MGE detailed information
MGE type: Conjugative plasmid MGE length: 117192 bp
Accession: NZ_CP029744 Location: 1..117192 Organism: Escherichia coli strain AR_0085 Replicon: plasmid unnamed3
Accession: NZ_CP029744 Location: 1..117192 Organism: Escherichia coli strain AR_0085 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM464_RS28925 () | 89..820 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| AM464_RS28930 () | 845..1366 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| AM464_RS28935 () | 1399..4215 | - | 2817 | WP_001007054.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM464_RS28940 () | 4212..5585 | - | 1374 | WP_021553026.1 | conjugal transfer protein TraH | - |
| AM464_RS28945 () | 5585..5999 | - | 415 | Protein_4 | F-type conjugal transfer protein TrbF | - |
| AM464_RS28950 () | 5953..6294 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| AM464_RS28955 () | 6224..6769 | - | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM464_RS28960 () | 6756..7040 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM464_RS28965 () | 7121..7435 | + | 315 | WP_000415567.1 | hypothetical protein | - |
| AM464_RS28970 () | 7437..7784 | - | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| AM464_RS28975 () | 7800..8543 | - | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM464_RS28980 () | 8536..8793 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| AM464_RS28985 () | 8820..10628 | - | 1809 | WP_000821847.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM464_RS28990 () | 10625..11263 | - | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM464_RS28995 () | 11272..12264 | - | 993 | WP_000830187.1 | conjugal transfer pilus assembly protein TraU | - |
| AM464_RS29000 () | 12261..12893 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| AM464_RS29005 () | 12890..13276 | - | 387 | WP_000097319.1 | type-F conjugative transfer system protein TrbI | - |
| AM464_RS29010 () | 13273..15900 | - | 2628 | WP_001064247.1 | type IV secretion system protein TraC | - |
| AM464_RS29015 () | 16060..16281 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| AM464_RS29020 () | 16416..16931 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM464_RS29025 () | 16928..17179 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| AM464_RS29030 () | 17191..17421 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| AM464_RS29035 () | 17375..17965 | - | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| AM464_RS29040 () | 17955..19382 | - | 1428 | WP_000146692.1 | conjugal transfer protein TraB | - |
| AM464_RS29045 () | 19382..20086 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AM464_RS29050 () | 20097..20663 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| AM464_RS29055 () | 20685..20996 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AM464_RS29060 () | 21011..21376 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| AM464_RS29065 () | 21409..21804 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| AM464_RS29070 () | 21903..22592 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| AM464_RS29075 () | 22779..23162 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| AM464_RS29080 () | 23483..24085 | + | 603 | WP_000243709.1 | hypothetical protein | VF |
| AM464_RS29085 () | 24382..25203 | - | 822 | WP_001234471.1 | DUF945 domain-containing protein | - |
| AM464_RS29090 () | 25324..25611 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| AM464_RS30385 () | 25636..25842 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| AM464_RS30165 () | 25955..26179 | + | 225 | WP_077248521.1 | hypothetical protein | - |
| AM464_RS29110 () | 26533..26691 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 26735..26959 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26735..26959 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26735..26959 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26735..26959 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| AM464_RS30170 () | 26771..26959 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| AM464_RS29115 () | 26971..27690 | - | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| AM464_RS29120 () | 27687..28121 | - | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| AM464_RS29125 () | 28176..30134 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| AM464_RS29130 () | 30193..30426 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| AM464_RS29135 () | 30482..31009 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| AM464_RS29150 () | 31354..31578 | + | 225 | WP_001340580.1 | hypothetical protein | - |
| AM464_RS29165 () | 31888..32451 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| AM464_RS29170 () | 32497..33858 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| AM464_RS29175 () | 33910..34140 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| AM464_RS30390 () | 34818..35146 | + | 329 | Protein_47 | pilus assembly protein | - |
| AM464_RS29195 () | 35134..35316 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| AM464_RS29200 () | 35316..35777 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| AM464_RS29205 () | 35777..36079 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| AM464_RS29215 () | 36604..37575 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| AM464_RS29220 () | 37628..38325 | - | 698 | Protein_52 | IS1 family transposase IS1S | Transposase |
| AM464_RS29230 () | 38379..38711 | - | 333 | Protein_53 | hypothetical protein | - |
| AM464_RS30395 () | 38780..39118 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| AM464_RS29245 () | 39887..40858 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AM464_RS29250 () | 40858..42024 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| AM464_RS29255 () | 42324..43021 | - | 698 | Protein_57 | IS1 family transposase | - |
| AM464_RS29265 () | 43177..44679 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| AM464_RS29270 () | 45299..45748 | - | 450 | WP_000238252.1 | hypothetical protein | - |
| AM464_RS29275 () | 45866..46345 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| AM464_RS29285 () | 46785..47012 | + | 228 | Protein_61 | malate dehydrogenase | - |
| AM464_RS29290 () | 47009..47140 | - | 132 | Protein_62 | phosphopyruvate hydratase | - |
| AM464_RS29295 () | 47138..47395 | + | 258 | Protein_63 | Tn3 family transposase | - |
| AM464_RS29300 () | 47629..48486 | - | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| AM464_RS29305 () | 48483..49340 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| AM464_RS29310 () | 49337..50164 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| AM464_RS29315 () | 50164..51078 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| AM464_RS29330 () | 51434..52131 | + | 698 | Protein_68 | IS1 family transposase IS1S | Transposase |
| AM464_RS29335 () | 52311..52824 | - | 514 | Protein_69 | DUF4113 domain-containing protein | - |
| AM464_RS30400 () | 52885..52989 | - | 105 | Protein_70 | AAA family ATPase | - |
| AM464_RS29345 () | 52991..53314 | - | 324 | Protein_71 | IS21 family transposase IS21 | Transposase |
| AM464_RS29355 () | 54060..55037 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| AM464_RS29360 () | 55322..56062 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| AM464_RS29365 () | 56183..56371 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| AM464_RS29370 () | 56745..57647 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| AM464_RS29375 () | 57716..58825 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| AM464_RS29385 () | 59258..60211 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| AM464_RS29390 () | 60315..60704 | + | 390 | WP_001332050.1 | IS110 family transposase ISEc20 | Transposase |
| AM464_RS29400 () | 61484..61642 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| AM464_RS29405 () | 61826..62565 | + | 740 | Protein_80 | IS3 family transposase IS629 | Transposase |
| AM464_RS29415 () | 63238..64746 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| AM464_RS29420 () | 64836..65309 | + | 474 | Protein_82 | IS3 family transposase IS629 | Transposase |
| AM464_RS29425 () | 65457..65725 | - | 269 | Protein_83 | IS3 family transposase ISLad1 | Transposase |
| AM464_RS29435 () | 65782..66479 | + | 698 | Protein_84 | IS1 family transposase IS1S | Transposase |
| AM464_RS29445 () | 67582..68697 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| AM464_RS29450 () | 68837..72496 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| AM464_RS29455 () | 72600..73829 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| AM464_RS29460 () | 73914..74870 | + | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| AM464_RS29465 () | 74915..77092 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| AM464_RS29480 () | 77947..78735 | - | 789 | Protein_90 | 3-deoxy-7-phosphoheptulonate synthase | - |
| AM464_RS29485 () | 78883..79863 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| AM464_RS29495 () | 79932..80663 | + | 732 | Protein_92 | Putative multidrug export ATP-binding/permease protein | VF |
| AM464_RS29500 () | 80833..81144 | - | 312 | WP_001259758.1 | colicin V | - |
| AM464_RS30180 () | 81122..81358 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| AM464_RS29510 () | 81577..82281 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM464_RS29520 () | 82612..83817 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| AM464_RS29525 () | 84261..84581 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| AM464_RS29530 () | 84574..84960 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| AM464_RS29535 () | 84968..85102 | + | 135 | Protein_99 | transcriptional regulator | - |
| AM464_RS29540 () | 85250..86230 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| AM464_RS29550 () | 86449..86853 | + | 405 | WP_000512977.1 | hypothetical protein | - |
| AM464_RS29555 () | 86831..87454 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| AM464_RS29560 () | 87536..88741 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| AM464_RS29565 () | 88854..89447 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| AM464_RS29575 () | 89677..90645 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| AM464_RS29580 () | 90678..91004 | + | 327 | Protein_106 | IS91 family transposase ISSod25 | Transposase |
| AM464_RS29585 () | 91182..91535 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| AM464_RS29590 () | 91585..92400 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| AM464_RS29600 () | 92644..92988 | + | 345 | Protein_109 | colicin B immunity protein | - |
| AM464_RS29605 () | 93041..93745 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| AM464_RS29610 () | 93809..94279 | + | 471 | Protein_111 | 3'-kinase | - |
| AM464_RS29615 () | 94253..97240 | - | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| AM464_RS29620 () | 97408..97812 | + | 405 | Protein_113 | recombinase family protein | - |
| AM464_RS29625 () | 97940..99073 | - | 1134 | WP_001089730.1 | permease | - |
| AM464_RS29630 () | 99179..99502 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| AM464_RS29640 () | 99604..100301 | + | 698 | Protein_116 | IS1 family transposase IS1G | Transposase |
| AM464_RS29650 () | 100624..100860 | - | 237 | Protein_117 | transposase | - |
| AM464_RS29655 () | 100982..101464 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| AM464_RS29660 () | 101581..102429 | - | 849 | WP_001058012.1 | 3'-5' exonuclease | - |
| AM464_RS29665 () | 102475..102756 | - | 282 | WP_000969983.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM464_RS29670 () | 102753..103022 | - | 270 | WP_000079943.1 | hypothetical protein | - |
| AM464_RS30185 () | 103077..103235 | - | 159 | WP_162617002.1 | hypothetical protein | - |
| AM464_RS29690 () | 103939..104796 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| AM464_RS29695 () | 104789..104863 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AM464_RS29705 () | 105089..105349 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| AM464_RS29710 () | 105588..106161 | - | 574 | Protein_126 | DUF2726 domain-containing protein | - |
| AM464_RS29715 () | 106199..106408 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| AM464_RS29720 () | 106454..106915 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| AM464_RS29725 () | 107158..107370 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| AM464_RS29730 () | 107508..108068 | - | 561 | WP_000139360.1 | fertility inhibition protein FinO | - |
| AM464_RS29735 () | 108123..108869 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| AM464_RS29740 () | 108889..114159 | - | 5271 | WP_011117356.1 | Multifunctional conjugation protein TraI | Relaxase |
| AM464_RS29745 () | 114241..114468 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | - |
| AM464_RS29750 () | 114468..114866 | + | 399 | WP_000911324.1 | tRNA(fMet)-specific endonuclease VapC | - |
| AM464_RS29755 () | 114875..117028 | - | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|