MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91891 bp
Accession: NZ_CP029869 Location: 1..91891 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 343077_215174 Replicon: plasmid pK91
Accession: NZ_CP029869 Location: 1..91891 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 343077_215174 Replicon: plasmid pK91
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM215174_RS24460 () | 1..246 | + | 246 | Protein_0 | IS3 family transposase | - |
| SM215174_RS24470 () | 919..2427 | + | 1509 | WP_004017889.1 | group II intron reverse transcriptase/maturase | - |
| SM215174_RS24475 () | 2508..2687 | + | 180 | Protein_2 | DDE-type integrase/transposase/recombinase | - |
| SM215174_RS24485 () | 2969..4045 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| SM215174_RS24490 () | 4062..4340 | + | 279 | Protein_4 | IS3 family transposase | - |
| SM215174_RS24495 () | 4448..6493 | - | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| SM215174_RS24500 () | 6555..9212 | - | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| SM215174_RS24505 () | 9212..12841 | - | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| SM215174_RS24510 () | 12857..14620 | - | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| SM215174_RS24515 () | 14637..18314 | - | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| SM215174_RS24520 () | 18333..18917 | - | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| SM215174_RS24525 () | 18914..19513 | - | 600 | WP_001021938.1 | DUF1819 family protein | - |
| SM215174_RS24530 () | 19523..20449 | - | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| SM215174_RS24535 () | 20518..20835 | - | 318 | WP_032156934.1 | hypothetical protein | - |
| SM215174_RS24540 () | 21059..21238 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| SM215174_RS24545 () | 21270..21881 | - | 612 | Protein_15 | IS3 family transposase | - |
| SM215174_RS24555 () | 23077..24284 | + | 1208 | WP_089617520.1 | IS3 family transposase | - |
| SM215174_RS24560 () | 24311..24625 | - | 315 | Protein_17 | RepA protein | - |
| SM215174_RS24565 () | 25138..26856 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| SM215174_RS24570 () | 26853..27341 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| SM215174_RS24575 () | 27334..28317 | - | 984 | WP_064769770.1 | hypothetical protein | - |
| SM215174_RS24580 () | 28321..29235 | - | 915 | WP_000891983.1 | response regulator | - |
| SM215174_RS24585 () | 29549..29857 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| SM215174_RS24590 () | 29850..30065 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| SM215174_RS24595 () | 30068..30730 | + | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| SM215174_RS24600 () | 30741..31040 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| SM215174_RS24605 () | 31050..33800 | + | 2751 | WP_048659795.1 | VirB3 family type IV secretion system protein | - |
| SM215174_RS24610 () | 33819..34535 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| SM215174_RS24615 () | 34547..34831 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| SM215174_RS24620 () | 34849..35856 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| SM215174_RS25080 () | 35933..36073 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| SM215174_RS24625 () | 36066..36752 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| SM215174_RS24630 () | 36745..37638 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| SM215174_RS24635 () | 37635..38831 | + | 1197 | WP_000980841.1 | TrbI/VirB10 family protein | - |
| SM215174_RS24640 () | 38835..39884 | + | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| SM215174_RS24645 () | 39871..40272 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| SM215174_RS24650 () | 40363..40680 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| SM215174_RS24655 () | 40707..41042 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| SM215174_RS24660 () | 41018..41326 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| SM215174_RS24665 () | 41323..43524 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| SM215174_RS24670 () | 43521..43913 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| SM215174_RS24675 () | 44622..46529 | + | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| SM215174_RS24680 () | 46544..47290 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| SM215174_RS24685 () | 47283..47810 | + | 528 | WP_048659789.1 | phospholipase D family protein | - |
| SM215174_RS24690 () | 47842..48273 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| SM215174_RS25085 () | 48405..48581 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| SM215174_RS24695 () | 48753..49718 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| SM215174_RS24700 () | 50170..50595 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SM215174_RS24705 () | 50595..51866 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| SM215174_RS24710 () | 51945..52196 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| SM215174_RS24715 () | 52250..52555 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| SM215174_RS24730 () | 53245..54216 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| SM215174_RS24735 () | 54216..55382 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| SM215174_RS24740 () | 56123..57133 | + | 1011 | WP_000200069.1 | replication initiation protein | - |
| SM215174_RS24745 () | 57299..57712 | - | 414 | Protein_54 | Tn3 family transposase | - |
| SM215174_RS24750 () | 57891..59090 | - | 1200 | WP_000948429.1 | IS91 family transposase | - |
| SM215174_RS24755 () | 59100..59288 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| SM215174_RS24760 () | 59396..60061 | - | 666 | Protein_57 | IS5 family transposase | - |
| SM215174_RS24765 () | 60020..60217 | + | 198 | WP_048659784.1 | DUF4752 family protein | - |
| SM215174_RS24770 () | 60265..60504 | + | 240 | Protein_59 | hypothetical protein | - |
| SM215174_RS24775 () | 60640..60840 | + | 201 | WP_001408980.1 | hypothetical protein | - |
| SM215174_RS24780 () | 60843..61091 | + | 249 | WP_001286530.1 | DNA polymerase III subunit theta | - |
| SM215174_RS24785 () | 61203..61595 | + | 393 | WP_000506718.1 | hypothetical protein | - |
| SM215174_RS24790 () | 61668..61889 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SM215174_RS24795 () | 61889..62269 | + | 381 | WP_024166788.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| SM215174_RS24800 () | 62353..63153 | - | 801 | WP_001743161.1 | hypothetical protein | - |
| SM215174_RS24805 () | 63167..63661 | - | 495 | WP_048659776.1 | dUTP diphosphatase | - |
| SM215174_RS24810 () | 63654..64145 | - | 492 | WP_004010538.1 | hypothetical protein | - |
| SM215174_RS24815 () | 64142..64486 | - | 345 | WP_004010537.1 | hypothetical protein | - |
| SM215174_RS24820 () | 64559..65587 | - | 1029 | WP_048659775.1 | tyrosine-type recombinase/integrase | - |
| SM215174_RS24825 () | 65985..67022 | + | 1038 | WP_048659773.1 | hypothetical protein | - |
| SM215174_RS24830 () | 67050..67802 | - | 753 | Protein_71 | terminase | - |
| SM215174_RS24835 () | 67868..68572 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SM215174_RS24840 () | 68679..69269 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| SM215174_RS24845 () | 69406..69978 | + | 573 | WP_001493762.1 | recombinase family protein | - |
| SM215174_RS24850 () | 70015..71406 | + | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| SM215174_RS24855 () | 71439..71867 | + | 429 | Protein_76 | recombinase family protein | - |
| SM215174_RS24860 () | 72186..72842 | - | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| SM215174_RS24865 () | 73237..74252 | + | 1016 | Protein_78 | IS3 family transposase | - |
| SM215174_RS24870 () | 74295..77300 | - | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| SM215174_RS24875 () | 77464..78021 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| SM215174_RS24880 () | 78204..79064 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| SM215174_RS24885 () | 79213..79833 | + | 621 | Protein_82 | IS91-like element ISVsa3 family transposase | - |
| SM215174_RS24895 () | 80069..80311 | - | 243 | Protein_83 | phosphoglucosamine mutase | - |
| SM215174_RS24900 () | 80398..81213 | - | 816 | WP_004009399.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SM215174_RS24910 () | 81543..81719 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| SM215174_RS24915 () | 81901..82905 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| SM215174_RS24920 () | 82984..84750 | - | 1767 | Protein_87 | Tn3 family transposase | - |
| SM215174_RS24930 () | 84802..85506 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SM215174_RS24940 () | 85567..86385 | + | 819 | Protein_89 | transposase | - |
| SM215174_RS24945 () | 86443..86685 | + | 243 | WP_000844627.1 | transposase | - |
| SM215174_RS24950 () | 86717..87352 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SM215174_RS24955 () | 87458..88657 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SM215174_RS24960 () | 88689..89573 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| SM215174_RS24965 () | 89711..90118 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| SM215174_RS24970 () | 90107..91858 | + | 1752 | Protein_95 | Tn3-like element TnAs1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|