MGE detailed information
MGE type: Prophage MGE length: 63359 bp
Accession: NZ_CP029657 Location: 1566204..1629562 Organism: Staphylococcus aureus strain AR_0468 Replicon: chromosome
Accession: NZ_CP029657 Location: 1566204..1629562 Organism: Staphylococcus aureus strain AR_0468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC53_RS07985 () | 1561527..1561775 | + | 249 | WP_001151997.1 | ferredoxin | - |
| CSC53_RS07990 () | 1561881..1562426 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| CSC53_RS07995 () | 1562828..1563784 | - | 957 | WP_000913227.1 | DUF1672 domain-containing protein | - |
| CSC53_RS15560 () | 1563838..1564243 | - | 406 | Protein_1464 | hypothetical protein | - |
| CSC53_RS08005 () | 1564255..1565151 | - | 897 | WP_000476354.1 | DUF1672 domain-containing protein | - |
| CSC53_RS08010 () | 1565209..1566114 | - | 906 | WP_000476865.1 | DUF1672 domain-containing protein | - |
| CSC53_RS08015 () | 1566204..1566419 | - | 216 | WP_000126131.1 | hypothetical protein | - |
| CSC53_RS08030 () | 1567141..1568595 | - | 1455 | WP_000909213.1 | N-acetylmuramoyl-L-alanine amidase | - |
| CSC53_RS08035 () | 1568606..1568908 | - | 303 | WP_000339146.1 | phage holin | - |
| CSC53_RS08040 () | 1569044..1569343 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| CSC53_RS08045 () | 1569389..1569553 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| CSC53_RS08050 () | 1569546..1569935 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| CSC53_RS08055 () | 1569935..1571401 | - | 1467 | WP_031837459.1 | BppU family phage baseplate upper protein | - |
| CSC53_RS08060 () | 1571401..1573311 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| CSC53_RS08065 () | 1573327..1573617 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| CSC53_RS08070 () | 1573617..1575200 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| CSC53_RS08075 () | 1575209..1576033 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| CSC53_RS08080 () | 1576033..1582233 | - | 6201 | WP_108720653.1 | phage tail tape measure protein | - |
| CSC53_RS08085 () | 1582247..1582405 | - | 159 | WP_108720645.1 | hypothetical protein | - |
| CSC53_RS08090 () | 1582447..1582797 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| CSC53_RS08095 () | 1582855..1583310 | - | 456 | WP_000169127.1 | Ig domain-containing protein | - |
| CSC53_RS08100 () | 1583402..1584043 | - | 642 | WP_000807541.1 | tail protein | - |
| CSC53_RS08105 () | 1584078..1584473 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| CSC53_RS08110 () | 1584474..1584875 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| CSC53_RS08115 () | 1584872..1585204 | - | 333 | WP_000395495.1 | hypothetical protein | - |
| CSC53_RS08120 () | 1585216..1585494 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| CSC53_RS08125 () | 1585563..1586726 | - | 1164 | WP_001142738.1 | phage major capsid protein | - |
| CSC53_RS08130 () | 1586758..1587510 | - | 753 | WP_110409207.1 | Clp protease ClpP | - |
| CSC53_RS08135 () | 1587494..1588732 | - | 1239 | WP_001100671.1 | phage portal protein | - |
| CSC53_RS08140 () | 1588737..1590427 | - | 1691 | Protein_1490 | terminase large subunit | - |
| CSC53_RS08145 () | 1590417..1590722 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| CSC53_RS08150 () | 1590851..1591165 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| CSC53_RS08155 () | 1591322..1591759 | - | 438 | WP_000513699.1 | transcriptional regulator | - |
| CSC53_RS08160 () | 1591772..1593139 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| CSC53_RS08165 () | 1593120..1593410 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| CSC53_RS08170 () | 1593544..1593642 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| CSC53_RS08175 () | 1593751..1596198 | - | 2448 | WP_000884870.1 | virulence-associated E family protein | - |
| CSC53_RS08185 () | 1596486..1596686 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| CSC53_RS08190 () | 1596754..1596906 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| CSC53_RS08195 () | 1596903..1597292 | - | 390 | WP_001596346.1 | hypothetical protein | - |
| CSC53_RS08200 () | 1597282..1597518 | - | 237 | WP_000608283.1 | hypothetical protein | - |
| CSC53_RS08205 () | 1597511..1597714 | - | 204 | WP_000141259.1 | hypothetical protein | - |
| CSC53_RS08210 () | 1597711..1597917 | - | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| CSC53_RS08215 () | 1597954..1598490 | - | 537 | WP_001624699.1 | dUTPase | - |
| CSC53_RS08220 () | 1598483..1598653 | - | 171 | WP_000714413.1 | hypothetical protein | - |
| CSC53_RS08225 () | 1598640..1598894 | - | 255 | WP_001624702.1 | DUF1024 family protein | - |
| CSC53_RS08230 () | 1598887..1599252 | - | 366 | WP_001624703.1 | hypothetical protein | - |
| CSC53_RS08235 () | 1599249..1599698 | - | 450 | WP_000982708.1 | hypothetical protein | - |
| CSC53_RS08240 () | 1599763..1600011 | - | 249 | WP_072533861.1 | phi PVL orf 51-like protein | - |
| CSC53_RS08245 () | 1600011..1600265 | - | 255 | WP_001624706.1 | DUF3310 domain-containing protein | - |
| CSC53_RS08250 () | 1600265..1600666 | - | 402 | WP_001624708.1 | PVL family protein | - |
| CSC53_RS08255 () | 1600666..1600851 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| CSC53_RS08260 () | 1600864..1602816 | - | 1953 | WP_001802096.1 | DNA polymerase | - |
| CSC53_RS08265 () | 1602884..1603441 | - | 558 | WP_000645048.1 | DUF2815 family protein | - |
| CSC53_RS08270 () | 1603467..1604633 | - | 1167 | WP_000762530.1 | DUF2800 domain-containing protein | - |
| CSC53_RS08275 () | 1604630..1604992 | - | 363 | WP_000985971.1 | hypothetical protein | - |
| CSC53_RS08280 () | 1605007..1605330 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| CSC53_RS08285 () | 1605409..1605570 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| CSC53_RS08290 () | 1605583..1605846 | - | 264 | WP_001124157.1 | helix-turn-helix domain-containing protein | - |
| CSC53_RS08295 () | 1605871..1606086 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| CSC53_RS08300 () | 1606141..1606506 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| CSC53_RS08305 () | 1606475..1606720 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| CSC53_RS08310 () | 1606770..1606988 | - | 219 | WP_001001383.1 | hypothetical protein | - |
| CSC53_RS08315 () | 1607004..1607559 | - | 556 | Protein_1524 | phage antirepressor KilAC domain-containing protein | - |
| CSC53_RS08320 () | 1607585..1607812 | - | 228 | WP_001030311.1 | hypothetical protein | - |
| CSC53_RS08325 () | 1607984..1608598 | + | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| CSC53_RS08330 () | 1608614..1609534 | + | 921 | WP_000348133.1 | 3'-5' exoribonuclease | - |
| CSC53_RS08335 () | 1609630..1609812 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| CSC53_RS08340 () | 1609849..1609995 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| CSC53_RS08345 () | 1609992..1610606 | - | 615 | WP_000191464.1 | hypothetical protein | - |
| CSC53_RS08350 () | 1610732..1611937 | + | 1206 | WP_000264751.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| CSC53_RS08355 () | 1611980..1614007 | - | 2028 | WP_001558502.1 | hypothetical protein | - |
| CSC53_RS08360 () | 1614000..1614926 | - | 927 | WP_001557355.1 | DUF1672 domain-containing protein | - |
| CSC53_RS08365 () | 1615170..1616921 | - | 1752 | WP_000987774.1 | two-component system sensor histidine kinase SrrB | - |
| CSC53_RS08370 () | 1616902..1617627 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| CSC53_RS08375 () | 1617760..1618497 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| CSC53_RS08380 () | 1618490..1619032 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| CSC53_RS08385 () | 1619025..1619756 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| CSC53_RS08390 () | 1619848..1620354 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| CSC53_RS08395 () | 1620432..1621319 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CSC53_RS08400 () | 1621368..1621817 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| CSC53_RS08405 () | 1621922..1622464 | - | 543 | WP_000365240.1 | NUDIX hydrolase | - |
| CSC53_RS08410 () | 1622546..1623454 | + | 909 | WP_001171335.1 | aldo/keto reductase | - |
| CSC53_RS08415 () | 1623670..1623918 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| CSC53_RS08420 () | 1623934..1624689 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| CSC53_RS08425 () | 1624831..1625646 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| CSC53_RS08430 () | 1625749..1626669 | - | 921 | WP_000454063.1 | ribonuclease Z | - |
| CSC53_RS08435 () | 1626982..1628466 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| CSC53_RS08440 () | 1628696..1629562 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| CSC53_RS08445 () | 1629644..1631293 | - | 1650 | WP_001041912.1 | alpha-glucosidase | - |
| CSC53_RS08450 () | 1631309..1632328 | - | 1020 | WP_000256319.1 | LacI family DNA-binding transcriptional regulator | - |
| CSC53_RS08455 () | 1632329..1632583 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| CSC53_RS08460 () | 1632522..1632893 | - | 372 | WP_000413436.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|