MGE detailed information
MGE type: Conjugative plasmid MGE length: 76953 bp
Accession: NZ_CP029734 Location: 1..76953 Organism: Citrobacter sp. CRE-46 strain AR_0157 Replicon: plasmid unnamed6
Accession: NZ_CP029734 Location: 1..76953 Organism: Citrobacter sp. CRE-46 strain AR_0157 Replicon: plasmid unnamed6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN232_RS30380 () | 1011..1739 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| AN232_RS30385 () | 1726..2292 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| AN232_RS30390 () | 2314..2625 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| AN232_RS30395 () | 2640..2999 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| AN232_RS30400 () | 3032..3259 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| AN232_RS30405 () | 3396..4067 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| AN232_RS30410 () | 4261..4644 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| AN232_RS30420 () | 4967..5569 | + | 603 | WP_000243713.1 | hypothetical protein | VF |
| AN232_RS30425 () | 5866..6687 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| AN232_RS30430 () | 6798..7094 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| AN232_RS31905 () | 7394..7771 | + | 378 | Protein_11 | hypothetical protein | - |
| AN232_RS31700 () | 8009..8167 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 8211..8435 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 8211..8435 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 8211..8435 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 8211..8435 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| AN232_RS30455 () | 8447..9166 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| AN232_RS30460 () | 9163..9597 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| AN232_RS30465 () | 9666..11630 | - | 1965 | WP_063131970.1 | ParB/RepB/Spo0J family partition protein | - |
| AN232_RS30470 () | 11691..11924 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| AN232_RS30475 () | 11982..12509 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| AN232_RS30495 () | 13358..13921 | - | 564 | WP_110498948.1 | class I SAM-dependent methyltransferase | - |
| AN232_RS30500 () | 13968..15329 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| AN232_RS30505 () | 15381..15611 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| AN232_RS30525 () | 16649..16840 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| AN232_RS30530 () | 16837..17259 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| AN232_RS30535 () | 17306..17731 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| AN232_RS31910 () | 18149..18925 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| AN232_RS30550 () | 18976..19410 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| AN232_RS30555 () | 19424..19645 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| AN232_RS30560 () | 19646..20329 | - | 684 | WP_000085883.1 | DNA methylase | - |
| AN232_RS30565 () | 20406..20699 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| AN232_RS30570 () | 20846..21808 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| AN232_RS30575 () | 21811..22161 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| AN232_RS30580 () | 22284..22565 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| AN232_RS30585 () | 22693..22927 | - | 235 | Protein_32 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AN232_RS31915 () | 24376..24441 | - | 66 | Protein_33 | IS1 family transposase | - |
| AN232_RS30605 () | 24507..25211 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| AN232_RS30610 () | 25265..25351 | + | 87 | Protein_35 | helix-turn-helix domain-containing protein | - |
| AN232_RS30615 () | 25354..27825 | + | 2472 | Protein_36 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| AN232_RS30620 () | 27972..28832 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| AN232_RS30625 () | 29015..29572 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AN232_RS30635 () | 29874..30638 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| AN232_RS30650 () | 31131..31715 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| AN232_RS30655 () | 31715..32953 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| AN232_RS30660 () | 32950..33864 | - | 915 | WP_110498949.1 | hypothetical protein | ARG |
| AN232_RS30670 () | 33986..34690 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AN232_RS30675 () | 34825..34920 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| AN232_RS30680 () | 35046..35783 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| AN232_RS31920 () | 35728..35898 | + | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| AN232_RS30690 () | 36413..36862 | + | 450 | WP_013362817.1 | hypothetical protein | - |
| AN232_RS31925 () | 36823..37164 | + | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| AN232_RS30700 () | 37391..38872 | + | 1482 | WP_024210412.1 | IS91 family transposase ISVsa3 | Transposase |
| AN232_RS30705 () | 38884..39588 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AN232_RS30710 () | 39654..40199 | + | 546 | Protein_51 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AN232_RS30715 () | 40235..40650 | - | 416 | Protein_52 | IS1 family transposase IS1R | Transposase |
| AN232_RS30730 () | 40899..41300 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AN232_RS31705 () | 41233..41490 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AN232_RS30735 () | 41583..42236 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AN232_RS30745 () | 43175..44032 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| AN232_RS30750 () | 44025..44099 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AN232_RS30760 () | 44337..44591 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| AN232_RS30765 () | 44831..45421 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| AN232_RS30770 () | 45459..45668 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AN232_RS30775 () | 45714..46175 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AN232_RS30780 () | 46420..46632 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AN232_RS30785 () | 46761..47321 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| AN232_RS30790 () | 47424..48284 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AN232_RS30795 () | 48343..49089 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AN232_RS30800 () | 49109..54379 | - | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| AN232_RS30805 () | 54379..56640 | - | 2262 | WP_046072940.1 | type IV conjugative transfer system coupling protein TraD | - |
| AN232_RS30810 () | 56691..57428 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| AN232_RS30815 () | 57631..58362 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AN232_RS30820 () | 58411..58896 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| AN232_RS30825 () | 58912..61734 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AN232_RS30830 () | 61731..63104 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| AN232_RS30835 () | 63091..63516 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| AN232_RS30840 () | 63464..63811 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AN232_RS30845 () | 63741..64286 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AN232_RS30850 () | 64273..64557 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AN232_RS30855 () | 64676..65020 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| AN232_RS30860 () | 65034..65777 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AN232_RS30865 () | 65770..66027 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| AN232_RS30870 () | 66054..67904 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AN232_RS30875 () | 67901..68539 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AN232_RS30880 () | 68548..68853 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| AN232_RS30885 () | 68883..69875 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| AN232_RS30890 () | 69872..70504 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| AN232_RS30895 () | 70501..70887 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| AN232_RS30900 () | 70884..73514 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| AN232_RS30905 () | 73640..73987 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| AN232_RS30910 () | 74015..74233 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| AN232_RS30915 () | 74313..74789 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| AN232_RS30920 () | 74782..75003 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| AN232_RS30925 () | 75138..75653 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AN232_RS30930 () | 75650..76018 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| AN232_RS30935 () | 75957..76544 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|