MGE detailed information
MGE type: Conjugative plasmid MGE length: 78329 bp
Accession: NZ_CP029691 Location: 1..78329 Organism: Escherichia coli strain SD134209 Replicon: plasmid pSD134209-2
Accession: NZ_CP029691 Location: 1..78329 Organism: Escherichia coli strain SD134209 Replicon: plasmid pSD134209-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DL800_RS01110 () | 13..870 | + | 858 | WP_000130993.1 | incFII family plasmid replication initiator RepA | - |
| DL800_RS01125 () | 1573..1833 | + | 261 | WP_001344604.1 | hypothetical protein | - |
| DL800_RS01130 () | 1846..2085 | + | 240 | WP_000859016.1 | MarR family transcriptional regulator | - |
| DL800_RS01135 () | 2289..3476 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| DL800_RS01140 () | 3476..3841 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| DL800_RS01145 () | 3876..4130 | - | 255 | WP_000997720.1 | hypothetical protein | - |
| DL800_RS01155 () | 4637..8602 | - | 3966 | WP_001034091.1 | Serine protease EspP | VF |
| DL800_RS01170 () | 10188..11117 | + | 930 | Protein_9 | Catalase-peroxidase | VF |
| DL800_RS01175 () | 11161..11550 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| DL800_RS01180 () | 11664..12430 | + | 767 | Protein_11 | IS3 family transposase | - |
| DL800_RS01185 () | 12510..12905 | - | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| DL800_RS01190 () | 12905..13864 | - | 960 | WP_000921961.1 | plasmid segregation protein ParM | - |
| DL800_RS01195 () | 14137..15039 | + | 903 | WP_077629034.1 | DUF1281 domain-containing protein | - |
| DL800_RS01200 () | 15036..15348 | + | 313 | Protein_15 | hypothetical protein | - |
| DL800_RS01205 () | 15424..15795 | + | 372 | WP_000086162.1 | restriction endonuclease subunit M | - |
| DL800_RS01210 () | 15902..17089 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| DL800_RS01215 () | 17089..17454 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| DL800_RS01230 () | 17827..18129 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| DL800_RS01235 () | 18176..18598 | + | 423 | WP_000271680.1 | DUF1380 family protein | - |
| DL800_RS01240 () | 18595..18786 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| DL800_RS30355 () | 19062..19286 | - | 225 | WP_013279293.1 | hypothetical protein | - |
| DL800_RS01255 () | 19824..20054 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| DL800_RS01260 () | 20106..21467 | + | 1362 | WP_000170683.1 | DUF3560 domain-containing protein | - |
| DL800_RS01265 () | 21514..22076 | + | 563 | Protein_25 | class I SAM-dependent methyltransferase | - |
| DL800_RS01275 () | 22228..22488 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| DL800_RS01295 () | 22961..23488 | + | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| DL800_RS01300 () | 23544..23777 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| DL800_RS01305 () | 23836..25794 | + | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| DL800_RS01310 () | 25849..26283 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| DL800_RS01315 () | 26280..26999 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| DL800_RS30360 () | 27011..27199 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 27011..27235 | + | 225 | NuclAT_0 | - | - |
| - () | 27011..27235 | + | 225 | NuclAT_0 | - | - |
| - () | 27011..27235 | + | 225 | NuclAT_0 | - | - |
| - () | 27011..27235 | + | 225 | NuclAT_0 | - | - |
| - () | 27168..27233 | + | 66 | - | - | Antitoxin Detail |
| DL800_RS01320 () | 27279..27437 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| DL800_RS30365 () | 27791..28015 | - | 225 | WP_001427866.1 | hypothetical protein | - |
| DL800_RS01340 () | 28359..28646 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| DL800_RS01345 () | 28767..29588 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| DL800_RS01350 () | 29885..30394 | - | 510 | Protein_37 | transglycosylase SLT domain-containing protein | - |
| DL800_RS01355 () | 30808..31191 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| DL800_RS01360 () | 31378..32067 | + | 690 | WP_000283394.1 | conjugal transfer transcriptional regulator TraJ | - |
| DL800_RS01365 () | 32166..32561 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| DL800_RS01370 () | 32594..32953 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| DL800_RS01375 () | 32968..33279 | + | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| DL800_RS01380 () | 33301..33867 | + | 567 | WP_000399800.1 | type IV conjugative transfer system protein TraE | - |
| DL800_RS01385 () | 33878..34582 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| DL800_RS01390 () | 34582..36009 | + | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| DL800_RS01395 () | 35999..36589 | + | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| DL800_RS01400 () | 36576..36698 | + | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| DL800_RS01405 () | 36679..37278 | + | 600 | Protein_48 | conjugal transfer protein TraH | - |
| DL800_RS01410 () | 37275..38438 | + | 1164 | Protein_49 | conjugal transfer mating pair stabilization protein TraG | - |
| DL800_RS01420 () | 39746..41413 | + | 1668 | Protein_51 | conjugal transfer protein TraG | - |
| DL800_RS01425 () | 41410..41919 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| DL800_RS01430 () | 41933..42664 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| DL800_RS01435 () | 42917..45070 | + | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| DL800_RS01440 () | 45070..50340 | + | 5271 | WP_000986985.1 | Multifunctional conjugation protein TraI | Relaxase |
| DL800_RS01445 () | 50360..51106 | + | 747 | WP_000205714.1 | conjugal transfer pilus acetylase TraX | - |
| DL800_RS01450 () | 51165..52025 | + | 861 | WP_000704529.1 | putative protein YcjY | VF |
| DL800_RS01455 () | 52128..52688 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| DL800_RS01460 () | 52829..53218 | + | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01465 () | 53215..53563 | + | 349 | Protein_60 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01470 () | 53613..55151 | + | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01475 () | 55190..55843 | + | 654 | Protein_62 | IS3 family transposase ISEc48 | Transposase |
| DL800_RS01480 () | 55970..57409 | - | 1440 | WP_001213544.1 | Hemolysin secretion protein D, chromosomal | VF |
| DL800_RS01485 () | 57413..59533 | - | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| DL800_RS01490 () | 59583..62579 | - | 2997 | WP_032350743.1 | Hemolysin, chromosomal | VF |
| DL800_RS01495 () | 62581..63096 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| DL800_RS01505 () | 63619..64115 | - | 497 | Protein_67 | IS3 family transposase IS629 | Transposase |
| DL800_RS01510 () | 64206..64571 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| DL800_RS01515 () | 64571..65758 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| DL800_RS01520 () | 65947..66099 | - | 153 | Protein_70 | IS3 family transposase IS1203 | Transposase |
| DL800_RS01530 () | 67571..68392 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| DL800_RS01535 () | 68392..69498 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| DL800_RS01540 () | 69592..71313 | + | 1722 | WP_000550555.1 | phosphoethanolamine transferase CptA | - |
| DL800_RS01545 () | 71387..72385 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| DL800_RS01550 () | 72438..72626 | + | 189 | Protein_75 | hypothetical protein | - |
| DL800_RS01555 () | 72689..74227 | - | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01560 () | 74277..74625 | - | 349 | Protein_77 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01565 () | 74622..75011 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01570 () | 75094..75627 | + | 534 | Protein_79 | IS66 family transposase ISEc8 | Transposase |
| DL800_RS01575 () | 75745..75957 | + | 213 | WP_001369432.1 | ANR family transcriptional regulator | - |
| DL800_RS01580 () | 76202..76663 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| DL800_RS01585 () | 76709..76918 | + | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| DL800_RS01590 () | 76956..77543 | + | 588 | WP_000766809.1 | DUF2726 domain-containing protein | - |
| DL800_RS01595 () | 77783..78040 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|