MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93445 bp
Accession: NZ_CP029963 Location: 1..93445 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 343078_228140 Replicon: plasmid pK91
Accession: NZ_CP029963 Location: 1..93445 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 343078_228140 Replicon: plasmid pK91
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM228140_RS24440 () | 149..1009 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| SM228140_RS24445 () | 1192..1749 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| SM228140_RS24450 () | 1913..4918 | + | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| SM228140_RS24455 () | 4961..5976 | - | 1016 | Protein_3 | IS3 family transposase | - |
| SM228140_RS24460 () | 6371..7027 | + | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| SM228140_RS24465 () | 7346..7774 | - | 429 | Protein_5 | recombinase family protein | - |
| SM228140_RS24470 () | 7807..9198 | - | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| SM228140_RS24475 () | 9235..9807 | - | 573 | WP_001493762.1 | recombinase family protein | - |
| SM228140_RS24480 () | 9944..10534 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| SM228140_RS24485 () | 10641..11345 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SM228140_RS24495 () | 11406..12224 | + | 819 | Protein_10 | transposase | - |
| SM228140_RS24500 () | 12282..12524 | + | 243 | WP_000844627.1 | transposase | - |
| SM228140_RS24505 () | 12556..13191 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SM228140_RS24510 () | 13297..14496 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SM228140_RS24515 () | 14528..15412 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| SM228140_RS24520 () | 15550..15957 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| SM228140_RS24525 () | 15946..17697 | + | 1752 | Protein_16 | Tn3-like element TnAs1 family transposase | - |
| SM228140_RS24530 () | 17674..18372 | - | 699 | WP_123018154.1 | IS6 family transposase | - |
| SM228140_RS24535 () | 18433..19251 | + | 819 | Protein_18 | transposase | - |
| SM228140_RS24545 () | 19285..19530 | + | 246 | Protein_19 | IS3 family transposase | - |
| SM228140_RS24555 () | 20203..21711 | + | 1509 | WP_004017889.1 | group II intron reverse transcriptase/maturase | - |
| SM228140_RS24560 () | 21792..21971 | + | 180 | Protein_21 | DDE-type integrase/transposase/recombinase | - |
| SM228140_RS24570 () | 22253..23329 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| SM228140_RS24575 () | 23346..23624 | + | 279 | Protein_23 | IS3 family transposase | - |
| SM228140_RS24580 () | 23732..25777 | - | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| SM228140_RS24585 () | 25839..28496 | - | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| SM228140_RS24590 () | 28496..32125 | - | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| SM228140_RS24595 () | 32141..33904 | - | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| SM228140_RS24600 () | 33921..37598 | - | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| SM228140_RS24605 () | 37617..38201 | - | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| SM228140_RS24610 () | 38198..38797 | - | 600 | WP_001021938.1 | DUF1819 family protein | - |
| SM228140_RS24615 () | 38807..39733 | - | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| SM228140_RS24620 () | 39802..40119 | - | 318 | WP_032156934.1 | hypothetical protein | - |
| SM228140_RS24625 () | 40343..40522 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| SM228140_RS24630 () | 40554..41165 | - | 612 | Protein_34 | IS3 family transposase | - |
| SM228140_RS24640 () | 42361..43568 | + | 1208 | WP_089617520.1 | IS3 family transposase | - |
| SM228140_RS24645 () | 43595..43909 | - | 315 | Protein_36 | RepA protein | - |
| SM228140_RS24650 () | 44422..46140 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| SM228140_RS24655 () | 46137..46625 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| SM228140_RS24660 () | 46618..47601 | - | 984 | WP_064769770.1 | hypothetical protein | - |
| SM228140_RS24665 () | 47605..48519 | - | 915 | WP_000891983.1 | response regulator | - |
| SM228140_RS24670 () | 48833..49141 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| SM228140_RS24675 () | 49134..49349 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| SM228140_RS24680 () | 49352..50014 | + | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| SM228140_RS24685 () | 50025..50324 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| SM228140_RS24690 () | 50334..53084 | + | 2751 | WP_048659795.1 | VirB3 family type IV secretion system protein | - |
| SM228140_RS24695 () | 53103..53819 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| SM228140_RS24700 () | 53831..54115 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| SM228140_RS24705 () | 54133..55140 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| SM228140_RS25085 () | 55217..55357 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| SM228140_RS24710 () | 55350..56036 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| SM228140_RS24715 () | 56029..56922 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| SM228140_RS24720 () | 56919..58115 | + | 1197 | WP_000980841.1 | TrbI/VirB10 family protein | - |
| SM228140_RS24725 () | 58119..59168 | + | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| SM228140_RS24730 () | 59155..59556 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| SM228140_RS24735 () | 59647..59964 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| SM228140_RS24740 () | 59991..60326 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| SM228140_RS24745 () | 60302..60610 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| SM228140_RS24750 () | 60607..62808 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| SM228140_RS24755 () | 62805..63197 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| SM228140_RS24760 () | 63906..65813 | + | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| SM228140_RS24765 () | 65828..66574 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| SM228140_RS24770 () | 66567..67094 | + | 528 | WP_048659789.1 | phospholipase D family protein | - |
| SM228140_RS24775 () | 67126..67557 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| SM228140_RS25090 () | 67689..67865 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| SM228140_RS24780 () | 68037..69002 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| SM228140_RS24785 () | 69454..69879 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SM228140_RS24790 () | 69879..71150 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| SM228140_RS24795 () | 71229..71480 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| SM228140_RS24800 () | 71534..71839 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| SM228140_RS24815 () | 72529..73500 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| SM228140_RS24820 () | 73500..74666 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| SM228140_RS24825 () | 75407..76417 | + | 1011 | WP_000200069.1 | replication initiation protein | - |
| SM228140_RS24830 () | 76583..76996 | - | 414 | Protein_73 | Tn3 family transposase | - |
| SM228140_RS24835 () | 77175..78374 | - | 1200 | WP_000948429.1 | IS91 family transposase | - |
| SM228140_RS24840 () | 78384..78572 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| SM228140_RS24845 () | 78680..79345 | - | 666 | Protein_76 | IS5 family transposase | - |
| SM228140_RS24850 () | 79304..79501 | + | 198 | WP_048659784.1 | DUF4752 family protein | - |
| SM228140_RS24855 () | 79549..79788 | + | 240 | Protein_78 | hypothetical protein | - |
| SM228140_RS24860 () | 79924..80124 | + | 201 | WP_001408980.1 | hypothetical protein | - |
| SM228140_RS24865 () | 80127..80375 | + | 249 | WP_001286530.1 | DNA polymerase III subunit theta | - |
| SM228140_RS24870 () | 80487..80879 | + | 393 | WP_000506718.1 | hypothetical protein | - |
| SM228140_RS24875 () | 80952..81173 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SM228140_RS24880 () | 81173..81553 | + | 381 | WP_024166788.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| SM228140_RS24885 () | 81637..82437 | - | 801 | WP_001743161.1 | hypothetical protein | - |
| SM228140_RS24890 () | 82451..82945 | - | 495 | WP_048659776.1 | dUTP diphosphatase | - |
| SM228140_RS24895 () | 82938..83429 | - | 492 | WP_004010538.1 | hypothetical protein | - |
| SM228140_RS24900 () | 83426..83770 | - | 345 | WP_004010537.1 | hypothetical protein | - |
| SM228140_RS24905 () | 83843..84871 | - | 1029 | WP_048659775.1 | tyrosine-type recombinase/integrase | - |
| SM228140_RS24910 () | 85269..86306 | + | 1038 | WP_048659773.1 | hypothetical protein | - |
| SM228140_RS24915 () | 86334..87086 | - | 753 | Protein_90 | terminase | - |
| SM228140_RS24920 () | 87152..87856 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SM228140_RS24930 () | 87908..89674 | + | 1767 | Protein_92 | Tn3 family transposase | - |
| SM228140_RS24935 () | 89753..90757 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| SM228140_RS24940 () | 90939..91115 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| SM228140_RS24950 () | 91445..92260 | + | 816 | WP_004009399.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SM228140_RS24955 () | 92347..92589 | + | 243 | Protein_96 | phosphoglucosamine mutase | - |
| SM228140_RS24965 () | 92825..93445 | - | 621 | Protein_97 | IS91-like element ISVsa3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|