MGE detailed information
MGE type: Genomic_island MGE length: 28168 bp
Accession: NZ_CP029693 Location: 4498562..4526729 Organism: Pseudomonas putida strain JBC17 Replicon: chromosome
Accession: NZ_CP029693 Location: 4498562..4526729 Organism: Pseudomonas putida strain JBC17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKY63_RS21080 () | 4493872..4494312 | - | 441 | WP_110965853.1 | Lrp/AsnC family transcriptional regulator | - |
| DKY63_RS21085 () | 4494452..4497499 | + | 3048 | WP_110965854.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| DKY63_RS21090 () | 4497710..4498498 | + | 789 | WP_110965855.1 | ABC transporter substrate-binding protein | - |
| DKY63_RS21095 () | 4498562..4499209 | + | 648 | WP_110965856.1 | amino acid ABC transporter permease | - |
| DKY63_RS21100 () | 4499220..4499879 | + | 660 | WP_110965857.1 | amino acid ABC transporter permease | - |
| DKY63_RS21105 () | 4499894..4500643 | + | 750 | WP_204354366.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DKY63_RS21110 () | 4500708..4501697 | - | 990 | WP_110965859.1 | Abi family protein | - |
| DKY63_RS32415 () | 4501808..4503037 | + | 1230 | WP_110965860.1 | hypothetical protein ; Integrase | Integrase |
| DKY63_RS21120 () | 4503028..4503591 | + | 564 | WP_110965861.1 | hypothetical protein | - |
| DKY63_RS21125 () | 4503765..4504049 | + | 285 | WP_110967957.1 | helix-turn-helix domain-containing protein | - |
| DKY63_RS21130 () | 4504105..4504422 | + | 318 | WP_110965862.1 | hypothetical protein | - |
| DKY63_RS21135 () | 4504425..4505294 | + | 870 | WP_110965863.1 | toprim domain-containing protein | - |
| DKY63_RS21140 () | 4505348..4506526 | + | 1179 | WP_110967958.1 | AAA family ATPase | - |
| DKY63_RS21150 () | 4507212..4507721 | - | 510 | WP_110965864.1 | hypothetical protein | - |
| DKY63_RS21155 () | 4507731..4509293 | - | 1563 | WP_162634914.1 | hypothetical protein | - |
| DKY63_RS21160 () | 4509792..4510106 | - | 315 | Protein_4036 | IS3 family transposase ISPsy24 | Transposase |
| DKY63_RS21165 () | 4510386..4510856 | + | 471 | WP_110965866.1 | hypothetical protein | - |
| DKY63_RS32195 () | 4511114..4511311 | - | 198 | WP_162634915.1 | hypothetical protein | - |
| DKY63_RS21170 () | 4511331..4512197 | - | 867 | WP_110965867.1 | serine dehydrogenasease | - |
| DKY63_RS21175 () | 4512713..4513357 | - | 645 | WP_110965868.1 | RloB family protein | - |
| DKY63_RS21180 () | 4513347..4514618 | - | 1272 | WP_110965869.1 | ATP-binding protein | - |
| DKY63_RS21185 () | 4514830..4515054 | - | 225 | WP_110965870.1 | hypothetical protein | - |
| DKY63_RS21195 () | 4515955..4517184 | - | 1230 | WP_110965871.1 | methyltransferase | - |
| DKY63_RS21200 () | 4517165..4517854 | - | 690 | WP_110965872.1 | ABC transporter permease | - |
| DKY63_RS21205 () | 4517851..4518546 | - | 696 | WP_110965873.1 | ABC transporter permease | - |
| DKY63_RS21210 () | 4518625..4519371 | - | 747 | WP_110965874.1 | ABC transporter substrate-binding protein | - |
| DKY63_RS21215 () | 4519385..4520158 | - | 774 | WP_110965875.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| DKY63_RS21220 () | 4520723..4522114 | + | 1392 | WP_110965876.1 | GABA permease | - |
| DKY63_RS21225 () | 4522205..4522612 | - | 408 | WP_110965877.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| DKY63_RS21230 () | 4522612..4522842 | - | 231 | WP_110965878.1 | antitoxin | Antitoxin Detail |
| DKY63_RS21235 () | 4523011..4523460 | - | 450 | WP_110965879.1 | hypothetical protein | - |
| DKY63_RS21240 () | 4523467..4523883 | - | 417 | WP_110965880.1 | hypothetical protein | - |
| DKY63_RS21245 () | 4523920..4524894 | - | 975 | WP_110965881.1 | alpha/beta fold hydrolase | - |
| DKY63_RS21250 () | 4524966..4526018 | - | 1053 | WP_110965882.1 | DUF1016 family protein | - |
| DKY63_RS21255 () | 4526280..4526729 | + | 450 | WP_110965883.1 | carboxypeptidase regulatory-like domain-containing protein | - |
| DKY63_RS21265 () | 4527000..4527272 | - | 273 | WP_110965884.1 | oxidative damage protection protein | - |
| DKY63_RS21270 () | 4527269..4528336 | - | 1068 | WP_110965885.1 | A/G-specific adenine glycosylase | - |
| DKY63_RS21275 () | 4528333..4530561 | - | 2229 | WP_110965886.1 | AsmA family protein | - |
| DKY63_RS21280 () | 4530640..4531044 | - | 405 | WP_110965887.1 | acetyl-CoA sensor PanZ family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|