 8302..8981 | + | 680 | WP_095345065.1 | IS6 family transposase IS1297 | Transposase |
| DNL43_RS11680 () | 9262..9711 | - | 450 | WP_054769881.1 | cupin domain-containing protein | - |
| DNL43_RS11685 () | 10176..10553 | - | 378 | WP_054769880.1 | hypothetical protein | - |
| DNL43_RS11690 () | 10546..10866 | - | 321 | WP_054769879.1 | hypothetical protein | - |
| DNL43_RS11695 () | 10859..11128 | - | 270 | Protein_17 | excinuclease ABC subunit A | - |
| DNL43_RS11700 () | 11207..12271 | + | 1065 | WP_054769878.1 | ISL3 family transposase ISSpn3 | Transposase |
| DNL43_RS11705 () | 12256..12606 | - | 351 | Protein_19 | ISL3 family transposase IS1165 | Transposase |
| DNL43_RS11710 () | 12810..14159 | - | 1350 | WP_156645083.1 | FAD-dependent oxidoreductase | - |
| DNL43_RS11715 () | 14626..14715 | + | 90 | WP_021353390.1 | putative holin-like toxin | - |
| DNL43_RS11720 () | 14872..15051 | - | 180 | WP_109249237.1 | LtrC-like protein | - |
| DNL43_RS11725 () | 15108..17168 | - | 2061 | WP_054769790.1 | Mobilization protein A | Relaxase |
| DNL43_RS11730 () | 17421..17648 | + | 228 | WP_162551353.1 | hypothetical protein | - |
| DNL43_RS11735 () | 17671..17922 | + | 252 | Protein_25 | hypothetical protein | - |
| DNL43_RS11740 () | 18074..18814 | - | 741 | WP_054769789.1 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | VF |
| DNL43_RS11745 () | 19127..19537 | - | 411 | WP_054769788.1 | hypothetical protein | - |
| DNL43_RS11750 () | 19527..19808 | - | 282 | WP_054769787.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| DNL43_RS11755 () | 20059..21231 | - | 1173 | WP_156645085.1 | replication initiator protein A | - |
| DNL43_RS11760 () | 22154..23107 | + | 954 | WP_179286825.1 | AAA family ATPase | - |
| DNL43_RS11765 () | 23094..23372 | + | 279 | WP_057910342.1 | hypothetical protein | - |
| DNL43_RS11770 () | 23567..23878 | + | 312 | WP_081374765.1 | IS5 family transposase ISLpl3 | Transposase |
| DNL43_RS11775 () | 23810..24613 | - | 804 | WP_095345037.1 | AraC family transcriptional regulator | - |
| DNL43_RS11780 () | 24812..26776 | + | 1965 | WP_095345038.1 | PTS sugar transporter subunit IIA | - |
| DNL43_RS11785 () | 27029..30034 | - | 3006 | WP_095345039.1 | Tn3 family transposase TnBth1 | Transposase |
| DNL43_RS11790 () | 30213..30794 | + | 582 | WP_054769832.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| DNL43_RS11795 () | 30867..30968 | - | 102 | WP_095345041.1 | transposase | - |
| DNL43_RS11800 () | 30965..32044 | - | 1080 | WP_109249235.1 | ISL3 family transposase IS1165 | Transposase |
| DNL43_RS11810 () | 33014..33337 | - | 324 | WP_095345019.1 | hypothetical protein | - |
| DNL43_RS11815 () | 33594..34343 | - | 750 | WP_095345018.1 | DUF4430 domain-containing protein | - |
| DNL43_RS11820 () | 34378..35424 | - | 1047 | WP_095345017.1 | fucose-binding lectin II | - |
| DNL43_RS11825 () | 35512..37857 | - | 2346 | WP_095345016.1 | DUF4430 domain-containing protein | - |
| DNL43_RS11830 () | 38325..38786 | - | 462 | Protein_44 | ISLre2 family transposase ISLhe10 | Transposase |
| DNL43_RS11835 () | 39063..39959 | + | 897 | WP_095345015.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| DNL43_RS11840 () | 39947..41611 | + | 1665 | WP_095345014.1 | ATP-binding cassette domain-containing protein | - |
| DNL43_RS11845 () | 41619..42329 | + | 711 | WP_095345013.1 | ECF transporter S component | - |
| DNL43_RS11850 () | 42349..42552 | + | 204 | Protein_48 | fucose-binding lectin II | - |
| DNL43_RS11855 () | 42552..42758 | - | 207 | Protein_49 | ISL3 family transposase IS1165 | Transposase |
| DNL43_RS11860 () | 42982..43569 | + | 588 | WP_040168095.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| DNL43_RS11865 () | 44324..45913 | + | 1590 | WP_156645087.1 | asparagine synthase B | - |
| DNL43_RS11870 () | 46399..46764 | - | 366 | Protein_52 | IS3 family transposase IS153 | Transposase |
| DNL43_RS11880 () | 47816..48330 | - | 515 | Protein_54 | transposase | - |
| DNL43_RS11885 () | 48360..48539 | - | 180 | WP_156645091.1 | hypothetical protein | - |
| DNL43_RS11890 () | 48523..48876 | - | 354 | WP_046783642.1 | hypothetical protein | - |
| DNL43_RS11895 () | 49171..49724 | + | 554 | Protein_57 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| DNL43_RS11900 () | 50022..50809 | + | 788 | WP_156645093.1 | IS5 family transposase ISCARN82 | Transposase |
| DNL43_RS11905 () | 51277..51453 | - | 177 | WP_156645095.1 | hypothetical protein | - |
| DNL43_RS11910 () | 51453..51671 | - | 219 | WP_010579558.1 | hypothetical protein | - |
| DNL43_RS11920 () | 52806..53420 | - | 615 | Protein_62 | IS30 family transposase ISLpl1 | Transposase |
| DNL43_RS11925 () | 53612..55351 | + | 1740 | WP_003560513.1 | pyruvate oxidase | - |
| DNL43_RS11930 () | 55754..55996 | + | 243 | WP_003560515.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| DNL43_RS12135 () | 56014..56166 | + | 153 | WP_080467032.1 | hypothetical protein | - |
| DNL43_RS11935 () | 56354..56605 | + | 252 | WP_095347954.1 | IS3 family transposase IS153 | Transposase |
| DNL43_RS11940 () | 56659..57501 | + | 843 | WP_109249240.1 | IS3 family transposase ISBce13 | Transposase |
| DNL43_RS11945 () | 57626..57871 | - | 246 | Protein_68 | IS30 family transposase ISLsa1 | Transposase |
| DNL43_RS11950 () | 58057..58977 | + | 921 | WP_003646535.1 | prenyltransferase | - |
| DNL43_RS11955 () | 59090..59452 | + | 363 | WP_135294559.1 | IS5 family transposase ISCARN82 | Transposase |
| DNL43_RS11960 () | 59411..59757 | - | 347 | Protein_71 | IS5 family transposase ISStma16 | Transposase |
| DNL43_RS11965 () | 60067..61014 | + | 948 | WP_095347957.1 | magnesium transporter CorA family protein | - |
| DNL43_RS11970 () | 61118..61633 | - | 516 | WP_054769888.1 | dihydrofolate reductase family protein | - |
| DNL43_RS11975 () | 62126..62890 | + | 765 | WP_095347958.1 | ISNCY family transposase ISH7A | Transposase |
| DNL43_RS11980 () | 63035..63379 | - | 345 | WP_095347959.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| DNL43_RS11985 () | 63373..63636 | - | 264 | WP_001748109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DNL43_RS11990 () | 63954..64922 | + | 969 | WP_156645097.1 | IS30 family transposase IS1252 | Transposase |
| DNL43_RS11995 () | 64956..65312 | - | 357 | WP_002834562.1 | type II toxin-antitoxin system YafQ family toxin | - |
| DNL43_RS12000 () | 65312..65590 | - | 279 | WP_002834561.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| DNL43_RS12140 () | 66644..67153 | + | 510 | WP_179286863.1 | Mobilization protein MobB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|