MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36270 bp
Accession: NZ_CP029792 Location: 1..36270 Organism: Psychrobacter sp. YP14 Replicon: plasmid pYP14c
Accession: NZ_CP029792 Location: 1..36270 Organism: Psychrobacter sp. YP14 Replicon: plasmid pYP14c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLE54_RS12075 () | 149..349 | - | 201 | Protein_1 | heme lyase NrfEFG subunit NrfE | - |
| DLE54_RS11795 () | 467..2660 | - | 2194 | Protein_2 | heavy metal translocating P-type ATPase | - |
| DLE54_RS11800 () | 2803..3213 | + | 411 | WP_007394845.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| DLE54_RS11805 () | 3406..4158 | + | 753 | WP_011959606.1 | IS5 family transposase ISAba31 | Transposase |
| DLE54_RS11810 () | 4604..5605 | + | 1002 | WP_197708954.1 | cation diffusion facilitator family transporter | - |
| DLE54_RS11815 () | 5722..6444 | - | 723 | WP_068405068.1 | CHAP domain-containing protein | - |
| DLE54_RS11820 () | 7241..7885 | - | 645 | WP_007394850.1 | metal-binding protein | - |
| DLE54_RS11825 () | 8125..9693 | + | 1569 | WP_077451561.1 | apolipoprotein N-acyltransferase | - |
| DLE54_RS11830 () | 9834..11058 | - | 1225 | Protein_9 | IS3 family transposase ISPar1 | Transposase |
| DLE54_RS11835 () | 11111..11389 | - | 279 | WP_110817426.1 | hypothetical protein | - |
| DLE54_RS11840 () | 11506..11883 | - | 378 | WP_110817427.1 | hypothetical protein | - |
| DLE54_RS11845 () | 11996..15097 | - | 3102 | WP_110817428.1 | type I restriction endonuclease subunit R | - |
| DLE54_RS11850 () | 15090..16295 | - | 1206 | WP_110817429.1 | restriction endonuclease subunit S | - |
| DLE54_RS11855 () | 16292..17833 | - | 1542 | WP_110817430.1 | type I restriction-modification system subunit M | - |
| DLE54_RS11860 () | 17899..18351 | - | 453 | WP_110817431.1 | hypothetical protein | - |
| DLE54_RS11865 () | 18639..20768 | + | 2130 | WP_110817432.1 | Mobilization protein A | Relaxase |
| DLE54_RS11870 () | 21138..22385 | + | 1248 | WP_110817433.1 | replication initiation protein | - |
| DLE54_RS11875 () | 22606..23811 | + | 1206 | Protein_18 | IS256 family transposase | - |
| DLE54_RS11880 () | 23799..24137 | + | 339 | Protein_19 | IS3 family transposase ISAba19 | Transposase |
| DLE54_RS11885 () | 24322..24711 | - | 390 | WP_110817434.1 | hypothetical protein | - |
| DLE54_RS11890 () | 25029..25781 | - | 753 | WP_110817435.1 | hypothetical protein | - |
| DLE54_RS11895 () | 26125..26565 | + | 441 | WP_110817436.1 | hypothetical protein | - |
| DLE54_RS11900 () | 27007..27465 | - | 459 | WP_025651570.1 | DIP1984 family protein | - |
| DLE54_RS11905 () | 27514..27819 | + | 306 | WP_162617755.1 | IS3 family transposase ISAba29 | Transposase |
| DLE54_RS11910 () | 28138..28566 | - | 429 | WP_110817438.1 | hypothetical protein | - |
| DLE54_RS11915 () | 28837..29256 | + | 420 | WP_110817439.1 | PPC domain-containing protein | - |
| DLE54_RS11920 () | 29366..30049 | - | 684 | WP_110817440.1 | DUF421 domain-containing protein | - |
| DLE54_RS11925 () | 30327..30530 | + | 204 | WP_044298583.1 | CsbD family protein | - |
| DLE54_RS11930 () | 31031..31597 | + | 567 | WP_110817441.1 | plasmid replication DNA-binding protein | - |
| DLE54_RS11935 () | 31726..32073 | + | 348 | WP_110817442.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DLE54_RS11940 () | 32075..32377 | + | 303 | WP_011954794.1 | XRE family transcriptional regulator | Antitoxin Detail |
| DLE54_RS11945 () | 32392..33024 | - | 633 | WP_110817443.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| DLE54_RS11950 () | 33400..33693 | - | 294 | WP_110817444.1 | DUF3817 domain-containing protein | - |
| DLE54_RS11955 () | 34144..34851 | - | 708 | WP_075107731.1 | Lipoprotein signal peptidase | VF |
| DLE54_RS11960 () | 35008..35649 | - | 642 | WP_110817445.1 | IS1595 family transposase ISPssp3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|