MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93798 bp
Accession: NZ_CP029838 Location: 1..93798 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 10ST07093 Replicon: plasmid p10ST07093B
Accession: NZ_CP029838 Location: 1..93798 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 10ST07093 Replicon: plasmid p10ST07093B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DM286_RS00610 () | 259..645 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| DM286_RS00615 () | 620..3268 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| DM286_RS00620 () | 3284..3547 | - | 264 | WP_001239255.1 | hypothetical protein | - |
| DM286_RS00625 () | 3664..4131 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| DM286_RS00630 () | 4124..4345 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| DM286_RS00635 () | 4480..4995 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DM286_RS00640 () | 4992..5237 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| DM286_RS00645 () | 5215..5811 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| DM286_RS00650 () | 5801..7222 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| DM286_RS00655 () | 7222..7962 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| DM286_RS00660 () | 7949..8515 | - | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| DM286_RS00665 () | 8537..8848 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| DM286_RS00670 () | 8863..9225 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| DM286_RS00675 () | 9267..9494 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| DM286_RS00680 () | 9588..10274 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| DM286_RS00685 () | 10467..10847 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| DM286_RS00695 () | 11262..11732 | + | 471 | WP_014344446.1 | transglycosylase SLT domain-containing protein | - |
| DM286_RS25040 () | 12043..12861 | - | 819 | Protein_18 | DUF945 domain-containing protein | - |
| DM286_RS25045 () | 12964..13122 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| DM286_RS00710 () | 13371..14108 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| DM286_RS00715 () | 14105..14539 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| DM286_RS00720 () | 14579..16576 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| DM286_RS00725 () | 16645..16887 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| DM286_RS00730 () | 16942..17460 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| DM286_RS25050 () | 18054..18221 | - | 168 | WP_154074060.1 | hypothetical protein | - |
| DM286_RS00740 () | 18185..18508 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| DM286_RS00745 () | 18744..19178 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| DM286_RS00750 () | 19245..19679 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| DM286_RS00760 () | 20175..20939 | - | 765 | WP_001246548.1 | membrane protein | - |
| DM286_RS00765 () | 21011..21424 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| DM286_RS00770 () | 21480..21701 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| DM286_RS00775 () | 21701..22381 | - | 681 | WP_000088645.1 | DNA methylase | - |
| DM286_RS00785 () | 22763..23119 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| DM286_RS00790 () | 23112..23582 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| DM286_RS00795 () | 24093..24515 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DM286_RS00800 () | 24515..25789 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| DM286_RS00805 () | 25871..26845 | - | 975 | WP_000064272.1 | ParB/RepB/Spo0J family partition protein | - |
| DM286_RS00810 () | 26845..28050 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| DM286_RS00815 () | 28465..29406 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DM286_RS00820 () | 29438..30004 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| DM286_RS00825 () | 30061..30396 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| DM286_RS00830 () | 30580..30996 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| DM286_RS00835 () | 31082..32197 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| DM286_RS00840 () | 32456..32944 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| DM286_RS00850 () | 33599..34339 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| DM286_RS00855 () | 34546..35106 | + | 561 | WP_001738679.1 | recombinase family protein | - |
| DM286_RS00860 () | 35090..36754 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| DM286_RS00865 () | 36687..37712 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| DM286_RS00870 () | 37901..38938 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| DM286_RS25055 () | 39464..39576 | + | 113 | Protein_50 | transcriptional activator | - |
| DM286_RS00880 () | 40614..40778 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| DM286_RS00885 () | 40952..41719 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| DM286_RS25060 () | 41682..41849 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| DM286_RS00890 () | 41901..43676 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| DM286_RS00895 () | 43957..44682 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| DM286_RS00900 () | 44943..45593 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| DM286_RS00905 () | 45720..46144 | - | 425 | Protein_57 | IS200/IS605 family transposase | - |
| DM286_RS00910 () | 46201..46551 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| DM286_RS00915 () | 46618..47178 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| DM286_RS00925 () | 47907..48392 | - | 486 | WP_000905606.1 | membrane protein | - |
| DM286_RS00930 () | 48386..48895 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| DM286_RS00940 () | 48899..49612 | - | 714 | Protein_62 | EAL domain-containing protein | - |
| DM286_RS00945 () | 49621..50403 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| DM286_RS00950 () | 50438..50959 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| DM286_RS00955 () | 50956..51246 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| DM286_RS00960 () | 51248..51553 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DM286_RS00965 () | 51555..51773 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DM286_RS00970 () | 52449..52970 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| DM286_RS00980 () | 53454..53750 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| DM286_RS00985 () | 54244..55233 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| DM286_RS00990 () | 55492..55936 | - | 445 | Protein_71 | site-specific integrase | - |
| DM286_RS00995 () | 56105..56486 | - | 382 | Protein_72 | YgiW/YdeI family stress tolerance OB fold protein | - |
| DM286_RS01005 () | 57205..57507 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| DM286_RS01010 () | 57782..58300 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| DM286_RS01015 () | 58528..60936 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| DM286_RS01020 () | 60929..61621 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| DM286_RS01025 () | 61636..62193 | + | 558 | WP_010999940.1 | membrane protein | - |
| DM286_RS01030 () | 62446..63321 | + | 876 | WP_014343944.1 | hypothetical protein | - |
| DM286_RS01035 () | 63753..63965 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| DM286_RS01040 () | 63950..64300 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| DM286_RS01045 () | 64545..65198 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| DM286_RS25065 () | 65188..65334 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| DM286_RS01050 () | 65331..66229 | + | 899 | Protein_83 | YjiK family protein | - |
| DM286_RS01055 () | 66319..66876 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| DM286_RS01060 () | 67143..67901 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| DM286_RS01065 () | 67998..68176 | - | 179 | Protein_86 | YjiK family protein | - |
| DM286_RS01075 () | 69078..69959 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| DM286_RS01080 () | 69940..70017 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| DM286_RS01085 () | 70267..70533 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| DM286_RS01095 () | 70712..71154 | - | 443 | Protein_90 | phospholipase | - |
| DM286_RS01100 () | 71320..71475 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| DM286_RS01105 () | 71488..71772 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| DM286_RS01110 () | 71887..72450 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| DM286_RS01115 () | 72505..73245 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| DM286_RS01120 () | 73265..78523 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| DM286_RS01125 () | 78605..78832 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| DM286_RS01130 () | 78832..79230 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DM286_RS01135 () | 79239..81401 | - | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| DM286_RS01140 () | 81778..82509 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| DM286_RS01145 () | 82545..83039 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| DM286_RS01150 () | 83055..85877 | - | 2823 | WP_001007087.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DM286_RS01155 () | 85874..87256 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| DM286_RS01160 () | 87246..87794 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DM286_RS01165 () | 87781..88074 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DM286_RS01170 () | 88288..89037 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DM286_RS01175 () | 89049..89264 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| DM286_RS01180 () | 89275..91101 | - | 1827 | WP_000827529.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DM286_RS01185 () | 91098..91517 | - | 420 | WP_001229397.1 | HNH endonuclease | - |
| DM286_RS01190 () | 91554..92192 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DM286_RS01195 () | 92177..92485 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| DM286_RS01200 () | 92504..93496 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| DM286_RS25070 () | 93493..93792 | - | 300 | WP_077908765.1 | type-F conjugative transfer system protein TraW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|