MGE detailed information
MGE type: Prophage MGE length: 52003 bp
Accession: NZ_CP029658 Location: 1434491..1486493 Organism: Staphylococcus aureus strain AR_0467 Replicon: chromosome
Accession: NZ_CP029658 Location: 1434491..1486493 Organism: Staphylococcus aureus strain AR_0467 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC52_RS07790 () | 1429661..1430392 | + | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| CSC52_RS07795 () | 1430385..1430927 | + | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| CSC52_RS07800 () | 1430920..1431657 | + | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| CSC52_RS07805 () | 1431790..1432515 | + | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| CSC52_RS07810 () | 1432496..1434247 | + | 1752 | WP_000987774.1 | two-component system sensor histidine kinase SrrB | - |
| CSC52_RS07815 () | 1434491..1435417 | + | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| CSC52_RS07820 () | 1435410..1437437 | + | 2028 | Protein_1430 | hypothetical protein | - |
| CSC52_RS07825 () | 1437480..1438685 | - | 1206 | WP_110184198.1 | site-specific integrase | - |
| CSC52_RS07830 () | 1438811..1439425 | + | 615 | WP_000191464.1 | hypothetical protein | - |
| CSC52_RS07835 () | 1439422..1439568 | - | 147 | WP_001795334.1 | hypothetical protein | - |
| CSC52_RS07840 () | 1439605..1439787 | - | 183 | WP_000705240.1 | hypothetical protein | - |
| CSC52_RS07845 () | 1439883..1440803 | - | 921 | WP_000348133.1 | 3'-5' exoribonuclease | - |
| CSC52_RS07850 () | 1440819..1441433 | - | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| CSC52_RS07855 () | 1441605..1441832 | + | 228 | WP_001030311.1 | hypothetical protein | - |
| CSC52_RS07860 () | 1441858..1442413 | + | 556 | Protein_1438 | phage antirepressor KilAC domain-containing protein | - |
| CSC52_RS07865 () | 1442429..1442647 | + | 219 | WP_001001383.1 | hypothetical protein | - |
| CSC52_RS07870 () | 1442697..1442942 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| CSC52_RS07875 () | 1442911..1443276 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| CSC52_RS07880 () | 1443331..1443546 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| CSC52_RS07885 () | 1443571..1443834 | + | 264 | WP_001124157.1 | helix-turn-helix domain-containing protein | - |
| CSC52_RS07890 () | 1443847..1444008 | + | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| CSC52_RS07895 () | 1444087..1444410 | + | 324 | WP_000174998.1 | hypothetical protein | - |
| CSC52_RS07900 () | 1444425..1444787 | + | 363 | WP_000985971.1 | hypothetical protein | - |
| CSC52_RS07905 () | 1444784..1445956 | + | 1173 | WP_110184199.1 | DUF2800 domain-containing protein | - |
| CSC52_RS07910 () | 1445974..1446527 | + | 554 | Protein_1448 | DUF2815 family protein | - |
| CSC52_RS07915 () | 1446593..1448538 | + | 1946 | Protein_1449 | DNA polymerase | - |
| CSC52_RS07920 () | 1448551..1448735 | + | 185 | Protein_1450 | DUF3113 family protein | - |
| CSC52_RS07925 () | 1448735..1449136 | + | 402 | WP_001624708.1 | PVL family protein | - |
| CSC52_RS07930 () | 1449136..1449389 | + | 254 | Protein_1452 | DUF3310 domain-containing protein | - |
| CSC52_RS07935 () | 1449389..1449637 | + | 249 | WP_072533861.1 | phi PVL orf 51-like protein | - |
| CSC52_RS07940 () | 1449701..1450148 | + | 448 | Protein_1454 | hypothetical protein | - |
| CSC52_RS07945 () | 1450145..1450510 | + | 366 | WP_001624703.1 | hypothetical protein | - |
| CSC52_RS07950 () | 1450503..1450757 | + | 255 | WP_001624702.1 | DUF1024 family protein | - |
| CSC52_RS07955 () | 1450744..1450914 | + | 171 | WP_000714413.1 | hypothetical protein | - |
| CSC52_RS07960 () | 1450907..1451443 | + | 537 | WP_001624699.1 | dUTPase | - |
| CSC52_RS07965 () | 1451480..1451686 | + | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| CSC52_RS07970 () | 1451683..1451886 | + | 204 | WP_000141259.1 | hypothetical protein | - |
| CSC52_RS07975 () | 1451902..1452114 | + | 213 | WP_110184200.1 | hypothetical protein | - |
| CSC52_RS07980 () | 1452104..1452493 | + | 390 | WP_001596346.1 | hypothetical protein | - |
| CSC52_RS07985 () | 1452490..1452660 | + | 171 | WP_110184201.1 | transcriptional activator RinB | - |
| CSC52_RS07990 () | 1452709..1452909 | + | 201 | WP_000265252.1 | DUF1514 family protein | - |
| CSC52_RS08000 () | 1453197..1455633 | + | 2437 | Protein_1465 | virulence-associated E family protein | - |
| CSC52_RS08005 () | 1455742..1455840 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| CSC52_RS08010 () | 1455974..1456264 | + | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| CSC52_RS08015 () | 1456245..1457612 | + | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| CSC52_RS08020 () | 1457625..1458062 | + | 438 | WP_000513699.1 | transcriptional regulator | - |
| CSC52_RS08025 () | 1458219..1458533 | + | 315 | WP_000160689.1 | HNH endonuclease | - |
| CSC52_RS08030 () | 1458662..1458967 | + | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CSC52_RS08035 () | 1458957..1460648 | + | 1692 | WP_000153555.1 | terminase large subunit | - |
| CSC52_RS08040 () | 1460653..1461891 | + | 1239 | WP_001100671.1 | phage portal protein | - |
| CSC52_RS08045 () | 1461875..1462648 | + | 774 | WP_110184202.1 | Clp protease ClpP | - |
| CSC52_RS08050 () | 1462660..1463823 | + | 1164 | WP_001142738.1 | phage major capsid protein | - |
| CSC52_RS08055 () | 1463892..1464170 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| CSC52_RS08060 () | 1464182..1464514 | + | 333 | WP_000395495.1 | hypothetical protein | - |
| CSC52_RS08065 () | 1464511..1464912 | + | 402 | WP_000110020.1 | hypothetical protein | - |
| CSC52_RS08070 () | 1464913..1465308 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CSC52_RS08075 () | 1465343..1465984 | + | 642 | WP_000807541.1 | tail protein | - |
| CSC52_RS08080 () | 1466076..1466531 | + | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CSC52_RS08085 () | 1466589..1466939 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| CSC52_RS08090 () | 1466981..1467139 | + | 159 | WP_110184203.1 | hypothetical protein | - |
| CSC52_RS15595 () | 1467153..1473335 | + | 6183 | Protein_1484 | phage tail tape measure protein | - |
| CSC52_RS08105 () | 1473335..1474159 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| CSC52_RS08110 () | 1474168..1475743 | + | 1576 | Protein_1486 | phage tail protein | - |
| CSC52_RS08115 () | 1475743..1476033 | + | 291 | WP_000179858.1 | hypothetical protein | - |
| CSC52_RS08120 () | 1476049..1477959 | + | 1911 | WP_110184204.1 | hypothetical protein | - |
| CSC52_RS08125 () | 1477959..1479424 | + | 1466 | Protein_1489 | phage baseplate upper protein | - |
| CSC52_RS08130 () | 1479408..1479797 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CSC52_RS08135 () | 1479790..1479954 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| CSC52_RS08140 () | 1480000..1480329 | + | 330 | WP_110184205.1 | DUF2951 family protein | - |
| CSC52_RS08145 () | 1480444..1480731 | + | 288 | WP_078369659.1 | phage holin | - |
| CSC52_RS08150 () | 1480742..1482185 | + | 1444 | Protein_1494 | N-acetylmuramoyl-L-alanine amidase | - |
| CSC52_RS08165 () | 1482902..1483117 | + | 216 | WP_000126131.1 | hypothetical protein | - |
| CSC52_RS08170 () | 1483207..1484112 | + | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| CSC52_RS08175 () | 1484170..1485066 | + | 897 | WP_000476354.1 | DUF1672 domain-containing protein | - |
| CSC52_RS15600 () | 1485078..1485483 | + | 406 | Protein_1498 | hypothetical protein | - |
| CSC52_RS08185 () | 1485537..1486493 | + | 957 | WP_000913227.1 | DUF1672 domain-containing protein | - |
| CSC52_RS08190 () | 1486895..1487440 | + | 546 | WP_001186912.1 | ECF transporter S component | - |
| CSC52_RS08195 () | 1487546..1487794 | - | 249 | WP_001151997.1 | ferredoxin | - |
| CSC52_RS08200 () | 1487902..1488855 | + | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| CSC52_RS08205 () | 1488845..1490224 | + | 1380 | WP_000902099.1 | ATP-dependent DNA helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|